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99 Cards in this Set

  • Front
  • Back
What is "amphipathic" ?
Cell membrane proteins are typically amphipathic, meaning

they have both hydrophoblic (water fearing) and hydrophilic


(Water loving) regions.The hydrophobic regions consist of


non-polar amino acids that are stable in the hydrophobic


interior of the membrane, while the hydrophilic regions are


exposed to water and consist primarily of polar, or charged,


amino acids.

What is "active transport" ?

When energy is required for substances to cross the membrane the process is called "active transport" (ie. Sodium-Potassium pump):


The movement of a substance across a cell membrane against its


concentration gradient (from a region of lowconcentration on one side


of the membrane to a region ofhigh concentration on the other),


mediated by specific transport proteins and requiring an expenditure of energy

What is an "electrochemical gradient" ?
The inside of a cell is negatively charged relative to the outside.

Due to this positively charged ions are attracted to the


negatively charged chamber. The 2 factors, the difference in


electric charge and the difference in concentration creates an


electrochemical gradient, down which the ions flow


spontaneously.

What are "polar heads" ?

Cell membranes are complex, two-layered structures made


up of phospholipids.


Phospholipids are amphipathic, they have both hydrophilic


and hydrophobic parts. The hydrophilic part is also called


the "polar head", whereas the hydrophobic part is the


non-polar tail.



What is a "micelle" ?



Micelles are lipid molecules that arrange themselves in a spherical form in water due to the 
amphipathic nature of fatty acids, whereby the hydrophilic  heads of phospholipids face water molecules and the hydrophobic tails are forced together,...

Micelles are lipid molecules that arrange themselves in a spherical form in water due to the


amphipathic nature of fatty acids, whereby the hydrophilic heads of phospholipids face water molecules and the hydrophobic tails are forced together, away from the water.

What is a phospholipid bilayer ?


 Phospholipid bilayer form when 
2 sheets of phospholipid molecules align. The hydrophilic heads face the surrounding solution while the 
hydrophobic heads interact with each other inside the bilayer.



Phospholipid bilayer form when


2 sheets of phospholipid molecules align. The hydrophilic heads face the surrounding solution while the


hydrophobic heads interact with each other inside the bilayer.

what is an ester linkage ?

An ester linkage is a bond between a


hydroxyl group (--OH) and a carboxyl group (--COOH).


During the synthesis of a fat, three fatty acid


molecules are joined to glycerol by an ester linkage.

What are characteristics of the

hydroxyl group?

hydrophilic

(OH)


soluble

What are characteristics of

the Carbonyl group?

Carbon double bonded with oxygen


Hydrophilic


soluble

What are characteristics of the a

Carboxyl group?

a Carbonyl group and a hydroxyl group

hydrophilic


soluble


are acids/make something an acid


can donate a hydrogen ion

What is a polymer?
a long molecule consisting of many

similar building blocks


Carbohydrates (polysaccharides), Fats,


Proteins, Nucleic Acids

What is a monomer?

small building block molecules


Simple sugars (monosaccharides- gluclose,


fructose), fatty acids, amino acids, Nueotides

What are the 3 classes of organic


molecules that are polymers?

Carbohydrates


Proteins


Nucleic acids

What is osmosis ?

* A process by which molecules of a solvent tend to pass


through a semipermeable membrane from a less concentrated


solution into a more concentrated one, thus equalizing the


concentrations on each side of the membrane, forming an


equilibrium.


* the diffusion of free water across a selectively permeable membrane

What is tonicity ?

* the ability of a solution surrounding a cell to cause that cell to gain


or loose water.

* The ability of an extracellular solution to make water move

into or out of a cell by osmosis is know as its tonicity.


* A solution's tonicity is related to its osmolarity, which is


the total concentration of all solutes in the solution.



What is a fatty acid ?

Fatty acids and isoprene are the key building blocks of lipids.


They are primarily hydrophobic and consist


of a long (14-20C) hydrocarbon chain tail


bonded to a hydrophilic carboxyl (-COOH)


functional group.

What is glycerol ?

A three arbon molecule that forms


the backbone of fatty acids

What is selective permeable?

The property of a natural, or artificial, membrane that allows


passage of some molecules (such as small hydrophobic


molecules and small, uncharged polar molecules) but bars


passage of other molecules ( such as larger, uncharged


molecules, ie. sugar and ions, which have charges)

What is a solute?

Disolved molecules and ions

What is hypertonic ?

Having a higher concentration of solutes and a lower


concentration of water than a solution to which it is


being compared


Has more solute, and less water.


Water moves out of cell, cells will shrink

What is hypotonic ?

solute concentrations are lower in the extracellular fluid

less solute relative to what it is being compared to and


more water.


water diffuses into cells


Cells swell

What is isotonic ?

* Having the same concentration of solutes and water as a

solution to which it is being compared


* referring to a soultion that, when surrounding a cell, causes no net


movement of water into or out of a cell

What is a triacylglycerol?

3 fatty acids joined to glycerol by an ester linkage

What are saturated fats?

They have the maximum number of


hydrogen atoms possible and no double


bonds


ie. butter

What are unsaturated fats?

They have one or more double bonds


i.e. safflower oil

what are triglycerides ?

an ester formed from glycerol and three fatty acid groups.


Triglycerides are the main constituents of natural fats and


oils, and high concentrations in the blood indicate an


elevated risk of stroke

what are isoprenes ?
is a common organic compound

Isoprenes are pure hydrocarbons


(C,H ONLY)



What are neutral fats ?

Neutral fats are neutral because they

are uncharged and do not contain acidic


or basic groups.


They are nonpolar and hydrophobic.

What is Cholesterol ?

a modified steroid that is synthesized by animal cells 
to become an essential  component of animal cell 
membranes
a lipid that is synthesized

by animal cells to become


an essential component of


animal cell membranes


it that helps membranes retain


fluidity

What are steroids ?

 steroids are also a lipid-base hormone which have a characteristicbulky four-ring structure and are VERY hydrophobic, i.e. Cholesterol 
(A component of animal cell plasma membranes
– also a starting point for synthesis of lipid hormones like...
steroids are also a lipid-base hormone which have a characteristic

bulky four-ring structure and are VERY hydrophobic, i.e. Cholesterol


(A component of animal cell plasma membranes– also a starting point for synthesis of lipid hormones like estrogen)

What is a lipid bilayer?

Phospholipids organized in two layers wherein

their hydrophobic tails are projecting inward while


their polar head groups are projecting outward

What is a detergent ?

amphipathic, surface active, molecules


with polar (water soluble) and


nonpolar hydrophobic) domains.


They bind stronglyto hydrophobic


molecules or molecular domains


to confer water solubility.

What is soap ?

A substance which dissolves in water,

thusforming a lather, and is used as a


cleansing agent

What is a saturated fatty acid ?

 A form of fatty acid that lacks unsaturated  linkages between 
carbon atoms.
  The name accounts for the inability of this fatty acid to absorb 
  any more hydrogen. Saturated fatty acids are commonly
  found in animal fats.
A form of fatty acid that lacks

unsaturated linkages between


carbon atoms.


The name accounts for the inability of this fatty acid to absorb any


more hydrogen. Saturated fatty acids are commonly found in


animal fats.

What is an unsaturated fatty acid ?

A form of fatty acid containing one or more double (or triple)

bonds and therefore can absorb additional hydrogen atoms.


Unsaturatted fatty acids may occur in cis or trans configuration.

What is a condensation reaction ?

A chemical reaction in which the joining of two organic

compounds results in the production and release of


water, ammonia, simple alcohol, or other molecules

What is a dehydration reaction ?

two molecules are covalently bonded to each other

through a loss of water molecule

What is a functional group ?

a group of atoms within a molecule that

interacts in predictable ways with


other molecules

What is Glycerol ?

Glycerol is a small molecule with three hydroxyl (-OH) groups

A colorless, odorless, viscous metabolic intermediate and


structural component of the major classes of biological


lipids, triglycerides and phosphatidyl phospholipids.

What is a hydrocarbon ?

A compound consisting solely of carbon

and hydrogen atoms.

What is hydrolysis ?

The process of splitting a compound into fragments with the

addition of water; a kind of reaction that is used


to break down polymers into simpler units, e.g.


starch into glucose


(use water to break the covalent bonds that held the


monomers together)

What is a lipid?

-Non-polar, contain C, H, O

-fats, cholesterol, phospholipids, steroids


-form cell membranes


-regulate growth and development


-long term energy storage


A fatty or waxy organic compound that is readily soluble


in nonpolar solvent (e.g. ether), but not in polar solvent


(e.g water)



What is a macromolecule ?

A large complex molecule, such as

nucleic acids, proteins, carbohydrates,


and lipids, with relatively large


molecular weight.

What is "nonpolar" ?

Pertaining to a compound that is nonionic

Examples of nonpolar compounds are fats and oil.


Many nonpolar compounds are hydrophobic. They do not


readily dissolve in water but they do in a nonpolar solvent.

What is oil ?

OIL : A triglyceride that is liquid at room

temperature.


Triglycerides that are solid at room temperature are known as FATS.

What are fats ?

Fats are composed of three fatty acids linked to glycerol.

–Also called triacylglycerols or triglycerides


A viscous liquid, or liquefiable substance not miscible with water.


A type of fat which is in a liquid form at normal room temperature.

Draw the relationship of water with triglycerides•Try it this way first:1.Draw three separate fatty acid chains surrounded by water molecules.2.Now draw the three FA chains together all surrounded by water


molecules.


Remember: Like dissolves like. Nonpolar triglycerides are NOT like polar water.

Explain phospholipid structure and shape ?

Phospholipids are the most 
abundant membrane lipids and are 
amphipathic, possessing both 
hydrophilic and
lipophilic  properties. They consist of a glycerol linked to a phosphate group (PO42–) and to either two chains of isoprene
or...

Phospholipids are the most


abundant membrane lipids and are


amphipathic, possessing both


hydrophilic and lipophilic properties.


Contain: glycerol, 2 fatty acid tails (hydrophobic), a PO4 group tails, they face each other making this semi-permable

Draw phospholipid chemical structure

•3C glycerol backbone 
•Two nonpolar, long-chain fatty acids attached to two of the Cs.
Can vary in length. 
•Phosphate attached to the other C
•Some polar head group attached to the phosphate. 

3C glycerol backbone


• Two nonpolar, long-chain fatty acids attached to two of the Cs.


Can vary in length.


• Phosphate attached to the other C


•Some polar head group attached to the phosphate.

what is diffusion ?

* movement of small solute with concentration gradient (high to low)


* Materials move down their concentration gradient through the


phospholipid bilayer


* it has to be a small body (O, or O2)


* happens randomly

What is facilitated diffusion ?



Molecules move across the plasma membrane with the help of a


carrier molecule. (High to low)


the passage of materials is aided both by a concentration gradient


and by a TRANSPORT PROTEIN


Example: glucose

What is endocytosis and exocytosis ?

endocytosis: Moving into cell (bacteria)


exocytosis: Move out of cell

What is denaturation ?

process modifying the molecular structure of a protein.


Denaturation involves the breaking of many of the weak linkages, or bonds (e.g., hydrogen bonds)


Denatured proteins have a looser, more random structure;


most are insoluble.


Denaturation can be brought about in various ways—e.g., by heating,


by treatment with alkali, acid, urea, or detergents, and by vigorous


shaking



What is a covalent bond ?

strongest type of bond


two atoms share a electron either equally


(non-polar) or unequally (polar)


NOT an attraction of opposite charges

The primary fuel for cellular respiration is glucose however, your diet is made up of other components such as _____________________ that can be used as cellular fuels.

lipids and proteins

Neurons (cells within the nervous system)


contain a high concentration of potassium ions. How could a neuron acquire even more


potassium?

active transport

What is the unique property of phospholipids that makes them well suited to forming the cell membrane (phospholipid bilayer)?

they contain polar and nonpolar regions

The difference between diffusion and osmosis


is that:

diffusion moves small substances from


high to low concentration while osmosis


moves water from high to low


concentrations

What are the characteristics of an


isotonic solution?

When the concentration of dissolved


substances in the solution is the same


as the concentration of dissolved


substances inside the cell.

The ____ portion of the cell membrane functions as a barrier while the ____ portion determines specific functions, including pumps, receptors, adhesion, etc.

lipid; protein

A sample of cells is placed in a salt solution.


The cells shrink and the membrane is distorted. Relative to the cell, the solution is probably:

hypertonic

Crossing a membrane by simple diffusion


can be distinguished from facilitated diffusion because:

Simple diffusion is not saturable;


facilitated diffusion rates are limited by the


number of functional membrane proteins


and can be saturated

What is in the cell membrane?

phospholipids, cholesterol, proteins,


glycoproteins and glycolipids

What is the purpose of phospholipids in the


cell membrane?

basic structure

What is the purpose of cholesterol in the cell membrane?

stabilization; fluidity

What is the purpose of proteins in the cell


membrane?

Receptor Proteins (bind to external chemicals in order to regulate


processes within the cell)


Recognition Proteins (provide a "fingerprint" for the cell , so it can be


recognized by other cells)


Transport Proteins (provide a passageway for molecules to travel


into and out of the cell)


Enzymatic Proteins (accelerate intracellular and extracellular reactions


on the plasma membrane)

The cell membrane is selectively permeable. What does this mean?

only certain things can cross, mainly 
depending on size (monomers and gases 
are considered small and polymers are 
considered large)

only certain things can cross, mainly


depending on size (monomers and gases


are considered small and polymers are


considered large)

What are some characteristics of passive


transport?

• Occurs spontaneously


• No energy required (high to low)


• Moving with the concentration gradient


• Slow


• Stops at equilibrium


• Examples: O2 CO2

A cell contains 5% glucose, 10% starch, and 5% protein. The solution outside the cell contains 10% glucose, 5% starch, and 20% protein. The only item that can move by diusion will be _____. Water will move _____ the cell due to the _______ solution surrounding the cell.

glucose; out of; hypertonic

What is an electrochemical gradient ?

The diffusion gradient of an ion, representing


a type of potential energy that accounts for


both the concentration difference of the ion across a membrane and its tendency to move relative to the membrane potential.

What are ion channels ?

Ions are charged particles such as Na + , H + , K + , Ca 2+ , and Cl - ions have great difficulty passing through the membrane by simple diffusion because cell membranes are composed of hydrophobic phospholipids that oppose the passage of hydrophilic ions. Therefore, an ion as small


as a hydrogen ion (H + ) requires a specific portal protein to facilitate its transport through the membrane.


Such a protein molecule is called an ion channel.

What is a fluid mosaic model ?


A membrane that is a fluid structure with a "mosaic" of proteins 
embedded into it.
the membrane as a mosaic of 
protein molecules drifting laterally 
in a fluid bilayer of phospholipids.



A membrane that is a fluid structure with a "mosaic" of proteins


embedded into it.


the membrane as a mosaic of


protein molecules drifting laterally


in a fluid bilayer of phospholipids.

What is a transport protein ?

a transmembrane protein that helps a certain substance, or class of closely related


substances, to cross the membrane

What is aquaporin ?

a channel protein in the plasma membrane


of a plant, animal or microorganism cell that specifically facilitates osmosis, the diffusion


of free water across the membrane, so the


water pores allow only water to pass


through

What is a sodium-potassium pump ?

a transport protein in the plasma membrane


of animal cells that actively transports sodium out of the cell an potassium into the cell

What is osmoregulation ?

regulation of solute concentrations and


water balance by a cell or organism

What are gated channels ?

a transmembrane protein channel that


opens or closes in response to a particular


stimulus

What is an integral protein ?

* Proteins that penetrate the hydrophobic core of the membrane;


they have amphipathic properties


* a transmembrane protein (integral proteins that span the membrane),


with hydrophobic regions that extend into the hydrophobic interior


of the membrane, and with hydrophilic regions in contact with the


aqueous solution on one, or both sides of the membrane (or lining


the channel in the case of a channel protein).

What is a peripheral protein ?



Proteins loosely bound to the surface of a


membrane and not embedded in the lipid


bilayer; hydrophilic properties allow interaction with membrane

What is a glycolipid ?

a lipid with one or more covalently


attached


carbohydrates

What is a glycoprotein ?

a protein with one or more covalently


attached carbohydrates

What are the 3 classes of transport proteins ?

1. Channel protein


2. Carrier/Transport protein


1. + 2. : PASSIVE transport


3. Pumps: ACTIVE transport.


ie. Sodium-potassium pump: uses ATP to facilitate transport


of Na + and K+ against their concentration gradients


(the chemical gradient would favour the flow of Na+ into


the cell and K+ out of the cell)

What are the 4 functions of the cell membrane?

1. enclose cells and defines boundaries to maintain structural and


functional integrity


2. maintain essential differences between compartments


3. act as a semi-permeable membrane between cytoplasm and external environment


4. biological membranes (plasma vs. organelle) vary in function, yet have same basic LIPID BILAYER structure

Cell membrane, in a nutshell!

1. barrier (separate/distinct)


2. transport (semi-permeability)

Plasma Membrane Structure:


What are the 3 lipid components of the


plasma cell membrane?

1. Phospholipid (most prevalent) - amphipathic


(both hydrophilic/hydrophobic),


with tails (C-H) in a line


2. Cholesterol


3. Glycolipids (minor component)

Plasma Membrane Structure:


What are the 2 types of membrane proteins?

1. Integral membrane proteins


2. Peripheral membrane proteins

Phospholipids:


Phospholipids are _________, meaning the contain BOTH hydrophilic and hydrophobic regions

amphipathic

Membrane Proteins:


What are the Various Functions of Membrane proteins?

1. Transport of ions and polar molecules


2. Binding of hormones (receptors)


3. Signal transduction across membrane


4. structural stability of bilayer


5. give each cell its functional properties

Membrane Fluidity (Fluid Mosaic Model):


Fluidity is moderated by the membrane's...

cholesterol content: The cholesterol moderates fluidity


- cholesterol INCREASES fluidity of membranes with


high saturated fatty acid content


- DECREASES fluidity of membranes high in unsaturated fatty acids

Protein channels and carrier protein

Transport protein: a transmembrane protein that helps a certain substance or class of closely related substances to cross the membrane


Carrier Protein:

What are the 3 major classes of


macromolecules in biology?

1. The Proteins (Peptides or Polypeptides)


2. The Carbohydrates (= the saccharides;


macromolecules are specifically the


polysaccharides)


3. The Nucleic acids (nucleotides)

Upon contact with water phospholipids


form either:

1. Micelles




2. Phospholipid bilayers (lipid bilayers)


- heads face the water and tails face


each other

Why do single tailed phospholipids form


micelles?

*essentially they try to   
  bury their tails.
*Polar water molecules 
  cannot form hydrogen 
  bonds with 
  hydrocarbon tails

*essentially they try to


bury their tails.


*Polar water molecules


cannot form hydrogen


bonds with


hydrocarbon tails

What happens when lipid bilayers in water


are agitated by shaking ?

The layers break and 
re-form as small, 
spherical structures called liposomes.

The layers break and


re-form as small,


spherical structures called liposomes.

Why do double bonds between carbons 
in a  carbon chain 
reduce the hydrophobic 
interaction?

Why do double bonds between carbons


in a carbon chain


reduce the hydrophobic


interaction?

The double bonds in unsaturated fats cause kinks in the phospholipid tails so that the 
hydrophobic tails can't interact as strongly, hereby increasing the 
permeability
The double bonds in

unsaturated fats cause kinks


in the phospholipid tails so that


the hydrophobic tails can't


interact as strongly, hereby


increasing the permeability

What is a concentration gradient ?

A difference in solute concentration creates


a concentration gradient.


Molecules and ions move randomly when a


concentration gradient exists, but there is a


NET MOVEMENT from high to low


concentration regions.


Diffusion is spontaneous.

What is osmosis ?

Water moves quickly across lipid bilayers from regions of high to low water concentration via osmosis, a special case of diffusion.
Osmosis can only occur across a 
selectively permeable membrane.

Water moves quickly across lipid


bilayers from regions of high to


low water concentration via


osmosis, a special case of diffusion.


Osmosis can only occur across a


selectively permeable


membrane.

What is "FRAP" ?

Fluorescence recovery after photobleaching



Explain: Passive/ Facilitated/ Active transport ?

1. Passive: only concentration gradient drives diffusion process -


down gradient only, i.e. osmosis


2. Facilitated: passive transport mediated by a membrane protein


3. Active: energy input allows transport proteins to move


counter-gradient