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12 Cards in this Set

  • Front
  • Back

DNA replication requires DNA Polymerase

DNA Polymerase


- catalysed step by step addition of deoxyribonucleotide units to DNA


- New DNA assembled on template DNA


- Requires primmer (with free 3’-OH) to begin synthesis


- New DBA grows at 3’ (synthesis is 5’ to 3’)


DNA Replication

DNA template


Primase


RNA primer


DNA Polymerase


Newly synthesised DNA

Strands in DNA replication

Second (anti parallel) strand of DNA is synthesised in fragments called OKAZAKI FRAGMENTS in a 5’ to 3’ direction.


Fragments are joined together by ligase

Types of RNA and RNA Polymerases

mRNA


Template for protein synthesis


RNA polymerase 2 [Pol 2]


ATP dependent


tRNA


Carries activated amino acids to ribosomes


RNA polymerase 3 [Pol 3]


rRNA


Major component of Ribosomes


RNA polymerase 1 [Pol 1]



All require template DNA, ribonucleotides and a divalent metal ion (Mg+)

RNA Synthesis Steps

Initiation


RNA polymerase 2 and transcription factors assemble at promoter; RNA synthesis begins


Elongation


RNA polymerase 2 moves alone template strand as a RNA molecule grows in a 5’ to 3’ direction


Termination


RNA molecule completed and stabilised by modifications

Initiation step

Pol 2 bunds to a specific region of DNA - the PROMOTER


TATA box [-25]


CAAT box [-75]


GC box

Other RNA Pols and their Specific Promoters

Pol 1 : UPE (upstream Promoter Element) and rInr


Pol 3 : type 1 5sRNA


type 2 tRNA

How does RNA Polymerase read DNA

RNA Polymerase must unwind the DNA to allow the template strand to be read [unwound DNA usually 17bp open]

What is Required for Initation?

Transcription Factors are also required, assembled in a complex with “mediator”


Phosphorylation of Pol 2 allows it to move along the template

Elongation Step

RNA molecule grows 5’ to 3’


(new nucleotides added to 3’)

Termination and Modification Step

Modifications provide stability to RNA molecule


Requires 5’ cap and a Poly A Tail

Translation


[Synthesis of Protein]

m