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23 Cards in this Set

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Glycogen

Carbohydrate store in animals (glucose) - muscle and liver. Remobilised to provide energy production or allow lover to regulate blood glucose.


Highly branched polymer - alpha 1,4 links (chains) and alpha 1,6 links (branches). One unit of glucose can be released at a time due to branches). Stored as granules, with metabolic enzymes

The breakdown of glycogen

Glycogen phosphorylase (G1P) - remove glucose from the branches - up to 4 units from end of a branch. Each unit released as glucose 1 phosphate units.


Transferase -- moves the three glucose units to another branch to be broken down by G1P.


One residue left - broken down b debranching enzyme in form of glucose

Products of glycogen breakdown

Glucose (debranching enzyme) - minor product


Glucose-1-phosphate - phosphorylase and transferase enzyme. Converted to glucose-6-phosphate by phosphogucomytase to enter glycolysis pathways. Can be converted to glucose by glucose-6-phosphate.

Uses of glycogen breakdown products in liver and muscle

Liver - glucose 6 phosphate converted into glucose and released into blood. Presence of glucose-6-phosphatase


Muscle - glucose 6 phosphate powers glycolysis directly, glucose-6-phosphatase not present

Glycogen synthesis

Glucose-6-phosphate converted to Glucose-1-phosphate by phosphoglucamatase


Converted to UDP-glucose by UDP-glucose pyrophosphorylase. Pyrophosphate released.


Glycogen unit added to produce glycogen using enzyme glycogen synthase. UDP released.

The enzymes controlling breakdown and synthesis of glycogen

Breakdown - glycogen phosphorylase


Synthesis - glycogen synthase


Control mediated by metabolites and hormones

Glycogen breakdown in the liver

Glucagon released by pancreas in times of fasting, detected by specific membrane receptors.


Binds to receptors which activates adenylyl cyclase converting ATP to cAMP.


cAMP activates protein kinase A by binding to it. Active kinase A can add phosphate to inactive phosphorylase kinase-b forming active phosphorylase kinase - a (P). This adds phosphate to phosphorylase kinase - b forming phoshorylase - a (P). Catalyses conversion of glycogen to glucose -1-phosphate

Glycogen breakdown in muscle

Hormone used: adrenaline - adrenaline receptors on muscle. Same phosphorylation cascade occurs.


In both tissues - reversible covalent modification of enzyme occurs, covalent attachment of phosphate group. Enzymes switched on by phosphorylation - amplification occurs.

How is the pathway switched off?

Protein phosphatase 1 - inactivates the newly activated phosphorylase-a (P) enzyme. Reforms phosphorylase-b.


Occurs in both muscle and liver

Metabolite and hormonal control of glycogen breakdown

Phosphorylase kinase-a (P) activated by calcium ion, which signal for muscle contraction


AMP - activates phosphorylase-b. AMP rises as muscle contract as ATP used.

Metabolite and hormonal control of glycogen synthesis

Protein kinase a directly phosphorylates glycogen synthase (active enzyme) to form inactive glycogen synthase-P enzyme.


Same hormone can switch on glycogen breakdown and switch off glycogen synthesis - allows for perfect regulation.

Control of metabolism in muscle contraction

Exercise releases adrenaline, glycogen breakdown needed for glycolysis


Calcium ions (stimulate phosphorylase kinase) and AMP (stimulase phosphorylase -b) released from muscle.


Synchronises muscle contraction with glycogen breakdown

Control of metabolism - blood glucose

Low blood glucose - glucagon secreted, glycogen broken down in liver to release glucose


In times of plenty - phosphorylase a-(p) binds glucose in liver, inhibiting breakdown. Insulin levels high - promote uptake of glucose by GLUT4 and activated glycogen synthase. Glycogen phosphorylase activity low

Glycolysis

Degradation of 6C glucose to 3C pyruvate to produce ATP


Anaerobic, catabolic (6C to 3C) but also anabolic (biosynthetic intermediates to produce larger molecules).


Control - glucose transporters and control of enzymes

The stages of glycolysis and enzymes used

Glucose -> Glucose-6-phosphate by hexokinase -> fructose-6-phosphate -> fructose-1,6-bisphosphate by phosphofructokinase. Split into glyceraldehyde-3-phosphate and dihydroxyacetone phosphate.


Glyceraldehyde-3-phosphate converted to 1,3diphosphoglycerate, then to phosphoenolpyruvate. This converted to pyruvate by pyruvate kinase

Inhibitors of Phosphofructokinase

Fructose-6-phosphate to fructose-1,6-bisphosphate


Inhibited by ATP, allosteric binding and lowering affinity for F6P. High energy - so switch off glycolysis. Opposed by AMP (ATP decreases so glycolysis needs to increase).


Inhibited by citrate, enhances ATP effects. In TCA cycle, signals abundance of biosynthetic precursors.



Stimulators of phosphofructokinase

Fructose 2,6-bisphosphate - allosteric. In liver glucagon acts to reduce levels of F26BP and switch off glycolysis (blood glucose released into blood).


Made by enzyme phosphofructokinase 2: F6P + ATP -> F26P2 + ADP

Fructose-2,6,-bisphosphate

Liver enzyme - inhibited by cAMP, dependent on phosphorylation.


Heart muscle - adrenaline stimulates production of fructose-2,6-bisphosphate and stimulates glycolysis to power muscle contraction. Stimulated by cAMP

Hexokinase

Glucose to glucose-6-phosphate


Inhibited: glucose 6 phosphate (own product). If phosphofructokinase inhibited then G6P rises, prevents unnecessary conversion of glucose


Isoenzymes - different affinities for substrates (km values). 3 have low Km values but isoenzyme IV (glucokinase) has high Km value (found in liver). Not inhibited by G6P

Pyruvate kinase

Converts phosphoenolpyruvate to pyruvate


Allosteric - ATP inhibits (abundance of energy). F1,6BP stimulates, keeping glycolysis occurring. If F1,6BP increases it inhibits phosphofructokinase, feeding forward to pyruvate kinase so glycolysis happens quicker.


Hormonal - glucagon stimulates cAMP production, phosphorylates pyruvate kinase and inhibit it.

Chronic (longer term control of glycolysis)

Change in permanent diet - changes in pathways or production of certain enzymes


Insulin promotes synthesis of some glycolytic enzymes


Glucagon promotes synthesis of some gluconeogenic enzymes (create glucose).

Pyruvate dehydrogenase

Pyruvate + NAD + CoA -> acetylCoA + NADH + CO2 (acetyl CoA for TCA cycle).


Decarboxylation, not reversible, multiple controls.


Reversible covalent modification - cAMP independent


Exists in an active and inactive form

Regulation of pyruvate dehydrogenase

Inactivation - phosphorylated by kinase, forming PDH-P. Kinase enzyme regulated by acetyl coA, NADH and CO2


Activated - dephosphorylation by phosphatase. Calcium ions released in muscle contraction activates phosphatase - more pyruvate converted in the TCA cycle.