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67 Cards in this Set

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Pyschrophile:




Temp Range?




Where are they found?

-5 to 15 d. C




Arctic & Antarctic regions

Psychrotroph:




Temp Range?




What do they effect / Why are they important?

20 - 30 d. C (fridge temp)




Food spoilage

Mesophile:




Temp range?




Why are they significant?

25 - 45 d. C (our body temp)




pathogens!

Thermophile:




Temp Range?




Where are they found?

45 - 70 d. C




hot springs

Hyperthermophile:




Temp range?




Where are they found?

70 - 110 d. C




hydrothermal vents

Basic way to convert degrees F to C?

double C and add 30 to get approximate F

Which two of the temperature-specific prokaryotes are the most common / most significant to us?

1. Psychrotrophs (food spoilage)




2. Mesophiles (pathogens)

How does temperature affect prokaryotes?

Each species has a well-defined temp range.





How does temperature affect prokaryotes:




Thermophiles - how can they survive hot temps?





Their proteins resist denaturing




(thermostabiity comes from amino acid sequence)

How does refrigeration preserve food?

Slows down spoilage by limiting growth of otherwise fast-growing mesophiles




(Psychrophiles & Psychrotrophs can still grow, but slowly.)

How does temperature affect disease in our bodies?




Give one disease example.

Some microbes cause disease in certain parts with certain temps...




Ex. Hansen's disease (leprosy) attacks the coolest regions (extremities)




Ex. - Syphilis used to be treated by injection Plasmodium to cause high fevers of malaria, which could be treated with quinine

Oxygen requirements:




What is an obligate aerobe?





*Only grows when O2 is available

What is an obligate anaerobe?





* Cannot grow when O2 is present




(Does not use O2)

What is a Facultative anaerobe?





*Grows best the O2 is available, but also grows without it.

What is a Microaerophile?

Grows only if small amounts of O2 are available




(just below surface in test tube photo)

What is an Aerotolerant anaerobe?

Grows equally well with or without O2

ROS reactive oxygen species:




What are they and what do they do?

When using oxygen in respiration these organisms will produce superoxide dismutase and/or catalase to protect cell.

Catalase test results will be either:

Catalase Positive




or




Catalase Negative

What is the catalase test?

The presence of catalase enzyme in the test isolate is detected using hydrogen peroxide.




If the bacteria possess catalase (i.e., are catalase-positive), when a small amount of bacterial isolate is added to hydrogen peroxide, bubbles of oxygen are observed.

What does the catalase test tell us?

catalase is an enzyme that cells use to break down toxic end products of oxygen use in metabolism.




The presence of the enzyme means that the organism should be able to tolerate oxygen.

What is the catalase test most commonly used for?

To differentiate members of the catalase-positive Micrococcaceae from the catalase-negative Streptococcaceae.

What bacterias might we use in lab for catalase test?

- Staphylococcus aureus = positive




- Enterococcus (Streptococcus) = negative

In which pH would you find an acidophile?

below 5.5

In which pH would you find an alkaliphile?

above 8.5 (oceans)

In which pH would you find a neutrophile?

6.5 - 7.5

What pH are most bacteria?

Most maintain constant internal pH around neutral




(they will pump out protons if in an acidic environment and will bring in protons if in an alkaline environment)

Food can be preserved by increasing _________.

acidity

______________ grows in stomach, produces urease to split urea into COs and ammonia to decrease acidity of surroundings

H. pylori

What does halo-tolerant mean?

able to withstand up to 10% salt in their environment

What does halophile mean?




What are some examples?

REQUIRE high salt concentrations




-marine bacteria


-Dead Sea, Utah salt flats

What type of bacteria live in the ocean?

alkaliphiles (over 8.5 pH)




?? Halo-tolerant / Halo philes?

What are the major elements necessary for prokaryotic growth?

-Carbon


-Hydrogen


-Oxygen


-Nitrogen


-Sulfur


-Phosphorus


-Potassium


-Magnesium


-Calcium


-Iron




(CHON+ SPPMCI)





What elemental source distinguishes different groups?

Carbon source

Autotrophs (make their own food) use ___________ carbon as CO2 (carbon fixation)




(organic or inorganic)

INORGANIC





*important in the carbon cycle




* without them we would run out of organic carbon

Heterotrophs (do not make their own food) use ______________ carbon

ORGANIC

Nitrogen is required for what 3 things?

1. amino acids




2. nucleic acids




3. proteins

Nitrogen fixation:




Many use _____________ some convert it from nitrate)

ammonia

Which element(s) are often the limiting factor?

Iron, Phosphorus




(microbes can bind up iron if they want to keep particular organisms away)

Chemical / Function




1. Carbon, Oxygen, & Hydrogen:

Component of:




amino acids


lipids


nucleic acids


sugars

Chemical / Function




Nitrogen:

component of:




amino acids


nucleic acids

Chemical / Function




Sulfur:

Component of some amino acids

Chemical / Function




Phosphorus:

Component of:




-nucleic acids


-membrane lipids


ATP

Chemical / Function




Potassium, Magnesium, Calcium

Required for the functioning of certain ENZYMES

Chemical / Function




Iron

part of certain enzymes

Nutritional Types:




List Energy Source, Carbon Source, & Give Examples




Photoautotroph

Energy source = light


Carbon Source = CO2




Examples:




-Oxygenic: plants, cyanobacteria


-Anoxygenic: green & purple bacteria

Nutritional Types:




List Energy Source, Carbon Source, & Give Examples




Photoheterotroph:

Energy Source = light


Carbon Source - Organic compounds




Examples = green bacteria, purple non sulfur bacteria

Nutritional Types:




List Energy Source, Carbon Source, & Give Examples




ChemoAUTOtroph

Energy Source: chemical


Carbon Source: CO2




Example: iron-oxidizing bacteria

Nutritional Types:




List Energy Source, Carbon Source, & Give Examples




ChemoHETEROtroph

Energy Source: chemical


Carbon Source: organic compound (think US)




Example:




-Fermentative bacteria


-us, animals, protozoa, fungi, bacteria

What is chemically defined media?

Media that are composed of exact amounts of pure chemicals

What are chemically defined media used for?

Specific research experiments:




1. growth of chemoautotrophs, photoautotrophs, microbiological assays




*each batch is chemically identical


*no new variable is introduced




*usually buffered

What is selective media?

Inhibits growth of certain species




*Suprression of unwanted microbes; encouraging desired microbes

What is differential media?

Contains specific substance that microbes change in an identifiable way




*Differentiation of colonies of desired microbes from others




ex. color change - pH indicator

List two media that are both selective and differential:

1. MacConkey's Agar




2. Mannitol Salt

List one medium that is ONLY differential (and not selective)

Blood Agar

In terms of being selective, MacConkey's grows ONLY Gram __________ bacteria.

NEGATIVE




Inhibits G+

In terms of being differential, MacConkey's contains _______________ fermenters that cause color change in colonies.

Lactose




Lactose fermenters turn PINK




Non-lactose fermenters are colorless

Name 3 bacteria that a MacConkey's test could help to identify:

1. E. coli




2. Salmonella




3. Shigella

In terms of being selective, Mannitol Salt grows:

halophiles

In terms of being differential, Mannitol Salt contains _____ _________ for mannitol fermentation

pH dye




-Mannitol + = red changes to YELLOW


-Mannitol - = stays red

Name 3 bacteria that you could use the Mannitol Salt test for:

1. Staphylococcus (Gram +)




2. Staph aureus (Mannitol +)




3. Staph epidermis (Mannitol -)

In terms of being differential, Blood Agar:

certain bacteria contain enzymes that hemoyse RBCs

The 3 types of RBC hemolysis in Blood Agar are:

1. Alpha hemolysis - greenish, bruised discoloration




2. Beta hemolysis - Complete hemolysis - clear zone around colony




3. Gamma hemolysis - NO hemolysis...no color change around colony

What bacteria could you use the Blood Agar medium for?

Streptococcus

Culture Media Review




Chemically Defined Media is used for:

Growth of chemoautotrophs and photoautotrophs; microbial assays

Culture Media Review




Selective Media is used for:

Suppression of unwanted microbes;




Encouraging desired microbes

Culture Media Review




Differential Media is used for:

Differentiation of colonies of desired microbes from others

Reducing Media:

used in science labs;




growth of obligate anaerobes;




requires special equipment