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15 Cards in this Set
- Front
- Back
What is the problem with packaging DNA?
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Huge amount of information (DNA) must be condensed into a very small package. But, also needs to be accessible during interphase for transcription/replication.
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Solution?
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Package the DNA in four discreet levels. more compact during mitosis, less when being used to encode proteins.
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What's going on with uncoiled proteins?
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Uncoiled chromatin. They're still attached to histone proteins (still in level 1 packaging).
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Level 1 of DNA packaging?
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Unless the DNA is being read, it always remains wrapped around histomes making nucleosomes.
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core of a nucleosome?
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8 histone proteins (4 pairs). Histones have a large # of positively charged amino acids on their surface... attracts the - charged DNA (the phosphates in DNA give it a negative charge).
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How does DNA wrap around the histones?
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Wraps around the 8 histones twice, and is bound by a 9th histone, called H1.
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Level 2?
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Due to the H1, the layer pushes onto itself, creating a double layer. This is the state that most G0 DNA is found in. Called a coiled coil or 30nm fibre.
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Level 3?
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Happens in prophase and prometaphase. Looped Domains - Loops of 30 nm fibres attached to a protein scaffold in the chromosome during mitosis
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Differences in level 3 between G0 cells and mitosis?
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In a G0 cell the protein scaffold lines the inner surface of nuclear envelop and also some in nucleoplasm.
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Level 4?
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Fully condensed chromosomes. Loops of 30 nm fibres on a protein scaffold make up Looped domains which, when further coiled make up fully condensed chromosome
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Differences between euchromatin and heterochromatin?
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Euch -- The 'accessible' DNA is kept in a less compact form
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Do simpler organisms have this divide?
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No, they have no need. They need all their DNA. A more complex organism (like us), needs to preferentially store things.
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How to differentiate euch from hetero in a cell?
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Euchromatin looks less dense or more light coloured in a cell nucleus.
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What does the nuclear lamina do? Nuclear matrix?
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it's a chromatin organizer.
Matrix: Additional protein 'web' throughout nucleus also organizes. |
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Do prokary (and archea) package DNA similiarly?
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No. Bacteria has large circular pieces for the genome that is condensed by physical twisting. Space is not as much of an issue for them .
Archea -- Have histosone like proteins, and something like nucleosomes, but nothing as complex, and that's as far as it goes. |