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72 Cards in this Set

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What is a mutation?

An affected change in the DNA sequence that goes through replication

What is a lesion?

An affected change in the DNA sequence before replication

What is a chromosomal mutation?

Large deletions, duplications, inversions, and translocations

What is a point mutation?

A substitution of one base pair for another

What is a transposition mutation?

Mobile DNA (transposons) that can move from place to place in the genome

What is a gene mutation?

A change within a gene region of the DNA

What is a Germ Line Mutation?

A change within DNA that will be passed to the next generation

What is a somatic mutation?

A change within cells that are not non-reproductive cells

What is a transition mutation?

A type of point mutation that causes a base change that keeps it as it's original molecule

Purine to Purine

What is a transversion point mutation?

A type of point mutation that causes a base change that changes the molecule

A purine to a pyrimidine

What does no mutation mean?

The wild type protein is produced

What is a missense mutation?

The new codon encodes a different amino acid

What is a nonsense mutation?

The new codon is a stop codon

What is a silent mutation?

The new codon encodes the same amino acid

True or False


Mutations always have a phenotypic consequence.

False

What does change in size and sequence of chromatin do?

It may alter the structure of chromatin at that mutation.

What are the types of molecularly affected mutations?

Transition, transversion, missense nonsense, silent, neutral, and frameshift

What is a frameshift mutation?

Put triplet code out of register which leads to incorrect translation

What are the types of phenotypically affected mutations?

Loss-of-function, null mutation, gain-of-function, conditional, lethal, forward, reverse, and suppressor.

What is the loss-of-function mutation?

A change that produces a reduced function for the gene product

What is a null mutation?

A change that leads to complete loss of a gene product's function

What is a gain-of-function mutation?

A change that produces a new or enhanced function for the gene product

What is a conditional function?

A phenotypic expression that depends on context

What is a lethal mutation?

The mutation is deadly to the cell or organism

What is a forward mutation?

A mutation going from the wild type to the mutant

What is a reverse mutation?

A mutation going from the mutant type to the wild type

What is a suppressor mutation?

A change at a different site from the original mutation that suppresses the mutant phenotype

What is an intragenic suppressor?

It alters a second site in the gene to compensate for the first mutation

What is an intergenic suppressor?

It alters a different gene to suppress the mutant phenotype

What types of DNA repair is there?

Nonhomologous end-joining, & homologous recombination

What is Nonhomologous End-joining?

Quickly removes damaged DNA ends but does not restore the original sequence of DNA and doesn't require a second DNA as a template

What is Homologous Recombination?

Slowly, nearly precise repair to restore the original DNA sequence but it does require a 2nd copy as a repair template

What's the definition of population genetics?

The study of patterns, variation, and changes in allele frequencies in groups of interbreeding individuals

What is a gene pool?

The set of shared alleles of an interbreeding group

What is microevolution?

Changes in allele frequencies in the gene pool overtime

True or False?


Allele frequencies may be different in populations.

False

True or False?


Populations may look very different phenotypically

True

How do you determine genotype frequencies?

Count each genotype in the population and divide by the total number of individuals

How do you determine allele frequencies?

Either genotype counts or from genotypic frequencies

How are allele frequencies designated?

P, Q, and R

How many assumptions does the Hardy-Weinberg Equilibrium need?

5

What are the 5 assumptions that are needed for Hardy-Weinberg Equilibrium?

Infinitely large population size, completely random mating, no mutations, no migration and no selection

What does it mean when the assumptions of the Hardy-Weinberg Equilibrium are met

P+Q=1

What happens after one generation after the Hardy-Weinberg Equilibrium?

P^2+2PQ+q^2 = 1

What does p and q mean for the Hardy-Weinberg Equilibrium?

They are the homozygotes

What does pq mean in the Hardy-Weinberg Equilibrium?

They are the heterozygotes

True or False?


allele frequencies change after establishments through generations?

False

True or false?


Genotype frequencies are established after one generation of random mating and does not change after?

True

How are rare recessive alleles are maintained?

They are maintained as part of the carriers

What is variation?

A necessary component for microevolution of populations

Where do you find genetic variation?

External whole organism phenotype, proteins, and DNA sequences

What should you observe for genetic variation for external whole organism phenotype?

Codominant and incompletely dominant traits allow heterozygotes to be recognized

What should you observe for genetic variation in proteins?

As little as single amino acid changes can be detected between individuals

What should you observe for genetic variation in DNA sequences?

A single nucleotide can be the difference between individuals and is much more sensitive to detect differences than proteins or external phenotypes

What may happen with variations at the protein level?

There may not be any functional consequences

What are synonymous changes in proteins?

Codon changes does not alter the amino acid in the protein

What are non-synonymous changes in proteins?

Codon changed alters the amino acid to another amino acid or to termination of the protein and may have functional consequences

What is mutagenesis?

The process of making changes in DNA

What are the two types of mutagenic agents?

Spontaneous mutations, and induced mutations

How does spontaneous mutations happen?

Damage incurred via cellular processes

What does DNA replication errors do?

Can lead to mutations

What are tautomers?

Each of the four DNA bases exists in different chemical forms

True or false?


Rare pairings have been supported to cause mutations.

False

What is wobble?

Normal, protonated and other forms of the bases are able to pair because of flexibility in the DNA helical structures

What are 2 errors caused from base pairing?

Incorporated errors and Replicated errors

What is an incorporated error?

When a mispaired base has been incorporated into a newly synthesized nucleotide chain

What is a replicated error?

When the one bad strand is made into a new DNA and becomes a permanent mutation

What were the two spontaneous chemical changes?

Depurination and deamination

What is depurination?

The loss of a purine base from a nucleotide

How does depurination happen?

When a covalent bond between C1 of the deoxyribose and the purine base is broken, resulting in an apurinic site

What is deaminaton?

The loss of an amino group from a base.

What often happens in deamination?

Often a C turns into an U which is often is recognized and switched back by the cell repair system