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85 Cards in this Set

  • Front
  • Back

Clone

A population of cells derived from a single cell

Strain

Genetically different cells contained within a clone (colony)

Classification of Viruses

Viruses are not placed in a kingdom. They are not composed of cells and cannot grow without a host cell.A viral species is a population of viruses with similar characteristics that occupies a particular ecological niche.

pH requirements for growth

Most bacteria between pH 6.5 and 7.5


Molds and yeasts grow between 5 and 6


Acidophiles grow in acidic environments

Prokaryotic species

A population of cells with similar characteristics

Culture

Any culture medium grown in laboratory media

Culture

Any culture medium grown in laboratory media

Why don't viruses fit into the taxonomical hierarchy structure?

- Not technically a living organism


- No RNA


- Acellular

Biofilms

Microbes adhere to surfaces and accumulate on solid surfaces in contact with water.


- biofilm a form on teeth, contact lenses, medical implants, etc.


- microbes in biofilms are more resistant to antibiotics then free-swimming microbes

How do microbes grow?

They always stay about the same size.



Divide into equal daughter cells.


- Population of clones with a few random mutations.

What causes plasmolysis?

Hypertonic environments, or an increase in salt or sugar.


*cytoplasm shrinks

What chemicals are needed for life to survive?

Carbon


Nitrogen


Sulfur


Phosphorous


Trace Elements

Fastidious organisms

Organisms that require many growth factors

Capnophiles

Microbes that require high CO2 conditions

Selective Media




Enrichment Culture

1) Suppress unwanted microbes and encourage desired microbes




2) Encourages growth of desired microbe

Why does a colony not grow to an infinite size, or at least fill the confines of the Petri plate?

Competition for limited resources does not allow unlimited growth

Nonsense mutation

Premature termination of polypeptide

Missense mutation

Incorrect amino acid substituted

Silent mutation

No change in amino acid sequence

Induction

The process that turns on the transcription of a gene.

Death phase

The period of logarithmic decrease in a bacterial population; also called logarithmic decline phase.

rRNA

Ribosomal RNA


The type of RNA that forms ribosomes

Horizontal Gene Transfer

Transfer of genes between two organisms in the same generation.

Vertical Gene Transfer

Transfer of genes between two organisms in different generations.

Transformation

genes transferred from one bacteria to another as naked DNA

Obligate Anaerobe

An organism that does not use molecular oxygen (O2) and is killed in the presence of O2

Eukarya

All eukaryotes (animals, plants, fungi and protists); members of the Domain Eukarya

Phototroph

An organism that uses light as its energy source and carbon dioxide as its carbon source.

Aerotolerant Anaerobes

An organism that does not use molecular oxygen but is not affected by its presence.

Repressor

A protein that binds to the operator site to prevent transcription.

Promoter

The starting site on a DNA strand for transcription of RNA by RNA polymerase.

Archaea

Domain of prokaryotic cells lacking peptidoglycan; one of the three domains

Auxotroph

A mutant microorganism with a nutritional requirement that is absent in the parent.

Antisepsis

A chemical method for disinfection of the skin or mucous membranes; the chemical is called an antiseptic.

Semiconservative replication

The process of DNA replication in which each double-stranded DNA molecule contains one original strand and one new strand.

Mesophile

An organism that grows between about 10 degrees C and 50 degrees C; a moderate-temperature-loving microbe.


Humans

Sanitization

The removal of microbes from eating utensils and food preparation areas.

Generalized Transduction

The transfer of bacterial chromosome fragments from one cell to another by a bacteriophage.

Asepsis

The absence of contamination by unwanted organisms

Nonionizing radiation

Short-wavelength radiation that does not cause ionization; UV radiation as an example

Psychrophile

An organism that grows best at about 15degrees C and does not grow above 20 degrees C; a cold-loving microbe

log phase

The period of bacterial growth or logarithmic increase in cell numbers; also called exponential growth phase.

Base substitution

The replacement of a single base in DNA by another base, causing a mutation; also called point mutation.

Binary fission

Prokaryotic cell reproduction by division into two daughter cells

RNA primer

A short strand of RNA used to start synthesis of the lagging strand of DNA, and to start the polymerase chain reaction.

Nonsense mutation

A base substitution in DNA that results in a nonsense codon.

Inducer

A chemical or environmental stimulus that causes transcription of specific genes.

Catalase

An enzyme that breaks down hydrogen peroxide.

Microaerophile

An organism that grows best in an environment with less molecular oxygen than is normally found in air

Frameshift mutation

A mutation caused by the addition or deletion of one or more bases in DNA.




*extremely detrimental


- permissable only if an entire triplet is removed or added.


- Neutral mutation are permissable if triplet codes for the same triplet codon.

Obligate aerobe

An organism that requires molecular oxygen to live.

Sterilization

The removal of all microorganisms, including endospores.

Transduction

The transfer of DNA from one cell to another by a bacteriophage.

Autoclave

Equipment for sterilization by steam under pressure, usually operated at 15 psi and 121 degrees C.

Facultative anerobe

An organism that can grow with or without molecular oxygen.

mRNA

Messenger RNA


The type of RNA molecule that directs the incorporation of amino acids into proteins.

Stationary phase

The period in a bacterial growth curve when the number of cells dividing equals the number dying

Capnophiles

A microorganism that grows best at relatively high CO2 concentrations.

Nonsense codon

A codon that does not encode any amino acid

Plasmylosis

Loss of water from a cell in a hypertonic environment.

Repression

The process by which a repressor protein can stop the synthesis of a protein

Lagging strand

During DNA replication, the daughter strand that is synthesized discontinuously.

Lag phase

The time interval in a bacterial growth curve during which there is no growth.

thermophile

An organism whose optimum growth temperature is between 50 degrees C and 60 degrees C.




A heat loving microbe

DNA polymerase

Enzyme that synthesizes DNA by copying a DNA template.

Missense mutation

A mutation that results in the substitution of an amino acid in a protein.

Specialized transduction

The process of transferring a piece of a cell DNA adjacent to a prophage to another cell.

Hot air sterilization

Sterilization by the use of an oven at 170 degrees C for approximately 2 hours.

Disinfection

Any treatment used on inanimate objects to kill or inhibit the growth of microorganisms; a chemical used is called a disinfectant.

Photolyase

An enzyme that splits thymine dimers in the presence of visible light.

Operon

The operator and promoter sites and structural genes they control

Strain

Genetically different cells within a clone.

Bacterial Growth Curve Phases

1. Lag Phase - Intense activity prepping for pop. growth


2. Log Phase - Log or exponential increase in pop.


3. Stationary Phase - Period of equilibrium; deaths balance production of new cells


4. Death Phase - Pop. is decreasing at a logarithmic rate

Reproduction in Prokaryotes

Binary Fission - most


Budding - Yeast


Conidiospores - Fungi


Fragmentation of filaments

Fastidious

Organisms that require many growth factors

Krebs Cycles

Decarboxylation of pyruvic acid produces one CO2 molecule and one acetyl group. Two-carbon acetyl groups are oxidized in the Krebs cycle. Electrons are picked up by NAD+ and NAD for the ETC.


From one molecule of glucose, oxidation produces six molecules of NADH, two molecules of FADH2, and two molecules of ATP.

Alternatives to glycolysis

Pentose Phosphate Pathway


- Uses 5 carbon sugars




Entner-Doudoroff pathwayC

Cellular Respiration

ETC - Electron Transport Chain




- Does not always require O2


- ATP generated in ETC by oxidative phosphorlyation.

Fermentation

Releases energy from sugars or other organic molecules by oxidation.


O2 is not required




2 ATP molecules are produced.

How many ATP are produced by eukaryotes and prokaryotes?

Eukaryotes - 36 ATP molecules




Aerobic Prokaryotes - 38 ATP molecules

Direct Microscopic Count

Number of bacteria/ ml = # of cells counted/ Vol. of area counted

1. Degerming




2. Biocide/ Germicide




3. Bacteriostasis

1. removing microbes from a limited area.




2. Killing microbes




3. Inhibiting, not killing, microbes

Structure of Operon

Consists of the promoter and operator sites and structural genes that code for the protein.




the operon is regulated by the product of the regulatory gene.

1. Base Substitution




2. Missense mutation




3. Nonsense mutation




4. Frameshift mutation

1. Change in one base




2. Base substitution results in change in amino acid




3. Base substitution results in a nonsense codon.




4. Insertion or deletion of one or more nucleotide pairs.

Spontaneous mutations

occur in the absence of a mutagen.