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767 Cards in this Set

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What are the X and Y intercepts of Henderson-Hasselbach graphs?

How is Km related to affinity?

What is the affect of competitive and non-competitve inhibition on Km and Vmax?
1/vmax is plotted on the Y axis, 1/-Km is on the X axis

low Km corresponds to high affinity

competitive inhibition increases Km, non-competitive decreases Vmax
How is the volume of distribution calculated given the amount of drug (100mg)administered and plasma levels (5ug/mL)?

What if the half-life (10h) and clearance (4L/h) of a drug are given?

How is clearance calculated given rate of elimination and plasma drug concentration?
Vd=drug given/plasma levels ANS: 20L

t1/2=(0.7*Vd)/Cl ANS: 57L

CL=U*V/P
How is the loading dose calculated? (Css=1mg/L, F=.5 Vd=40L)

How is the maintenence dose calculated? (Css=1mg/L, F=1, Cl=1mL/min)

What is the F when given IV? How is the loading dose affected by hepatic/renal dysfunction?
Loading dose=Css*Vd/F (80mg)

Maintenance dose=Css*Cl/F (0.001mg/min)

F=1 with IV, loading dose is not affected
What three drugs are cleared by zero order elimination?

A patient overdosed on a weak acid, what should be given? What should be done about a weak base overdose?

What phase of metabolism to geriatric patients lose first?
high dose aspirin, ethanol, phenytoin

weak acid: bicarb, weak base: ammonium chloride to trap in urine

phase 1
How is the therapeutic index calculated?
LD/ED
What type of channels are nicotininc receptors? Muscarinic?

Where is the primary location of muscarinic receptors?Where are nicotinic receptors located?

What receptors are found on renal vascular sm ms?
nicotinic are ligand gated Na/K channels, muscarininc are G-protein coupled

MUSCARINIC: parasympathetic to cardiac, sm ms, glands, nerve terminals sympathetic to nerve terminals NICOTINIC: sypathetic to ganglion, adrenal medulla, skel ms

dopaminergic (D1) receptors are found in renal vascular sm ms --acts to relax
What type of G protein mediates alpha-2 receptors?
H1? V2?
q, q, s

qiss and qiq 'til your siq of sqs
a1a2b1b2 and M1M2M3 'til your D1D2H1 of H2V1V2
Which g-protein class involves increasing the [Ca] concentration inside the cell via phospholipase C, PIP and IP3?

Which inhibits adenylate cyclase to decrease protein kinase A?

Which forms DAG that leads to the formation of protein kinase C?
Gq

Gi

Gq
What drugs inhibits NE reuptake?

What drug inhibits the fusion of the NE transporter with the nerve terminal?

What drug inhibits the uptake of NE into the NE transporter?

What drug inhibits the conversion of tyrosine to DOPA?
cocaine, TCAs

guanethidine

reserpine

metyrosine
What drug inhibits choline uptake into the presynaptic nerve?

What drug inhibits ACh uptake into the transporter in the presynaptic nerve terminal?
hemicholinium

vesamichol
In the presynaptic NE terminal, what three receptors modulate NE release and in what way?
M2: negatively

Angiotensin 2 receptor: positively

alpha 2: NE in the cleft causes negative feedback inhibition
What is the primary use of bethanechol?

What drug is used to test for muscarinic sm ms contraction in asthmatics?

What drug does not penetrate the CNS and acts to reverse NM junction blockade, urinary retention, and neurogenic ileus?
cholinergic agonist which activates Bowell and Bladder smooth muscle (resistant to AChE)

methacholine (acetylcholine agonist)

neostigmine
What is the treatment for cholinesterase inhibitor poisoning?

What is the antidote for atropine overdose?

What 4 acetylcholine-related drugs are used for glaucoma?
atropine with pralidoxime

physostigmine

physostigmine, echothiophate, carbachol, PILOCARPINE in emergencies
Where are M1, M2, and M3 located?

What M1 antagonist is used for Parkinsons?

What is the effect of atropine on the eye?
M1-CNS, enteric nervous system, M2- decrease heart rate and contractility, M3-gut peristalsis, exocrine gland secretion, bladder contraction, miosis of eye

benztropine

myadriasis and cycloplegia
What muscarinic antagonist is used in COPD and asthma?

What are the uses for methscopolamine, oxybutinin and glycopyrrolate?

What two muscarinic antagonists are used in peptic ulcer treatment?
ipratropium

reduce urgency in mild cystitis and reduce bladder spasms (competitive M1,M2,M3 antagonist)

pirenzepine and propantheline
What two alpha agonists are used in the treatment of glaucoma by vasocontriction?

What three beta-blockers are used by decreasing aqueous humor secretion?

Which glaucoma agent should not be used in closed angle glaucoma?

Which agent causes browning of the iris?
epinephrine and brimonidine

timolol, betaxolol, carteolol

epinephrine

latanoprost (a PGF 2alpha drug which increases aqueous outflow)
What are the five main symptoms of atropine overdose?
red as a beet, hot as a hare, mad as a hatter, dry as a bone, blind as a bat (cycloplegia)

MAY ALSO CAUSE ACUTE ANGLE CLOSURE IN ELDERLY AND URINARY RETENTION IN BPH
What nicotinic antagonist is used to prevent vagal responses to drop in blood pressure (prevent reflex bradycardia from NE)

What are the four main SE?
hexamethonium

severe orthostatic HTN, blurred vision, constipation, sexual dysfxn
What two beta-2 agonists are used to reduce premature uterine contractions?

What is the selectivity of phenylephrine and what is its uses?

What drug is used to increase renal perfusion in shock, what is its selectivity?
terbutaline and ritodrine (terbutaline adds small beta-1 activity)

phenylphrine is selective for alpha-1 more than alpha-2 and is used for nasal decongestion, vasoconstriction, pupillary dilation

dopamine D1,D2>beta>alpha (inotopic and chronotropic for heart failure too)
What drug is only inotropic for heart failure, and is also used in cardiac stress testing? What is its selectivity?

What is the selectivity of low dose epi? high dose epi? NE?
dobutamine, beta-1>beta-2

low dose=beta-1
high dose=no selectivity
NE: alpha-1, alpha-2 > beta-1
What indirect sympatheticomimentic is used for urinary incontinence, hypotension and nasal decongestion?

What are two centrally acting alpha-2 agonists and what are they primarily used for?
ephedrine (release stored catecholamines like amphetamine)

clonidine and alpha-methyldopa are used in HTN, especially with renal disease
A patient with renal disease has HTN, what are two drugs that would not decrease renal blood flow?
clonidine or alpha-methyldopa
What are the four selective beta-2 agonists?
Metaproterenol
Albuterol
Salmeterol
Terbutaline
A patient has a pheochromocytoma, what two drugs would be used before surgery and what receptor do they act on?
phenoxybenzamine irreversibly inhibits the alpha- receptors NONSELECTIVE, phentolamine acts reversibly
What are the two uses of prazosin/terazosin/doxazosin?

What receptor do they act on?

What alpha-2 blocker is used in the treatment of depression?
urinary retention in BPH and HTN

alpha one antagonists

mirtazapine
What is two drugs (illegal and legal) may cause coronary vasospasm?

What drugs may cause cutaneous flushing?

What drugs are associated with torsades?
cocaine and sumitriptan

VANC-vanco, adenosine, niacin, ca channel blockers

sotalol, quinidine (and their classmates), cisapride
What drugs are possible causative agents for agranulocytosis?

Aplastic anemia?

Direct Coombs positive hemolytic anemia?
CCCPM-clozapine, carbamazepine, colchicine, propylthiouracil, methimazole

NSAIDs, benzene, chloramphenicol, propylthiouracil, methimazole

methyldopa
Hemolysis in G-6-PD deficient pts?

Patients should be monitored for pulmonary fibrosis in what three agents?

What drug class has been shown to cause acute cholestatic hepatitis?
hemolysis IS PAIN (isoniazid, sulfas, primaquine, aspirin, ibuprofen, nitrofurantoin)

bleomycin, busulfan, amiodarone

macrolides
A patient has TB and begins treatment only to see his LFTs go up dramatically, why?

A man comes in with gynecomastia, he is on a laundry list of drugs, what may be causing his condition?

A patient has drug induced massive hepatic necrosis, what is the likely cause? Bacterial?
INH induced hepatitis

Spironolactone, digitalis, cimetidine, alcohol, ketoconazole

halothane, valproic acid, acetaminophen. Amanita phalloides (i HAVA massive necrosis)
A patient is on glucocorticoids for 5 years and abruptly stops, what is likely to be seen?

What drug is known to cause gingival hyperplasia?

What drugs may precipitate gout?
adrenocortical insufficiency

phenytoin

furorsemide, thiazides, niacin
What are two drugs that may cause osteoporosis?

What are three drugs that cause photosensitivity

A kid ruptures a tendon and has multiple sites of cartilage damage, what class of drugs is likely at fault?
corticosteroids, heparin

i SAT for a photo-sulfonamides, amiodarone, tetracycline

floroquinolones
A patient has SLE-like symptoms but all Ab titers are negative, what is the possible cause?
drug induced--hydralazine, INH, procainamide, phenytoin (it's not HIPP to have lupus)
What causes Fanconi's syndrome (proximal tubular dysfunction)?

What two drugs may cause interstitial nephritis?

Hemorrhagic cystitis?
expired tetracycline, lead, tenofovir, congenital

NSAIDS, methicillin

cyclophosphamide, ifosphamide
What may cause cinchronism?

Diabetes insipidus?

Aside from buproprion, what drug carries a high risk of seizures?
quinine, quinidine

litium, demeclocycline

imipenem/cilastatin
What drugs cause a disulfiram-like reaction?

What drug may cause a mixed nephrotoxicity/neurotoxicity?

Mixed nephrotoxicity/ototoxicity?
metronidazole, cephs, procarbazine, 1st gen sulfonylureas

polymyxins

AMGs, loop diuretics, cisplatin
Queen Barb takes Phen-phen and Refuses Greasy Carb Shakes and Alcohol, refers to what?

What are the CYP 450 inhibitors?
CYP450 inducers (Quinidine, Barbituates, Phenytoin, Rifampin Griseofulvin, Carbamazepime, Alcohol, St. John's Wart)

INH, sulfonamides, cimetidine, ketoconazole, erythromycin, grapefruit juice

I C KEGS going down
What 3 drugs should not be given to patients with sulfa allergies (only include those without 'sulf' in them)?
thiazides, celecoxib, furosemide
A woman is told to visualize a procedure before undergoing it in order to relax, what is this called?
systematic desensitization
A group of individuals who smoke are followed for 12 years, those who develop heart disease and those who don't are categorized. What kind of study is this?
prospective cohort
What stage of sleep involves variable blood pressure and penile tumescence?
REM
What is a Phase 1 trial?
small number of healthy volunteers are used to assess safety, toxicity and pharmakokinetics of a drug
What is a Phase 2 trial?
small group of diseased pts, assess treatment efficacy, optimal dosing, adverse effects
What is a phase 3 trial?
large group of patients, randomized--compares new treatment to current standard of care
What is the denominator in both incidence and prevalence?
total population at risk (during a given time period if discussing incidence)
In a population of 10,000 males and 10,000 females, 1 man develops prostate cancer every year. What is the incidence in the 10th year if no one is cured?
1 in 9,990 (remove those no longer 'at risk')
Positive predictive value depends heavily on what?
the prevalence of the disease in the population (high prevalence correlates with high PPV)
How is relative risk calculated?
percent with disease in the exposed group divided by the percent with the disease in the unexposed group
How is attributable risk calculated?
differences in the prevalence of exposed vs the prevalence in the unexposed (e.g. prev exposed - prev unexposed)
The precision of a test is concerned with what?

Accuracy?
how reliable, consistent and reproducible the test is

validity or trueness of test measurements
How does random error effect a test?

How does a systemic error effect a test?
reduces precision

reduced accuracy
What characterizes a crossover study?
each participant acts as his own control
Information regarding the results of a study is gathered at an innappropriate time, what is this called?
late-look bias
A study contains 90% Asian Americans, what kind of bias would this be?
sampling bias
A patient knows that Parkinson's disease is associated with a pill-rolling tremor, and so he responds in the affirmative when asked if he has a tremor, even though he doesn't. What is this called?
recall bias
What characterizes a positively skewed result?
the mean is greater than the median which is greater than the mode
What is a type 1 error?
stating there is a difference when none exists
In statistics, what is beta?

How is power calculated?
beta is the probability of making a type 2 error

1-beta
How is the standard error of the mean calculated?
standard deviation divided by the square root of the sample size
How much of the sample fits within 1 standard deviation, 2, 3?
68%, 95%, 99.7%
What are two ways that the null hypothesis will not be rejected pertaining to confidence intervals?
if the CI crosses zero for a mean between 2 variables or if it crosses 1 for odds ratio or relative risk
What is the confidence interval if the mean is 4.0 the SEM is .5?
3.0 to 5.0 (mean +/- 1.96*SEM)

[SEM=SD/sqroot(N)]
What test is used to check the difference between two means?
t-test
What checks the difference between three or more means?
ANOVA
What test is used to check data from two different proportions or percentages?
Xsquared
What are the three tiers of limiting disease on a international scale?
prevent
detect
reduce disability
When studying two variables statistical analysis gives an R value of .999 what does this mean?

What would be the coefficient of determination?
very strong evidence, R values near 1 or -1 have the highest correlation

.999 * .999
What bacterial infections are reportable (4)?
shigella, salmonella, gonorrhea, syphilis
What are the top three causes of death in the elderly?

15-24?

25-64?
heart disease, cancer, stroke

injuries, homicide, suicide

cancer, heart disease, injuries
What is does Medicare Part A relate to?

Part B?
hospitals

doctors
A doctor withholds information that may make a patient suicidal, what is this called?
therapeutic priviledge (exeption to informed consent)
What is the burden of proof in malpractice?

What constitutes malpractice?
more likely than not

physician had a duty to the patient, physician breached that duty, patient was harmed, this was due to the breach of duty
What if a child wants to know more about his illness?
say nothing, the parents get to decide what information to disseminate
What is part of the APGAR score and what differntiates 1 vs 2 points for each?
Appearance (all pink vs. trunk pink)
Pulse (less or greater than 100)
Grimace (grim vs. grim+cough)
Activity (some vs active)
Respiration (reg vs irreg)
What age group has the highest suicide rate?
65-75yr old males
A patient is riding a tricycle and was just potty trained, how old is she?
3 (pee at 3, 3 wheels at 3)
When does the Moro reflex disapear?

When does the Babinski reflex dissapear?

When does stranger anxiety appear?
3 months

12-14months

7-9months
At what age range does a child understand death and identify with same-sex parent?

When do children develop abstract reasoning?

When do children start walking?
6-11y

11 in girls 13 in boys

15 months
What are the Kubler-Ross stages of grief?
denial, anger, bargaining, grieving, acceptance (not always in this order and may have more than 1)
Describe the Tanner stages of development.
1 Childhood
2 pubic hair, bigger testes, breast tissue elevation
3 curly pubic hair, increased penis length
4 increased penis width, raised areola, dark scrotal skin
5 adult with no raised areola
What characterizes awake individuals with eyes open on EEG?
beta waves
What stage of consciousness has alpha waves?
awake with eyes closed

at night BATS Drink Blood
What characterizes light sleep?
theta waves

at night BATS Drink Blook
During what stages do people sleep walk?

What is seen the most often on EEGs?
3-4 (deepest NREM)

sleep spindles and K complexes characteristic of Stage 2 sleep (45% of sleep)

at night BATS Drink Blood
What causes extraocular eye movements during REM sleep?
paramedian pontine reticular formation/conjugate gaze center
What drugs shorten stage 4 sleep and why is this important?
benzos shorten stage 4 sleep which limit night terrors and sleep walking
What is the use of imipramine in sleep?
shortens stage 4 to treat enuresis
What monoamine initiates REM sleep?

What shortens it?

What is the principle neurotransmitter involved in REM sleep?
5-HT in the raphe nucleus

NE

AcH
A patients sleep episode begins with REM, what does this point to?
narcolepsy
How does brain O2 usage change during REM?
increased
Deficiency of what vitamin would cause Beri-Beri?

What is dry and wer Beri-Beri?
deficiency of thiamin (B1)

dry: polyneuritis, symetrical ms wasting

wet: high output cardiac failure (dilated), edema
A patient has cheilosis and corneal vascularization with angular stomatitis?
riboflavin (B2)

FAD, vitamin B2, 2 ATP
What are two key ingredients in brewing up some niacin (B3)?
tryptophan and B6

NAD, vitamin B3, 3 ATP
What vitamin is a constituent in CoA and fatty acid synthesis?
B5 (pantothenic acid)
A patient presents with convulsions and hyperirritibility with peripheral neuropathy, what vitamin is deficient? What two drugs may induce this deficiency?
B6

INH and oral contraceptives
Abnormal myelin is seen in what vitamin deficiency?
vitamin B12, due to decreased methionine or increased methylmalonic acid
What vitamin is vital for the synthesis of nitrogenous bases in DNA and RNA?
folate
Antibiotics or injestion of raw eggs may cause what deficiency?
avidIN binds biotIN
What three reactions is biotin a cofactor in?
pyruvate-->oxaloacetate
acetyl-CoA-->malonyl-CoA
proprionyl-CoA-->methylmalonyl-CoA
The conversion of dopamine to NE requires what vitamin cofactor?

What enzyme?
vitamin C

dopamine-beta-hydroxylase
What disease causes vitamin D excess most commonly?
sarcoidosis
A patient presents with increased RBC fragility and neurological dysfunction, what is the likely vitamin deficiency?
vitamin E
This vitamin catalyzes gamma carboxylation of glutamic acid residues?

Where is it synthesizes?

What would be the clotting times in a newborn?
vitamin K

intestinal flora

increased PT, aPTT, normal bleeding time
What deficiency presents as decreased adult hair, hypogonadism and delayed wound healing?
Zinc deficiency
What is the limiting reagent in alcohol metabolism?
NAD (2 are required)
What causes the fatty change in alcoholic livers?
high NADH/NAD ratio shunts pyruvate to lactate and OAA to malate, gluconeogenesis is inhibited (hypoglycemia) and fatty acid synthesis is emphasized
What causes Kwashikor?
a protein deficient MEAL

Malnutrition
Edema
Anemia
Liver (fatty)
Which nucleic acid is formed by cysteine deamination?
uracil
What are the five ingredients for purine synthesis?
mix CO2, aspartate, N10 formyl-THF, glutamine, glycine,
What are the two ingredients for pyrimidine synthesis?
aspartate, carbamoyl phosphate
What is the direct precursor of pyrimidines and purines?
purines: IMP
pyrimidines: orotate + PRPP
What occurs with a nonsense mutations?
change resulting in early stop codon
What is the difference between transition and transversion?
Transition=purine for purine, pyrimidine for pyrimidine.

Transversion=conversion
What molecule prevents DNA from reannealing?
Single Strand Binding proteins
What type of RNA is the most abundant?
rRNA
What DNA repair process is mutated in XP?
nucleotide excision repair
What direction is protein synthesized?
N to C
What is the start codon?

What are the stop codons?
AUG--codes for Met

UGA, UAA, UAG
To what regulator of gene expression do transcription factors bind?
enhancer, and promotor at TATA/CAAT box
A person arrives in the emergency room after eating death cap mushrooms, what biochemical process is affected?
RNA polymerase 2
What do the three types of RNA polymerase do?
RNA poly 1: rRNA
RNA poly 2: mRNA
RNA poly 3: tRNA

(the order that they are used in protein synthesis)
If the capped and tailed DNA transcript is mRNA, what is it called before capping and tailing?
hnRNA (only processed RNA is transported out of the nucleus)
Where does the amino acid bind to tRNA?
at the 3' end CCA sequence
What enzyme checks to make sure that the tRNA is bound to the right amino acid?
aminoacyl-tRNA synthetase
What is the energy cost per amino acid added to an illongating protein chain?
ATP-->AMP for tRNA aminoacylation

GTP-GDP-->loading tRNA onto ribosome

GTP-GDP-->translocation
What are the three sites of the ribosome?
A=where incoming Aminoacyl rRNA Arrives
P=accomodates growing Peptide
E= holds Empty tRNA as it Exits
What is the removal of N or C-terminal propeptides from zymogens to generate mature proteins called?
trimming
Where does Rb and p53 act in the cell cycle?
between G1 and S
Which cells are always in G0, which cells are never in G0?
permanent cells are always in G0, labile cells are never in G0
Where is the site of N-linked oligosaccaride addition to proteins?
rER
What does COP1 and COP2 signal?
COP1: retrograde (golgi to ER)
COP2: anterograde (ER to golgi)
What five drugs act on microtubules?
mebendazole, paclitaxel, griseofulvin, vincristine/vinblastin, colchicine
What is an ATPase that links peripheral doublets and causes bending of cilium by differential binding of doublets?

In what condition is this mutated?
dynein

Kartagener's syndrome
What is a major component of RBC membranes, myelin, bile, and surfactant and is used in cholesterol esterification?
phosphatidyl choline
A tissue stains strongly for vimentin, what type of tissue is this?
connective tissue
What is the biochemical function on Ouabain?
inhibits binding to the K+ site
Where is the site of types 1-4 collagen?
1= bONE, skin, tendons, dentin, fascia, cornea, wound repair
2=carTWOlege, vitreous body, nucleus pulposis
3=reticulin in skin, blood vessels, uterus, fetal tissue, granulation tissue
4=under the floor (basement membranes and basal lamina)
What causes the blue sclera in osteogenesis imperfecta?
translucency of the connective tissue over the choroid
What is the biochemical basis for alpha-1-antitrypsin induced emphysema?
alpha-1-antitrypsin inhibits elastase
What three processes occur both inside and outside the mitochondria?
heme synthesis, urea cycle, gluconeogenesis
What is rate limiting in heme synthesis?

Urea cycle?

Ketogenesis?

Fatty acid oxidation?
ALA synthetase

Carbamoyl phosphate synthetase 1

HMG-CoA synthetase

carnitene acyl transferase 1
What is the rate limiting step in Fatty acid synthesis?

HMP shunt?

Glycogenolysis?

Glycogen synthesis?
acetyl-coA carboxylase

glucose-6-P-deH

glycogen phosphorylase

glycogen synthase
What is the rate limiting step in the TCA cylce?

Gluconeogenesis?

Glycolysis?

De novo pyramidine synthesis? Purine?
isocitrate dehydrogenase

fructose-1,6-bisphosphatase

PFK-1

aspartate transcarbamylase, glutamine-PRPP amidotransferase
What is the main product of the pentose phosphate shunt and what is it used for?
NADPH is used for anabolic processes, respiratory bursts and the p-450 system
What does a deficiency in NADPH oxidase cause?
chronic granulomatous disease
What is the difference between hexokinase and glucokinase?
hexokinase is found everywhere, has a high affinity and low capacity for glucose and is feedback inhibiteed by glucose-6-P

glucokinase is found only in the liver and pancreatic beta cells, has a low affinity and high capacity for glucose and is not feedback inhibited
What does a glycolytic enzyme deficiency demonstrate as?
hemolytic anemia (usually a malfunctioning pyruvate kinase)
What stage of glycolysis does citrate inhibit?

Alanine?

Acetyl-CoA and NADH?
PFK-1

Pyruvate kinase (Phosphoenol pyruvate to pyruvate)

Pyruvate dehydrogenase (pyruvate to acetyl-CoA
What is the biochemical mechanism of arsenics pathology?
inhibits lipoic acid (a required cofactor for pyruvate dehydrogenase)
What activates pyruvate dehydrogenase?

What are the 5 required cofactors?

What is the reaction?
EXERCISE (high NAD/NADH ratio, high ADP, high Ca)

B1 (Thiamine pyrophosphate), B2, B3, B5 (CoA), lipoic acid

NAD+CoA+pyruvate-->NADH+CO2+acetyl CoA
Why would you want to convert pyruvate to alanine?

To Oxaloacetate?
carry amino acids from liver to ms

replenish TCA cycle or gluconeogenesis
What is the function of the Cori cycle?
cycle lactate from the muscles/RBCs to the liver to undergo gluconeogenesis at a cost of 4ATP
What 5 cofactors does alpha-ketoglutarate dehydrogenase require?
B1,B2,B3,B5,lipoic acid
What is an ATPase inhibitor in the electron transport chain?

What are some uncoupling agents?

How does CN and CO inhibit ETC?
oligomycin

2,4 DNP, aspirin, and thermogenin in brown fat all cause increased permeability=H+ leak= increased O2 consumption

inhibit electron transport=decreased gradient
What type of fatty acids cannot participate in gluconeogenesis?
even chain fatty acids yield only acetyl-CoA equivalents

odd chains yield proprionyl-CoA which can enter gluconeogenesis
What gluconeogenic enzyme requires biotin and ATP?

What enzyme requires GTP?
pyruvate carboxylase

PEP carboxykinase
By what mechanism does and Aldolase B deficiency affect a cell?
Fructose-1-P builds up, limiting the amount of phosphate that can be used for glycogenolysis and gluconeogenesis
What comprises sucrose?

What comprises lactose?
glucose+fructose (don't use sucrose in aldolase B def)

glucose+galactose (don't give in galactose-1-P-uridyltransferase deficiency)
What amino acids are glucogenic?
His Met Arg Val (His M AR VAL ous glucose)
What are the acidic amino acids?

What are the basic amino acids?
Asp, Glu

Arg, Lys (Arg, Lys are increased in histones to bind to negative DNA)
How is ammonia cycled from muscle to the liver?
via alanine, which is formed when glutamate is transformed to alpha-ketoglutarate and pyruvate forms alanine
What is the treatment for hyperammonia levels?
benzoate or phenylbutyrate to lower serum ammonia levels
What composes the urea cycle?
NH4+CO2-->carbamoyl phosphate (rate limiting), this combines with ornithene to from citrulline. Next, aspartate is added to form arginosuccinate, then fumarate is given off and arginine is formed. Last, water is added, urea is released and ornithene is reconstituted
What forms the two nitrogen atoms and the one oxygen atom of urea?
Oxygen from CO2
Nitrogen from NH4 and aspartate
What amino acid is used to from creatinine, urea and NO?
arginine
What amino acid is used to from the porphyrin ring of heme?
glycine
GABA and Glutathione are both derivatives of what amino acid?
glutamate
What are the two possible causes of phenylketonuria?
decreased phenylalanine hydroxylase (Phe-->Tyr) or decreased tetrahydrobiopterin cofactor
What is the cause of alkaptonuria?
homogentistic acid oxidase deficiency (in the Tyr degradtive pathway)
What are the three possible causes of albinism?
tyrosinase (DOPA -->melanin) or defective tyrosine transporters, or lack of neural crest migration
What is deficient in Lesch-Nyan and what builds up?
HGPRT (which would form IMP or GMP from guanine or hypoxanthine), uric acid builds up
What is deficient in patients with SCID?
adenosine deaminase
Where are GLUT-1 and -2 receptors found (non-insulin responsive)
1: RBCs, brain
2: kidney, liver, beta-islet cells
Where are McArdle's effects localized?
muscle (no glycogen phosphorylase activity)
What enzyme is deficient in Von Gierke's?
when glucose 1 phosphate is formed from glycogen breakdown it is conveted to glucose-6-P by phosphoglucomutase and then to glucose by glucose-6-phosphatase. Glucose-6-phosphatase is deficient in Von Gierke's
What are the two X-linked recessive lysosomal storage diseases?
Fabry's and Hunter's
A child has hepatosplenomegaly, aseptic necrosis of the feumur and macrophages that look like crumpled tissue paper. What is the condition, def enzyme and what substrate accumulates?
Gaucher disease is caused by a deficient beta-glucocerebrosidase enzyme leading to the accumulation of glucocerebroside
A young child has peripheral neuropathy of hands/feet, angiokeratomas and cardiovascular and renal dysfunction. What is the condition, def enzyme and what substrate accumulates?
Fabry's disease is due to a alpha-galactosidase A deficiency leading to ceramide trihexoside accumulation
A small child has foam cells, cherry-red spot on macula and HEPATOSPLENOMEGALY. What is the condition, def enzyme and what substrate accumulates?
Nieman-Pick is a deficiency of sphingomyelinase and leads to an accumulation of sphingomyelin
A child has lysosomes with onion skin appearance and developmental delay/regression with a cherry red spot. What is the condition, def enzyme and what substrate accumulates?
Tay-Sachs, hexosaminidase A, GM2 ganglioside accumulates
A child has globoid cells with developmental delay and optic atrophy. What is the condition, def enzyme and what substrate accumulates?
Krabbe's disease is a deficiency of galactocerebrosidase leading to a galactocerebroside accumulation
A child has central and peripheral demyelination with ataxia and dementia. What is the condition, def enzyme and what substrate accumulates?
Metachromatic leukodystrophy is a deficiency of arylsulfatase 1 and results in cerebroside sulfate accumulation
What two deficiencies result in heparin and dermatin sulfate accumulation?

What are the two deficient enzymes?
Hunter's and Hurler's syndrome, Hunter's is more mild without corneal clouding and with aggresive behavior

Hurler's: alpha-L-iduronidase
Hunters: iduronate sulfatase
What ketone is not measurable in the urine?

What are ketone bodies metabolized to in the brain?
beta-hydroxybutryate

acetyl-CoA
What process involves the carnitine shuttle?

What process involves the citrate shuttle?
Fatty acid metabolism involves the carnitine shuttle, while FA synthesis requires the citrate shuttle
What accumulates in carnitene deficiency?
LCFAs
What are the essential fatty acids and the formation of what compound is especially dependent upon them?
linoleic and linolenic acids (and arachadonic acid if linoleic acid is absent) are required for eicosanoid synthesis
What is the function of hormone sensitive lipase?

What is the function of Lipoprotein lipase?
degrade TG stored in adipocytes

LPL: degrade TG in circulating chylomicrons and VLDLs
What is the function of lecithin-cholesterol acyltransferase(LCAT)?

What is the function of cholesterol ester transfer protein (CETP)?
catalyzes esterification of cholesterol

mediate transfer of cholesterol esters to other lipoprotein molecules
Whatis the function of the following apolipoproteins?
A1, B-100, C-II, B-48, E?
A1: activate LCAT
B-100: binds LDL-R to mediate VLDL secretion
C-II: cofactor for LPL
B48: mediates chylomicron secretion
E: mediates Extra (remnant) uptake
What is the principle functional difference between chylomicrons and VLDL?
both deliver TG to peripheral tissues, chylomicrons are formed at the intestine, VLDL is formed at the liver, chylomicrons also deliver cholesterol to the liver
What lipoprotein mediates cholesterol movement from tissues to the liver and acts as a repository for apoC and apoE?
HDL
What are the three types of familial dyslipidemias and their root cause?
I: hyperchylomicronemia is due to LPL deficiency or altered C-II
IIa: hypercholesterolemia due to decreased LDL-R
IV: hypertriglyceridemia du to hepatic overproduction of VLDL
What enzymes are affected by lead poisoning and what accumulates?
ferrochelatase and ALA dehydratase are deficient leading to delta-ALA and coproporphyrin buildup
What enzyme is affected by porphyria cutanea tarda and what accumulates?
uroporphyrinogen decarboxylase is deficient and uroporphyrin accumulates (tea colored)
What enzyme is affected by acute intermittent porphyria and what accumulates?
porphobilinogen deaminase is deficient so porphobilinogen and delta-ALA accumulates
How does UV light help children with jaundice?
UV light converts bilirubin to urine soluable products
What are the two possible conformations of hemeoglobin?

What favors taut over relaxed the other?
taut and relaxed (which has 300x the affinity for oxygen)

Cl, H+, CO2, 2,3-BPG all favor the taut form (right shift)
How does CO2 interact with hemoglobin?
CO2 binds to amino acids in the N-terminus of the globin chains
What does the FISH laboratory technique aid in seeing?
microdeletions or other anomalies at the molecular level
In cloning, how are sites chosen for cleavage of DNA by restriction enzymes?
flanked by palindromic sequences (read the same either way ATCCTA)
What is formed when mRNA is exposed to reverse transcriptases in cloning?
cDNA (lacks introns)
What is the Sanger method of DNA sequencing?
Dideoxynucleotides halt DNA polymerization at each base generating sequences of varying lengths
Transgenic studies in mice can be either constitutive or constitutional, what is the meaning of these terms?
constitutive is the random insertion of a gene into the genome, constitutional is the targerted insertion or deletion through homologous recombination
When one gene has greater than 1 affect on one's phenotype what is this called?

What is the most common example of codominance?

What is it called when a heterozygote produces a protein that prevents the normal gene from functioning?
pleiotropy

blood groups

dominant negative mutation
What is it called when mutations at different loci can cause the same phenotype?

What is it called when there is a tendancy for two alleles to occur together more than expected by chance?

What is heteroplasmy?
locus heterogeneity

linkage disequilibrium

presence of normal and mutated mtDNA causing variable expression of mitochondral disease
Regarding Hardy Weinberg genetics, what is equivalent to the prevalence of an x-linked recessive disease in males? females?
males=q
females=q squared
What is the inheritance of hyperphosphatemic rickets?

What is the inheritance of Leber's hereditary optic neuropathy?
X-linked dominant

mitochondrial
Where is the mutation in von Hippel-Lindau?
VHL (tumor supressor gene) on chromosome 3
Where is the mutation in NF1 and NF2?
17

22
Where is the mutation for Huntingon's disease?
4 (hunt 4 food)
Where is the mutation for Familial adenomatous polyposis?
the APC gene on chromosome 5
What is curative for hereditary spherocytosis?

What lab value is increased?
splenectomy

MCHC
What is the gene that is mutated in acondroplasia?
Fibroblast Growth Factor receptor 3
On what chromosome is the CFTR gene located?

What is the CFTR function in sweat glands?
7

resorb sweat
What are the most common X-linked recessive disorders?
Be Wise, Fool's GOLD Heeds False Hope

Brutons, Wiscott-Aldrich, Fragile X, G6PD def, Ocular albinism, Lesch-Nyan, Duchenne muscular dystrophy, Hemophilia A and B, Fabry's, Hunter's
What are four diseases of trinucleotide repeats?
Huntington's, fragile X, myotonic dystrophy, Friedrich's ataxia
What special labs would point to Down syndrome?
increased beta-HCG, decreased alpha-fetoprotein
How are the hands different between Edward's and Patau?

How does maternal age correlate with chromosome abnormalities?
Patau syndrome is associated with Polydactyly, Edwards children have clenched fists

increasing age=increasing incidence in all three
What is the mutation in cri-du-chat?
congenital deletion of the short arm of chromosome 5
What is a pericentric and a paracentric inversion?
pericentric inversions involve the centromere and proceed through meiosis
What are the two 22q11 syndromes and what are the main symptoms?
velocardiofacial syndrome and DiGeorge syndrome present with varying amounts of CATCH-22

Cardiac abnormalities, Abnormal facies, Thymic Aplasia, Cardiac defects, Hypocalcemia
Cold agglutinins are what type of immunglobulins?
IgM during the recovery phase from a mycoplasma infection
A child presents with multiple neisseria infections, what complement proteins are deficient?
C6-C8 (membrane attack complex)
What cell types are found in the paracortex?
T lymphocytes
What cell types are found in the medullary sinuses and cords of the thymus?
macrophages and plama cells
What is the mechanism by which T and B cells enter via the lymph node from the blood?
through high endothelial venules
A patient has a massive EBV infection, what part of the lymph node enlarges disproportionately?
paracortex
What is the difference between primary and secondary lymph node follicles?
primary follicles are dense and dormant, secondary follicles have pale central germinal centers and are active
To where does the lymphatics from the colon drain?
internal iliac nodes
What is the drainage of the lateral side of the dorsum of the foot?
popliteal nodes
What lymphatics collect in the right lymphatic duct?
right side of head and right arm
Macrophages in the spleen remove what type of organisms?
encapsulated
Where are B-lymphocytes found in the spleen?
follicles within the white pulp
Where are T lymphocytes found in the spleen?
PALS and red pulp with the RBCs
What pouch is the thymus derived from?
3rd
What is the embryonic derivation of lymphocytes?
mesenchymal (loose CT from mesoderm)
Where do T-lymphocytes mature?
at the corticomedullary junction (immature lymphocytes start in the cortex)
A histological section shows Hassel's corpuscles and epithelial reticular cells, where is the slice taken from?
medulla of thymus
What IL causes maturation of a helper T cell into a TH1 cell?

What cytokines do Th1 cells produce?
IL-12

IL-2, IFN-gamma to activate macs and CD8 cells
What IL causes maturation of a helper T cell into a TH2 cell?

What cytokines do TH2 cells produce?

What cytokine inhibits TH2 differentiation?
IL-4

IL-4, IL-5 to help B lymphocytes produce antibody (esp IgE)

IFN-gamma inhibits TH2 differentiation
Where is the antigen loaded on MHC class 1?
rER
Where is the antigen loaded on the MHC II molecule?
acidified endosome
What immune globulin mediates Type 2 (cytotoxic) and Type 3 (immune complex) hypersensitivity?
IgG
Aside from the TCR-MHCII interaction, what is the costimulatory signal for Th cell activation?
B7 on APC binds CD28 on Th cell
Aside from TCR-MHC I, what is the costimulatory signal (cytokine) involved in Tc activation?
IL-2
Aside from random VJ and VDJ (heavy chain) recombination, what are the three other means by which antibody diversity is achieved?

What enzyme is responsible for random addition of nucleotides during recombination?
random combination of heavy and light chains, somatic hypermutation, addition of nucleotides during recombination

terminal deoxynucleotidal transferase
Where is the C terminal of the antibody?
at the Fc region (base)
What two antibodies are expressed on mature B lymphocytes that have not undergone isotype switching?
IgM and IgD
What ligand mediates isotype switching in conjugation with cytokines?
CD40
Where does IgA pick up the secretory component from?
epithelial cells
What constitutes an Ig allotype?

What constitutes an idiotype?
Ig epitope that differs between members of the same species

Ig epitope determined by the uniqueness of the hypervariable region (e.g. all members of an idiotype would respond to only one antigen)
What are the two anti-inflamatory cytokines?
IL-10 and TGF-beta
What cytokines principally stimulates T cells?
IL-2
What IL stimulates bone marrow?
IL-3
What interleukin stimulates class switching to IgE and IgG?
IL-4
What interleukin stimulates IgA production?
IL-5
What IL is the major chemotactic factor for neutrophils?
IL-8

clean up in IL-8
What interleukin secreted by B cells and macrophages activates NK and Th1 cells?
IL-12
What pyogenic IL is responsible for the acute inflamatory response and is secreted by macrophages?
IL-1
What cell lineage has cell surface proteins that are receptors for Fc and C3b?
macrophages
What two complement molecules are essential for causing anaphylaxis?

What characterizes the classic and alternative pathway of complement activation?
C3a and C5a

IgM and IgG activate complement via the classic pathway, molecules on the surface of microbes (such as endotoxins) activate complement via the alternative pathway
In defending against bacterial infections, what two molecules are the primary opsonins?
IgG and C3b
What two molecules prevent complement activation against self-cells?

A deficiency of one of these would lead to what condition?
Decay-accelerating factor and C1 esterase

DAF deficiency is associated with complement mediated lysis of RBCs and paroxysmal nocturnal hemoglobinuria
What complement molecules comprise the MAC?
C5b-9
What complement molecules are important in viral neutralization?
C1-C4
A deficiency of C1 esterase causes what condition?
hereditary angioedema
What effect do interferons have on virally infected cells?
IF-alpha and beta degrade viral mRNA
A patient demonstrates a prolonged parasitic infection, what is the likely cause?
programmed rearrangement of antigenic substances present on trypanosomes
What bacteria has two flagellar varients which aids in its immune avoidance?
salmonella
How is anergy achieved?
T lymphocytes become nonreactive when binding to MHC without costimulatory molecule
What are the three components of an immune complex?
antigen-antibody-complement
Type 1 diabetes is what type of hypersensitivity?
type 4
A patient has low levels of all globulins with recurrent bacterial infections that started at 6 months of age. What is the most likely condition?
Bruton's agammaglobulinemia
Hypocalcemic tetany with recurrent viral and fungal infections?
DiGeorge syndrome
What would an IL-12 receptor deficiency present as?
disseminated mycobacterial infections due to a decreased Th1 response
What is the defect in the hyper IgM syndrome?

What type of infections would predominant?
Defect in the CD40L on CD4 helper T cells leading to an inability to class switch.

severe pyogenic infections early in life
A patient has pyogenic Infections, purpura and eczema, what does this triad point to?
Wiscott-Aldrich, an X-linked defect that rsults in the inability to mount an IgM response to capsular polysaccharides of bacteria
What Ig abnormalities are associated with Wiscott-Aldrich?
low IgM, normal IgE, high IgA
What are the five symptoms associated with Job's syndrome?

What is the cytokine abnormality associated with this condition?
FATED: Facies, Abscesses (staph), retained primary Teeth, high igE, Dermatologic problems

IFN-gamma by helper T cells
Recurrent bacterial infections WITHOUT PUS FORMATION AND DELAYED SEPERATION of the UMBILLICUS?
LFA-1 integrin defect causing leukocyte adhesion deficiency
What is the principle defect of Chedia-Higashi?
failure of fusion of the phagosome with the lysosome
What immune response prevents Candida infection? Dissemination?
candida infection is prevented by T cells, dissemination is prevented by neutrophils
A patient has a defect in DNA repair enzymes with angiomas and ataxia, what is the likely condition?
ataxia telangiectasia
A patient has normal numbers of B-cells with a plasma cell deficiency, wahat is the likely condition and age of incidence?
common variable immunodeficiency can show up in your 20-30s
What is associated with anti-Scl antibodies?
diffuse scleroderma
What is associated with anti-smooth muscle antibodies?
autoimmune hepatitis
What is associated with anti-Jo-1 antibodies?
polymyositis, dermatomyositis
What is associated with c-ANCA?
Wegener's granulomatosis
What is associated with anti-mitochondrial antibodies?
primary billiary cirrhosis
What is associated with anti-U1 RiboNuclearProtein?
mixed connective tissue disease
What 4 conditions are associated wtih HLA-B27
PAIR: psoriasis, ankylosing spondylitis, inflamatory bowell disease, reiter's syndrome
What HLA type is associated wtih Grave's disease and celiac sprue?
HLA B8
What HLA type is associated with MS, hay fever, SLE, and Goodpasture's syndrome?
DR2
DM type 1 is associated with what HLA type?
HLA DR3
DM type 1 AND Rheumatoid Arthritis are associated with what HLA haplotype?
DR4
HLA DR5 is associated with what two conditions?
pernicious anemia and hashimoto's thyroiditis
Steroid responsive neoplastic syndrome is associated with what HLA type?
DR7
What is the MOA of cyclosporin?
binds to cyclophillins to inhibit IL-2 production
What is the MOA of tacrolimus?
binds FK binding protein to prevent IL-2 secretion
What is the MOA of azithioprine?

What drug would interact to increase the toxicity?
antimetabolite precursor of 6-mercapatopurine that interferes with metabolism and synthesis of nucleic acids

allopurinol inh. xanthine oxidase, which breaks down MP
What drug is a monoclonal antibody that binds to the epsilon chain of CD3 on T cells?
muromonab-CD3
What drug binds to mTOR inhibiting the T cell response to IL-2?
sirolimus
What is the MOA of mycophenolate mofetil?
inhibits the de novo synthesis of guanine and blocks lymphocyte production
What drug is a monoclonal antibody with high affinity for IL-2?
daclizumab
What is the use of filgastrim?
G-CSF for recovery of bone marrow
What is the use of sargramostim?
GM-CSF for recovery of bone marrow
What are the uses of alpha interferon?
Hep B and C, Kaposi's, leukemias, malignant melanoma
What is the use of beta-interferon?
MS
What is the treatment for chronic granulomatous disease?
gamma-interferon
What two recombinant cytokines are used to treat thrombocytopenia?
oprelvekin (IL-11) and thrombopoietin
What type of transplant rejection is reversible and what drug may treat it?
acute rejection may be treated by cyclosporine and OKT3
What part of the cell wall gives gram positives their ability to induce TNF and IL-1?
techoic acid
What part of the gram negative structure induces TNF and IL-1?
Lipid A
In what part of the bacterial cell structure are anzymes found (esp. beta-lactamases)?
periplasmic space
What is unique about the capsule of bacillus anthracis?
contains d-glutamate
What structure contains dipicoinic acid and a keratin-like coat?
spore
What is unique about the cell wall of mycoplasma?
does not exist, only has a sterol containing cell membrane
What are the two unique components to gram negative bacteria cell walls?
periplasmic space and an LPS/endotoxin outer membrane
During what phase of bacterial growth are spores produced?
stationary phase
What gram positive is unique in that it has a outer cell membrane/endotoxin?
listeria
Compare the antigenicity and heat stability of exotoxin and endotoxin.
Exotoxins are destroyed at 60 degrees celsius (except stap enterotoxin) and have high antigenicity and toxicity

Endotoxins have low toxicity, low antigenicity and are stable at temperatures of 100 degrees celsius for 1 hour
What three organisms secrete an IgA protease?
s. pneumo, h.flu, neisseria
What organisms use a surface protein to prevent phagocytosis?
group A strep have a phagocytosis preventing M protein
A child comes in with a scalded skin appearance that easily pulls away from the underlying tissue, what organism likely caused this and via what toxin?
Staph aureus giving off exfoliatin
What two cytokines are produced during superantigen infection?
IL-2 and IFN-gamma
What do the heat labile and heat stable toxins of ecoli cause?
heat labile stimulates adenylate cyclase, heat stabile stimulates guanylate cyclase (Labile like the Air, stable like the Ground)
What is the antigen sought in the ASO test and what does it point to?
streptolysin O from s.pyogenes is used to diagnose rheumatic fever
Describe the three parts of anthrax toxin?
Protective Antigen: shuttles the three components into the cell in Trojan-horse fashion
Edema Factor: activate adenylate cyclase to increase cAMP
Leathal Factor:acts as a Zn2+-dependent endoprotease that snips off the N-terminus of mitogen-activated protein kinase kinases (MAPKK). This inhibits these kinases by not allowing them to efficiently bind to their substrates, which leads to altered signaling pathways and ultimately to apoptosis
Activation of Hageman factor by endotoxin causes what?
DIC
What two complement factors are activated by endotoxin?
C3a (edema, hypotension) and C5a (neutrophil chemotaxis)
An alpha hemolytic organism is bile soluable, what is it?
strep pneumo
How are group B strep (agal) and group A strep (pyo) differentiated?
B-BRAS. Group B resistant, group A sensitive
What are the two gram negative rods that are the principle slow fermenters of lactose?
citrobacter, serratia
What organism produces a red pigment?
serratia marascens
Thayer Martin media is used for what organism?

Chocolate agar?

Bordet-gengou (potato agar)?
N. gonorrhea

h.flu

bordatella pertusis
What organisms requires a Tellurite plate with Loffler's media?

Lowenstein-Jensen agar?

Charcoal yeast extract with increased iron and cysteine?
c. diptheria

mycobacteria tuberculosis

legionella
What stain is used to detect tropheryma whippelii?
PAS stains glycogen(t.whippelii is a gram positive organism)
What does a silver stain show?
legionella and fungi
What four organisms can be seen with a Giemsa stain?
borrelia, plasmodium, trypanosomes, chlamydia
What is the term for the direct uptake of DNA from the environment by prokaryotes and eukaryotes?
transformation
What is Hfr to F- conjugation?
F+ plasmid is incorporated into bacterial chromosomal DNA
What is the difference between generalized and specialized transduction?
generalized transduction involves a lytic phage, specialized transduction involves a lysogenic phage both result in bacterial DNA becoming part of the viral genome
By what process is genetic material transferred from chromosomes to plasmids and back?
transposition
What toxins are transferred via specialized (lysogenic) transduction?
ABCDE: shigA-like toxin, Botulism toxin, Cholera toxin, Diptheria toxin, Erythrogenic toxin of strep pyogenes
What are the obligate aerobes?
Nocardia, pseudomonas, mycobacteria tuberculosis, bacillus (Nagging Pests Must Breath)
What are the obligate anaerobes?
Actinomyces
Bacteroides
Clostridium
What do obligate anerobes lack and what type of antibiotics are useless?
lack catalase and/or SOD

aminO2glycosides are ineffective because they require O2 to enter the cell
What are the obligate intracellular bugs?

What are the faculative intracellular bacteria?
chylamydia and rickettsia cannot produce their own ATP

Salmonella, neisseria, brucella, mycobacterium, listeria, francisella, legionella, yersinia (Some Nastly Bugs May Live FaculativeLY)
What is the only way to get rid of spores?

What spores are found in the ground?
autoclave

b. anthracis, clostridium perfringens, c. tetani (other spore formers: b.cereus and c.botulinum)
What are the five ureas positive bugs?
h.pylori, proteus, klebsiella, ureaplasma, staph saphrophyticus
What are the two alpha hemolytic organisms?
strep pneumo and strep viridans
What are the four beta-hemolytic organisms?
staph aureus, listeria monocytogenes, streptococcus agalactiae, strep pyogenes
Antibodies to what component of strep pyogenes causes rheumatic fever?
M protein--but also enhances host defenses
Strep pneumo is the most common agent in what four conditions?
Meningitis
Otitis media
Pneumonia
Sinusitis
What agent should be implicated in sepsis in patients with sickle cell anemia and splenectomy?
strep pnemo
Growth in 6.5% NaCl points to what infectious agent?
enterococci
How does Lancfield grouping categorize types of streptococci?
based upon the differences in C carbohydrate
Where is the noramal place of colonization of strep viridans?
oropharynx
What are two causes of subacute bacterial endocaritis?
strep sangius (viridans) and enterococci
What genus of bacteria are gram positive, spore forming, obligate anerobes?
clostridia
What toxin is used to cause gas gangrene?
lecithinase (alpha toxin)
What is the toxin that diptheria produces and how is diptheria identified microscopically?
ADP ribosylator of EF-2 encoded by a beta-prophage

gram positive rods with metachromatic granules
What bacteria uses actin rockets to move from cell to cell?
listeria monocytogenes
What two bacteria form long filaments which appear fungal and how do you differentiate between the two?
actinomyces and nocardia

actinomyces causes oral-facial abcesses, nocaria causes pulmonary infections in immunocompromised patients
What is the treatment for Nocardia?

Actinomyces?
Nocardia=sulfas

Actinomyces=penicillin
A patient with neisseria meningitis develops DIC and necrotic adrenals, what is the condition called?
Waterhouse-Friderichsen syndrome
What bacteria causes epiglottitis?
h.flu
What is the treatment for those with h.flu meningitis?

What is the treatment for close contact prophylaxis?
cephtriaxone

rifampin
Some species of enterobacteriacae have what three antigens?
O- polysaccaride endotoxin
H-flagella
K-capsular, corresponds to virulence
Describe the motility of salmonella and shigella?
salmonella are motile and disseminate, shigella move by actin polymerization
What species of bacteria produce H2S?

What is the treatment?
salmonella

let it run its course, antibiotic treatment may prolong
What bacterial infection is known to cause pseudoapendicitis or pseudochron's?
yersinia enterocolitica
Reheated meat dishes are notorious for this bug?

What two organisms are common in seafood?
clostridium perfringens

vibrio parahemolyticus and vibriovulnificus (can also infect wounds in contact with contaminated water or shellfish)
What bacteria are known for their ability to grow at 42C?
campylobacter (ox positive too)
What is the only protozoa to cause bloody diarrhea?
entamoeba histolytica
What are the four cAMP inducers (regarding toxins)?
enterotoxigenic ecoli HL toxin, pertussis, vibrio cholera, bacillus anthracis (EF acts as adenylate cyclase, all others act via ADP ribosylating)
What is the difference in action between b.pertussis and v.cholera?
pertussis=cough=off (permanently diables Gi)

cholera=rice water diarrhea=permantly activates Ga
What toxin promotes lymphocytosis by inhibiting chemokine receptors?
pertussis toxin
What is the treatment for legionella?
erythromycin
What agent causes otitis externa?
pseudomonas aeruginosa
What agent causes drug use and diabetic osteomyelitis as well as hot tub folliculitis?
pseudomonas aeruginosa
What is the teatment for pseudomonas aeruginosa?
AMG (gentamicin) + extended spectrum penicillin (piperacillin, ticarcillin)
What is the treatment for H.pylori?
bismuth, tetracyline, metronidazole
What organism is often found in unpasteurized milk and what does it cause?
brucella (unpasteurized milk gives undulant fever)
What is the transmissive agent in franciscella tularensis?

Yersinia pestis?
tick

flea
What is the treatment for gardnerella vaginalis?
metronidazole
What are four scenarios by which one might have TB but not show it on a PPD test?
anergy: sarcoid, immunocompromise, malnutrition, steroids
Where is primary and secondary tuberculosis often localized?
primary: hilar nodes and lower lobe Ghon complex

secondary: upper lobe and fibrocavitary lesion
What are the two broad causes of 2ndary TB?
reactivation or reinfection
A patient with TB develops a lesion on their vertebrae, what is this condition called?
Pott's disease
An armadillo wrangler develops peripheral neuropathy with loss of eyebrows and lumpy earlobes, what are the two possible types of this disease?
leprosy may be either lepromatous or tuberculoid (lepromatous is lethal)
What is the treatment for leprosy?
long term dapsone or dap + rifampin and clofazimime
What two things does rickettsiae require from its host in order to survive?

What is the treatment for ricketsial infection?
CoA and NAD

tetracycline
What is the only type of ricketsia that is transmitted by aerosol and causes pneumonia?

What type is from fleas and causes endemic typhus?

What kind is from a human body louse and causes epidemics?
coxiella

r. typhi

r.prowazekii
What is the difference between r.typhi rash and r.rickettsia rash?
r.ricketsia starts on the WRISTS and goes to the TRUNK, typhi starts on the TRUNK and goes to the WRISTS
Negative Weil-felix points to what organism and disease?

Positive?
Q fever from coxiella burnetii

r.rickettsia and r.typhi
What virus causes a rash on palms and soles?
cocksakie A virus
What is the function of the elementary body phase of chlamydia and the reticulate body phase?
elementary enters, reticulate replicates
What is unusual about the chlamydial cell wall?
lacks muramic acid
What is the only type of chlamydia that has an avian resorvoir?
chlamydia psittaci
What do chlamydia types A-C do?

L1-L3?

D-K?
African Blindness and Chronic infection?

lyphogranuloma venerum

everything else
What are the three spirochetes?

What is the only type visible with aneline dyes?
borrelia, leptospira and treponema

borrelia
A patient has azotemia, severe jaundice, fever, hemorrhage and anemia. What bacteria might have caused this?
leptospira interrogans causing Weil's disease
How does borrelia burgdorferi get from deer to humans?
via Ixodes tick (which also transmits Babesia
What is the treatment for Lyme disease?
doxycycline
What are the three stages of Lyme disease?
Stage 1: erythema chronicum migrans
Stage 2: neurologic and cardiac manifestations
Stage 3: chronic monoarthritis and migratory polyarthritis
What characterizes 2ndary and tertiary syphillis?
2:maculopapular rash, condylomata lata
3: gummas (liver granuloma), neurosphilis, argyll-robertson pupil
A child is born with saber shins, CN VIII deafness, and Huctchinson's teeth, what is the likely cause?
congenital syphillis
Bell's palsy is most often associated with what infectious agent?
borrelia burgdorferi
What things may cause false positives on the VDRL test?
Viruses
Drugs
Rheumatic fever
Lupus and leprosy
I am produced by histoplasmosis and coccidiomycoses, I am asexual, what am I?
conidia (spores)
What does candida produce at 37C and 20C?
pseudohyphae at 20C, germ tubes at 37C
I am the only bacteria that has cholesterol in my membrane?
mycoplasma pneumonia
I am big, broad based, and budding yeast?
Blastomycosis
What is similar between histoplasmosis, blastomcosis, coccidiomycosis, and paracoccidiomycosis?
(cold=mold, heat=yeast)
A person who spent the past year in rural guatemala returns with captain wheel yeast?
paracoccidiomycosis
What yeast is treated with selenium sulfide and miconazole?
tinea versicolor
What 3 agents may be responsible for pruritic lesions with central clearing?

Which has a pet resorvoir?
microsporum, trichophyton, epidermophyton

micosporum
On KOH prep what would you see in a tinea scraping?
mold formation (not dimorphic)
What does a methenamine silver stain of lung tissue that gives a positive result point to?

What is the treatment?
pneumocystis jiroveci

TMP/SMX dapsone, pentamidine
I am a cigar shaped budding yeast, I am monomorphic and I live on vegetation?

What is the treatment?
sporthrinx schenckii

itraconazole or potassium iodide
What is the treatment for african sleeping sickness in CNS and blood borne?
CNS=melarsoprol
Blood=suramin
What is the treatment for Chagas?

What is the vector?
trpanosoma cruzi infects humans via the Reduviid bug and is treated with nitrofurtimox
A patient has macrophages containing amastigotes, what condition does he have and how is this treated?
leishmania donovani is treated wtih sodium stibogluconate
What protozoa has both maltese cross and ring forms and how is it treated?
babesia is treated with quinine and clindamycin
What agent causes mild diahhrea in immunocompetent but severe diarrhea in AIDS patients?
cryptosporidium parvum
What agent causes bloody diarrhea, liver abcesses and shows RBCs within amoebas on blood smear?

What is the treatment?
entamoeba histolytica

metronidazole and iodoquinol
What is the primary treatment for pinworm, roundworm and hookworm?
mebendazole or pyrantel pamoate
What three helminths may enter the body through the skin?
strongyloides stercoralis, ancyclostoma duodenale, and necator americanus (the latter two are hookworms)
What helminth may enter the body through eggs found in undercooked meat and cause granuloma formation and blindness (if gran in eye) and visceral larva migrans?

What is the treatment?
toxocara canis is treated with diethylcarbamazine
A woman comes in with elphantiasis (blocked lymph channels). It is later discovered that the vector was a female mosquito. What helminth is the likely agent and how is it treated?
wuchereria bancrofti is treated with diethylcarbamazine
A patient enters presenting with eye pain, you can see something crawling under the conjunctiva, what is the likely agent and how is it treated?
loa loa is treated with diethylcarbamazine
Which Hep viruses have a lipid envelop and what is the significance of this?
B,C,D are susceptible to bile acids
What is the genome of the hep viruses?
A: ss+RNA
B: dsDNA
C: ss+RNA
D: ss-RNA
E: ss+RNA
What agent causes river blindness with lizard skin?

How is it treated?

What causes an allergic reaction in some individuals?
onchocerca volvulus

ivermectin

microfilaria
What helminth is picked up in contaminated drinking water and how is it treated?
dracunculus medinesis is treated wtih niridazole
Eggs in dog feces may cause this helminthic infection. How is it treated?
echinococcus granulosus is treated with albendazole
What helminth infection may give a swiss-cheese appearance to the brain and how is it treated (intestinal or neurocysticercosis)?
taenia solium

intestinal: praziquantel
neuro: albendazole
What helminth infection causes inflamatoin of teh muscle and what is the treatment?
trichinella spiralis is treated with thiabendazole
What are the three flukes and how are they treated?
schistosoma, clonorchis sinesis, paragonismus westermani are all treated with praziquantel
What is the host/method of transmission for schistosoma, clonorchis sinensis, and paragonimus westermani?
schisto: snails
clonorchis: undercooked fish
paragonimus: undercooked crab meat
What are the three nematodes that enter through undercooked foods?
enterobius, trichinella, ascaris
What parasite causes: brain cysts with seizures?
taenia solium
What parasite causes: liver cysts?
echinococcus granulosus
What parasite causes: B12 def?
diphyllobothrium latum
What parasite causes:billiary tract disease?
clonorchis sinensis
What parasite causes:hemoptysis?
paragonium westermani
What parasite causes: portal HTN?
schistosoma mansoni
What parasite causes:hematuria and bladder cancer?
schistosoma haematobium
What parasites cause: microcytic anemia?
ancylostoma, necator
What parasite causes:perianal pruritis?
enterobius (pinworm)
A child is born with low birth weight, microcephaly, seizures, petechial rash similar to the "blueberry muffin" rash of congenital rubella syndrome, and moderate hepatosplenomegaly (with jaundice), what is the likely cause?
congenital CMV
What is the only single stranded DNA virus family?
parvovirus
What are the three circular DNA viruses?
papilloma, polyoma, hepadnavirus
What is the only dsRNA virus family?
reoviridae
What are the naked (nonenveloped) viruses?

Where do they aquire their coat from?
Naked CPR and PAPP smear: calicivirus, picornavirus, reovirus, parvovirus, adenovirus, papilloma, polyoma

all (except herpesviruses) from cell membrane
What is the only virus type which takes its coat from the nuclear membrane?
herpesviruses
What is the only diploid virus?
retroviruses which have identical ssRNA molecules
What is the only DNA virus to replicate in the cytoplasm?

What are the only RNA viruses to replicate in the nucleus?
poxvirus

influenza and retroviruses
Herpesvirus

NAME THAT STRUCTURE!
DNA enveloped virus
HBV

NAME THAT STRUCTURE!
DNA enveloped virus
Smallpox virus

NAME THAT STRUCTURE!
DNA enveloped virus
Adenovirus

NAME THAT STRUCTURE!
DNA nucleocapsid virus
Papilloma virus

NAME THAT STRUCTURE!
DNA nucleocapsid virus
Parvovirus

NAME THAT STRUCTURE!
DNA nucleocapsid virus
Influenza/parainfluenza

NAME THAT STRUCTURE!
RNA enveloped virus
Measles, mumps, rubella

NAME THAT STRUCTURE!
RNA enveloped virus
RSV, HTLV, HIV

NAME THAT STRUCTURE!
RNA enveloped virus
Rabies virus

NAME THAT STRUCTURE!
RNA enveloped virus
Enterovirus (polio, cosakie, echo, HAV), rhinovirus, reovirus (rotavirus)

NAME THAT STRUCTURE!
RNA nucleocapsid virus
What is the only non-icosahedral DNA virus?
poxvirus
What virus is the cause of roseola?
HHV-6
What virus causes conjunctivitis (pink eye) and febrile pharyngitis?
adenovirus
A patient with HIV develops progressive multifocal leukoencephalopathy, what is the causative agent and its viral class?
JC virus in the polyomavirus
This is the largest DNA virus. It is double stranded and linear. What are the three most common viruses in its viral family?
Poxvirus: small pox, vaccinia (milkmaid blisters), molluscum contagiosum
HCV, West Nile, Yellow fever, Dengue, and St. Louis encephalitis are all members of this viral family?
Flaviviruses with +ssRNA
What are the viral families that can use their own genome as mRNA?
These Fellows Can Punch Copies of Rna: Toga, Flavi, Calici, Picorna, Corona, Retro
What virus is the number one cause of fatal diarrhea in children?
rotavirus
What converts -sense RNA to mRNA to be processed by the cell?
RNA polymerase
What are the DNA viruses?
HHAPPPy!: Herpes, Hepadna, Adeno, Parvo, Papilloma, Polyoma, Poxvirus
This virus is responsible for 90% of epidemic non-bacterial outbreaks of gastroenteritis. What family is it in?
norovirus in the calicivirus
What are the two members of the family of dsRNA viruses?
Reoviruses: reovirus (Colorado tick fever) and rotavirus
What are the three members of the Togavirus family?
(picture a German wearing a toga while riding a horse from east and west berlin) rubella (german measles), eastern equine enchephalitis, western equine encephalitis
Aside from HIV, what is the other important retrovirus and what is their capsid symetry?
HTLV, icosahedral
The Coronavirus family has two important members, what are they?
SARS and coronavirus
What are the four members of the paramyoxovirus family?
PaRaMyxovirus: parainfluenza (croup), RSV, Measles (rubeola), Mumps
Ebola an Marburg are in this viral family.
Filovirus, -ssRNA
Lymphocytic choriomenigitis and Lassa fever both result from viruses in this family.
Arenaviruses
What is the one member of Hepeviridae?
Hep E
All of the -ssRNA viruses have what capsid symetry?
Hepeviridae, orthomyxo, paramyxo, rhabdo, filo, arena, bunya, delta are all helical
What are the four Bunyaviruses?
California encephalitis, sandfly/rift valley fever, crimean-congo hemorrhagic fever, hantavirus (hemorrhagic fever + pneumonia)
What are the four killed virus vaccines?
RIP Always: Rabies, Influenza, salk Polio, and hAv
Two viruses exchange genes by crossing over of chromosomes?
recombination
What processes is the exchange of segments of genes that causes worldwide pandemics?

What are the segmented viruses?

How many segments does an influenza virus have?
reassortment

BOAR: bunya, orthomyxo, arena, reo

8
What is it called when a fully functioning virus fixes a malfunctioning viral segment of genome?
complementation
What are the negative sense RNA viruses?
Always Bring Polymerase, Or Fail Replication Horribly: Arena, Bunya, Paramyxo, Orthomyxo, Filo, Rhabdo, Hepatitis Delta
How is HHV-8 spread?
sexual contact
What does the Tzank test look for?
HSV-1,-2 or VZV associated giant cells within an opened lesion
What type of cells circulate abnormally with EBV infection?
Downy cells; abnormal CD8+ cells
What infection is characterized by Cowdry type A inclusion bodies?
HSV
RNA is produces one large polypeptide that is cleavved by proteases into functional proteins, what does this characterize?
Picornavirus
Aedes mosquitos transmit what virus?
Yellow fever virus
Councilman bodies, black vomit, and high fever point to what infectious agent?
yellow fever
Villous destruction with atrophy leads to decreased absorbtion of Na and water with this virus.
Rotavirus (fecal-oral)
What are the primary two treatments for influenza A and B?
zanamivir and oseltamivir (neuraminidase inhibitors)
What are the viral families of the hepatitis viruses?
A--picornavirus
B--hepadnavirus
C--flavivirus
D--delta
E--hepeviridae
After two months, people with HIV can be positively identified, what is the two test procedure?
ELISA to rule out, Western blot to rule in
During the latent phase of HIV, where does the virus replicate?
lymph nodes
Oral hairy leukoplakia is caused by what viral infection in AIDS patients?
EBV
What shape do normal prions have and how does this mutate?
alpha-helix to beta-sheet
What type of osteomyelitis are IV drug users at greater risk for developing than the general population?
pseudomonas aeruginosa
Swarming motility on agar?
proteus mirabilis
What STD is associated with rectal strictures?
lymphogranuloma venerum from c.trach
What bug is a frequent contaminent of respiratory equipment?
pseudomonas aeruginosa
What drugs specifically disrupt bacterial cell membranes?
polymyxins
What drug used to treat TB blocks mRNA synthesis?
rifampin
Where is the site of action of linezolid, clindamycin, chloramphenicol, and macrolides?
block protein synthesis at 50s subunit
Where is the site of action of the AMGs and tetracyclines?
30s subunit
What are the 6 bacteriocidal antibiotics?
Vancomycin, Fluoroquinolones, Penicillin, AMGs, Cephs, Metronidazole (Very Finely Proficient At Cell Murder)
What is naphcillins primary use and what differentiates it from the penicillins?
Naphcillins are too large to be inhibited by beta-lactamases and are primarily used for non resistant staph (use naph for staph, except with altered binding site)
What is the difference between amoxicillin and ampicillin?
both inactivated by penicillinases, amOxicillin has better Oral availability
Amox/ampicillin are principally used in what infections?
HELPS kill enterococci: Haemophillus, Ecoli, Listeria, Proteus, Salmonella
What is Ticarcillin, Carbenicillin, and Piperacillin used for?
Take Care of Pseudomonas
What is unique about 3rd gen cephs (ceftriaxone, cephtazidime, cefotaxime)?
BBB penetration, used to treat serious gram negative infections
What is cefepime's (4th gen) specialty?
better against pseudomonas and other gram +
What is the spectrum for 1st and 2nd gens cephs?
1: Proteus, Ecoli Klebsiella (PEK)
2: Haemophillus, Enterobacter, Neisseria, Proteus, Ecoli, Klebsiella (HEN PEK)
What drug treats Klebsiella, Serratia and Pseudomonas, has no activity against gram +, is synergistic with AMGs, and is used for penicillin-allergic patients.
aztreonam
How does the addition of cilastin improve imipenem?
Cilastin decreases the renal tubular inactivation of imipenem, this is especially used in life threatening infections and enterobacter due to side effects
How is resistance achieved against Vanco?
d-ala d-ala become d-ala d-lac
What is neomycin's principle use?
pretreatment for bowell surgery (ineffective against anerobes as it requires O2 for uptake)
What are the bugs treated by tetracylcines?
VACUUM THe BedRoom: vibrio, acne, chlamydia, ureaplasma urealyticum, mycoplasma pneumonia, tularemia, h.pylori, borrelia burgdorferi, ricketsia
What is the use of clindamycin?
bacteroides fragelis, clostridium perfringens (anerobes above the diaphramn)
What is the primary drug for nocardia?
sulfonamide
What drug is used to treat recurrent UTIs, shigella, salmonella, pneumocystis jiroveci?
TMP/SMX
What treats anerobes below the diaphramn and protozoans?
metronidazol
What is the use of polymyxins?
resistant gram negatives
What is the treatment for vancomycin resistant enterococcus?
linezolid or streptogrannins
What anti-TB agent causes optic neuropathy (red-green color blindness)?
ethambutol
What is the prophylaxis and treatment for M.avium intracellulare?
azithromycin is prophylaxis, azithro, rifampin, ethambutol,streptomycin is treatment
What is the treatment for m.leprae?
dapsone, rifampin, clofazimine
What is the prophylaxis for m.TB?
INH
What anti-TB causes a decreased synthesis of mycolic acids?

Inhibits DNA dependent RNA polymerase?
INH

Rifampin
How is resistance to AMGs achieved?

Macrolides?

MRSA to methicillin?
acetylation, adenylation, phosphorlyation

methylation of rRNA near ribosome binding site

altered penicillin binding protein
What two drugs bind ergosterol?
amphotericin B and nystatin
What are the uses of nystatin?
swish and swallow for oral candida, topical for vagina or diaper rash
What drugs inhibit ergosterol synthesis?
azoles
What is the MOA of flucytosine?
inhibits DNA synthesis by conversion to 5-FU
What drug inhibits fungal cell wall synthesis?
caspofungin
What is caspofungins primary use?
invasive aspergillosis
What anti-microbial inhibits squalene epoxidase and is used to treat dermatophytoses?
terbafine for toes
What drug interferes with fungal microtubule formation and thus inhibits mitosis?
griseofulvin (dermatophytes)
What is the MOA an use of amantadine?
block influenza penetration/uncoating, used in Parkinson's to increase dopamine release from intact nerve terminals
What is the MOA of zanamivir and oseltamivir and their use?
inhibit influenza A and B's neuraminidase
Despite its severe terratogenicity, ribavirin is used to treat RSV, and chronic hep C through what mechanism?
inhibit guanine nucleotide synthesis by competitively inhibiting IMP dehydrogenase
What drug is monophosphorylated to inhibit DNA polymerase? In what three viruses does this occur?
Acyclovir is useful in HSV, VZV and EBV
What is the chief use of ganciclovir?
CMV (requires phosphorylation)
What is the MOA of foscarnet and main use?
foscarnet is a DNA polymerase inhibitor that is useful for CMV retinitis and acyclovir resistant HSV
What is the mechanism of resistance for acyclovir, ganciclovir and foscarnet?
A and G results from lack of thymidine kinase, G and F from DNA polymerase mutation
Which anti-viral is a pyrophosphate analog?
foscarnet
What are the protease inhibitors?
-NAVIR tease a protease (saquinavir etc.)
What protease inhibitor may cause thrombocytopenia?
indinavir
What are the reverse transcriptase inhibitors?
zidovudane, didanosine, zalcitabine, stavudine, lamivudine, abacavir (NUCLEOSIDES)

nevirapine, efavirenz, delavirdine (NON NUCLEOSIDES)

Never Ever Deliver nucleosides
What drugs can be used to reduce bone marrow suppression from reverse transcriptase inhibitors?
GM-CSF and erythropoetin
What anti-viral is a fusion inhibitor and what subunit does it bind?
enfuvirtide binds gp41 subunit
What interferon is used for hep B and C and Kaposi's sarcoma?
INF-alpha
What interferon is used in MS?
IFN-beta
What interferon is used in NADPH oxidase deficiency?
IFN-gamma
What drugs should not be used during pregnancy?
SAFE Moms Take Really Good Care: Sulfonamides, AMGs, Fluoroquinolones, Erythromycin, Metronidazole, Tetracyclines, Ribavirin, Griseofulvin, Chloramphenicol

erythromycin causes acute cholestatic hepatitis in moms
What are the rule of 2s, 3s, and 4s regarding embryology?
2nd week: two germ layers-epiblast and hypoblast, two cavities-amniotic sac, yolk sac, two components to placenta-cyto and syncytiotrophoblast

3rd week: three germ layers-ecto, meso, endoderm

4th week: 4 limbs, 4 heart chambers
When does the primitive streak, notochord and neural plate form?
Week 3
When is organogenesis?
Wk 3-8
When does the heart begin to beat and limb buds form?
week 4
The fetus first moves during this week?
week 8
A couple is coming in for an ultrasound to determine the sex of their child, when is the earliest they could do this?
10th week
The adenohypophysis and lens of the eye are both derived from?
surface ectoderm
What are the 12 major derivatives of neural crest cells?
ANS, dorsal root ganglia, melanocytes, chromaffin cells of adrenal medulla, enterochromaffin cells, pia and arachnoid, celiac ganglion, schwann cells, odontoblasts, parafollicular cells of thyroid, laryngeal cartilage, bones of the skull
What invaginates to form the primative streak and what does it give rise to?
epiblast invaginates to form the primitive streak and it gives rise to intraembryonic mesoderm and endoderm
What are the mesodermally derived abdominal organs?
spleen, adrenal cortex, kidneys
Dura mater, urogenital structures and bone are all derived from what tissue type?
mesoderm
What is the function of the notochord and what does it persist as in adults?
induces neuroectoderm formation and remains as the intervertebral disk
Anal atresia, cardiac defects, vertebral defects, tracheoesophageal fistula, renal defects and limb defects all result from defects in this embryonic tissue?
mesoderm
ACE inhibitors during pregnancy would cause what malformation in child?
renal damage
Cocaine during pregnancy would cause what malformation in child?
addiction and abnormal development
DES during pregnancy would cause what malformation in child?
vaginal clear cell carcinoma
Iodide during pregnancy would cause what malformation in child?
congenital goiter or hypothyroidism
Thalidomide during pregnancy would cause what malformation in child?
high risk for limb defects
Tobacco during pregnancy would cause what malformation in child?
preterm labor, ADHD, placental problems
Compare and contrast mono and dizygotic twins regarding chorion, amnion, placenta.
both have 2 amniotic sacs, monozygotes share a placenta and chorion

Amnion=around
Chorion=close
What layer of the placenta secretes HCG?
syncytiotrophoblast
What is the maternal component of the placenta?
decidua basalis
A typical umbillical cord has two arteries and one vein, what might a child with one artery have?
congenital and chromosomal abnormalities
What is the function of the urachus?
connects fetal bladder with allantois to remove nitrogenous waste
The bulbus cordis forms?
The smooth part of the left and right ventricle
The primitive ventricle forms?
The trabeculated part of teh left and right ventricle
The truncus arteriosus forms?
The ascending aorta and pulmonary trunk
The primitive atria forms?
The trabeculated left and right atria
The left horn of the sinus venosus forms?
coronary sinus
The right horn of the sinus venosus forms?
smooth part of right atrium
The right and left common cardinal veins form?
SVC
What is the three step process for the formation of the interventricular septum?
1 muscular septum forms leaving an opening called the intraventricular foramen

2 aorticopulmonary septum divides the trunchus arteriosus into aortic and pulmonary trunks

3 the aorticopulmonary septum fuses with the muscular septum to form the membranous interventricular septum
Which part of the adult septum is fomred by the septum primum?
caudal, the septum secundum develops after the septum primum and remains as the cranial portion
What constitutes the valve of the foramen ovale?
septum primum
What chains comprise fetal hemoglobin?
alpha2 gamma2
From what period does fetal blood originate in the yolk sac?
3-8wk
From what period does hematopoeisis occur in the liver?
6-30wk
From what period does hematopoesis occur in the spleen?
9-28wk
From what period does fetal hematopoesis occur in the bone marrow?
28wk onward
What conducts blood from the umbilical vein to the IVC?
ductus veinosus
Where does most blood entering the right atria of fetal circulation pass?
through the foramen ovale
Deoxygenated blood from the SVC gets shunted to the lower body of the fetus via what route?
from the pulmonary artery through the ductus arteriosus
What closes a patent ductus and what wouldd keep it open?
indomethicin closes, prostaglandins would keep it open
The umbillical vein becomes what in the adult?
ligamentum teres hepatis contained in falciform ligament
The umbiLical arteries become what in the adult?
mediaL umbilical ligaments
The ductus arteriosus becomes what in the adult?
ligamentum arteriosum
The foramen ovale becomes what in the adult?
fossa ovalis
The ductus venosus becomes what in the adult?
ligamentum venosum
The allaNtois becomes what in the adult?
mediaN umbillical ligament
A patent allantois results in a __?
urachal cyst
What is the function of the urachus?
connect the bladder to the allantois
What is the derivative of the first aortic arch?
part of maxillary artery
What are the derivatives of the 2nd aortic arch?
stapedial and hyoid
What are the derivatives of the third aortic arch?
common carotid and proximal internal carotid
What are the derivatives from the fourth aortic arch?
aortic arch and proximal part of right subclavian
What are the derivatives of the 6th aortic arch?
left pulmonary arteries and ductus arteriosus
What are the embryonic tissues that form the clefts, arches, and pouches?
CAP: cleft=ectoderm, arch=mesoderm (and neural crest), pouch=endoderm
What nerves are derived from the first brachial arch?
V2 and V3
What nerve is derived from the second brachial arch?
VII
The Ninth Cranial Nerve is derived from what branchial arch?
3
Aside from the muscles of mastication what other 5 muscles are derived from the 1st brachial arch?
mylohyoid, anterior digastric, tensor tympani, tensor veli palatini, anterior 2/3 of tongue
The mandible, malleus, incus, and sphenomandibular ligament are all derived from Meckel's cartilage, what arch is this from?
first
The stapes, styloid process, lesser horn of hyoid and stylohyoid ligament are all derived from Reichert's cartilage from what brachial arch?
second
Aside from the muscles of facial expression, what 3 other muscles are derived from the 2nd brachial arch?
stapedius, stylohyoid, posterior digastric
What are the bone and muscle derivatives of the 3rd arch?
stylopharyngeus and greater horn of hyoid
What is the sensory innervation of the middle ear?
IX
What supplies parasympathetic fibres to the parotid gland via the otic ganglion?
IX
What receives visceral sensory fibers from the carotid bodies.
IX
The carotid sinus baroreceptors are innervated by the sinus nerve of Hering, which is a branch of?
IX
What two muscles are innervated by the XI nerve?
sternocleidomastoid and trapezius
What nerve lies on top of the carotid sheath in the neck?
XII
A lesion of the XII nerve causes the tongue to deviate to what side?
same side
What innervates the palatoglossus?
X
What is the only pharyngeal muscle not innervated by the vagus?
stylopharyngeus
What two arches form the posterior 1/3 of the tongue?
arches 3 and 4
Aside from the pharyngeal constrictors, what muscles are derived from the 4th arch?
cricothyroid, levator veli palatini
What is the only laryngeal muscle supplied by the external branch of the superior laryngeal?
cricothyroid
What is the innervation of all intrinsic laryngeal muscles except the cricothyroid?
recurrent laryngeal off of X
What muscles are derived from the 6th arch?
all intrinsic muscles of larynx except for cricothyroid
What nerve is derived from the 4th arch?
superior laryngeal
What nerve is derived from the 6th arch?
recurrent laryngeal
What arches make up the posterior third of the tongue?
3 and 4
The thyroid cartilage, and epiglottic cartilage are both from what arch?
4th
The cricoid cartilage, arytenoid cartilages, and corniculate cartilage are all from what arch?
6th
What is unique about the nerves derived from brachial arches (V2,V3,VII,IX,X)?
These are the only cranial nerves with both sensory and motor components
Clefts 2-4 form what structures and what later obliterates this structure?
temporary cervical sinuses which are obliterated by 2nd arch mesenchyme
What forms the external auditory meatus?
1st cleft
Aberrent development of the third and fourth pouches leads to what syndrome?
DiGeorge's syndrome
What pouch forms the superior parathroids?
dorsal 4th
What pouch forms the inferior parathyroids?
dorsal 3rd
What does the 2nd pouch form?
epithelial lining of palatine tonsil
What does the ventral wings of the third pouch form?
thymus
What forms the tympanic membrane?
1st branchial membrane
What are the muscles of the tongue derived from?
occipital myotomes
A cyst in the lateral neck points to what condition of development?

Medial neck?
persistent cerival sinus (clefts 2-4)

persistent thyroglossal duct (may also form pyramidal lobe of thyroid)
The uvula deviates to what side regarding the lesion?
away from the Xth nerve lesion
What 4 components make up the diaphramn?
Several Parts Build Diaphragmn: septum transversum, pleuroperitoneal folds, body wall, dorsal mesentary of esophagus
What does the ventral pancreatic bud form?
pancreatic head, uncinate and main duct
The spleen arises from __ mesentary but is supplied by an artery of the __?
dorsal, foregut
What is the derivation of the pancreas?
endodermal foregut
Gastroschisis is due to what condition?
failure of fusion of lateral body folds
What does the fetal urogenital sinus develop into?
bladder, urethra, alantois
What are the derivatives of the mesonephric wolfian ducts?
SEED: Seminal vesicles, Epididymis, Ejaculatory duct, Ductus Deferens
What are the derivatives of the paramesonephric (Mullerian ducts)?
fallopian tube, uterus, part of vagina
What is the function of the SRY gene on Y chromosome?
testes determining factor causes secretion of Mullerian inh. hormone secreted by testes supresses paramesonephric ducts, androgens are increased leading to mesonephric duct development
When does the pronephros degenerate?
wk 4
During what phase does the mesonephros function as a kidney?
first trimester
What stimulates the formatino of male genitalia over female genitalia?
DHT vs estrogen
What does the genital tubercle become in males and females?
M: glans penis
F: glans clitoris
What does the urogenital sinus become in males.
bulbourethral glands, prostate, corpus spongiosum
What is the female equivalent of the prostate gland?
urethral and paraurethral glands of Skene
What is the female equivalent of the bulbourethral glands?
greater vestibular glands of bartholin
What are the female derivatives of the urogenital sinus?
vestibular bulbs, greater vestibular glands, urethral and paraurethral glands of skene
What are the male and femal derivatives of the urogenital fold?
ventral shaft of penis and penile urethra; labia minora
What is the embryonic tissue that forms the labia majora in females and the scrotum in males?
labioscrotal swelling
Cardiac rhabdomyomas are most often seen in what condition?
tuberous sclerosis
Children with retinoblastoma are at increased risk for what other tumor?
osteosarcoma
What HPV types are most associated with cervical carcinoma?
16 and 18
Amyloid deposits in the joints of patients on dialysis contain what type of amyloid?
beta2-microglobulin
Ribosomal detachment and chromatin clumping are examples of __ change?
reversible
Ca influx into the cell and lysosomal rupture would be associated with what mitochondrial change?
irreversible change causing increased mitochondrial permeability
Aside from TB and sarcoid, what 5 other conditions may cause granulomas?
syphillis, leprosy, bartonella, fungal pneumonias, Chron's disease
Aside from inflammation, what other condition may cause protein rich fluid to exude?
lymphatic blockage (specific gravity of exudate >1.020)
What mediates neutrophil rolling along the endothelium?
E-selectin and P-selectin on endothelium binding sialyl Lewis X on neutrophil
What mediates tight binding of neutrophil to endothemium?
ICAM-1 on vasc endothelium binds to LFA-1 (integrin) on leukocyte
What phase of drug metabolism may generate free radicals?
phase 1
What type of amyloid is formed from multiple myeloma?
Ig 'L'ight chains forming AL
Chronic inflamatory diseases for what type of amyloid?
SAA formin AA amyloid--'A'cute phase reactant
What type of amyloid is deposited in DM type 2?
amylin from AE--think E=Endocrine
What type of amyloid is deposited in the heart with aging?
transthyretin from AF--think AF=old Fogies
A patient has A-CAL amyloid deposits, what disease does this point to and what is it derived from?
medulary carcinoma of the thyroid, A-CAL from CALcitonin
A patient has beta-amyloid deposits, what does this point to and what does the beta amyloid come from?
Alzheimers, from APP
What is the dialysis associated beta2 microglobulin derived from?
MHC class I protein
What enzymes are required for a tumor to invade the basement membrane?
hydrolases and collagenases
Abnormal cells lacking differentiation, e.g. primitive cells of same tissue is what process?
anaplasia
What has more prognostic value, stage or grade?
stage
What neoplasms are associated with XP?
squamous cell>basal cell, melanoma
Chronic atrophic gastritis, pernicious anemia, postsurgical gastric remnants are associated with what neoplasms?
gastric adenocarcinoma
What 3 neoplasms are associated with tuberous sclerosis?
astrocytoma, angiomyolipoma, cardiac rhabdomyoma
What neoplasms are associated with Plummer-Vinson syndrome?
squamous cell carcinoma of esophagus
A patient has esophageal webs, atrophic glossitis, and anemia. What is the name of this condition and what is the underlying cause?
Plummer-Vinson is due to Fe deficiency
What 2 neoplasms are associated with Paget's disease?
secondary osteosarcoma, fibrosarcoma
What neoplasms are associated with autoimmune diseases?
lymphomas
What neoplasms are associated with radiation exposure?
sarcoma
NAME THAT CANCER FROM ITS ONCOGENE: abl
CML
NAME THAT CANCER FROM ITS ONCOGENE: c-myc
Burkitt's lymphoma
NAME THAT CANCER FROM ITS ONCOGENE: bcl-2
Follicular and undifferentiated lymphomas (inhibits apoptosis)
NAME THAT CANCER FROM ITS ONCOGENE: erb-B2
breast, ovarian, gastric
NAME THAT CANCER FROM ITS ONCOGENE: Ras
Colon carcinoma
NAME THAT CANCER FROM ITS ONCOGENE: L-myc
lung tumor
NAME THAT CANCER FROM ITS ONCOGENE: N-myc
neuroblastoma
NAME THAT CANCER FROM ITS ONCOGENE: ret
MEN types II and III
NAME THAT CANCER FROM ITS ONCOGENE: c-kit
gastrointestinal stromal tumor
NAME THAT CANCER and CHROMOSOME FROM ITS TUMOR SUPRESSOR MUTATION: Rb
13q; retinoblastoma, osteosarcoma
NAME THAT CANCER and CHROMOSOME FROM ITS TUMOR SUPRESSOR MUTATION: BRCA1
17q; breast and ovarian
NAME THAT CANCER and CHROMOSOME FROM ITS TUMOR SUPRESSOR MUTATION: BRCA2
13q: breast
NAME THAT 'syndrome' and CHROMOSOME FROM ITS TUMOR SUPRESSOR MUTATION: p53
17p; Li-fraumeni
Persons with __ are at risk for a wide range of malignancies, with particularly high occurrences of breast cancer, brain tumors, acute leukemia, soft tissue sarcomas, bone sarcomas, and adrenal cortical carcinoma.
Li-fraumeni syndrome
NAME THAT CANCER and CHROMOSOME FROM ITS TUMOR SUPRESSOR GENE: p16
9p; melanoma
NAME THAT CANCER and CHROMOSOME FROM ITS TUMOR SUPRESSOR GENE: APC
5q; colorectal cancer
NAME THAT CANCER and CHROMOSOME FROM ITS TUMOR SUPRESSOR GENE: WT1
11p; Wilms tumor
NAME THAT CANCER and CHROMOSOME FROM ITS TUMOR SUPRESSOR GENE: NF1
17q; NF type 1
NAME THAT CANCER and CHROMOSOME FROM ITS TUMOR SUPRESSOR GENE: NF2
22q, NF type 2
NAME THAT CANCER and CHROMOSOME FROM ITS TUMOR SUPRESSOR GENE: DPC
18q, pancreatic cancer (Deleted in Pancreatic Cancer)
NAME THAT CANCER and CHROMOSOME FROM ITS TUMOR SUPRESSOR GENE: DCC
18q; colon cancer (Deleted in Colon cancer)
A patient has elevated prostatic acid phosphatase, what does this point to?
prostatic carcinoma
Colorectal, pancreatic, breast and gastric carcinomas all secrete this tumor marker?
CEA
What two tumors give off alpha-fetoprotein?
yolk sac tumor and hepatocellular carcinoma
Hydratidiform moles, choriocarcinomas and gestational trophoblastic tumors all give off what?
beta-hCG (they spell HCG)
CA-125 is given off by what two tumor types?
ovarian and malignant epithelial tumors
S-100 is a tumor marker for what three cancers?
melanoma, neural tumors, astrocytomas
Aside from bone mets and obstructive biliary disease, what other condition may cause elevated alk phos?
Paget's disease of bone
Neuroblastoma's, lung and gastric cancers all have this tumor marker?
bombesin
Hairy cell leukemia has this tumor marker?
TRAP
CA-19-9 in the blood points to what condition?
pancreatic adenocarcinoma
Burkitt's lymphoma and nasopharyngeal carcinoma are both caused by this virus?
EBV
Body cavity fluid B-cell lymphoma is associated with what virus?
HHV-8
Angiosarcomas of the liver may be caused by what carcinogen?
vinyl chloride
CCL4 has been known to cause?
centrilobar necrosis, fatty change
Aflatoxins may cause?
Hepatocellular carcinoma
Aside from mesothelioma, asbestos may cause what other cancer?
bronchogenic carcinoma
Renal cell carcinoma and transitional cell carcinoma is associated with what carcinogen?
cigarette smoke
Esophageal and stomach cancers are most often associated with what carcinogen?
nitrosamines
Arsenic may cause what cancer type?
squamous cell carcinoma
Napthelene/aniline dyes may cause?
transitional cell carcinoma
Alkylating agents may cause what type of cancer?
leukemia
ACTH or ACTH-like peptide is a paraneoplastic syndrome from what cancer type?
small cell carcinoma
ADH may be elevated in what two cancer types?
small cell carcinoma and intracranial neoplasms
Squamous cell lung carcinoma, renal cell carcinoma and breast carcinoma may cause what paraneoplastic hormones to be secreted?
PTH-related peptide, TGF-beta, TNF, IL-1
Erythropoietin may be seen with what two cancers?
renal cell and hemangioblastoma
Lambert-Eaton syndrome is caused by what specifically and may be due to what two cancers?
antibodies against Ca channels at NM junction due to thymoma or small cell lung carcinoma
What four conditions may cause psammomas?
PSaMMoma: papillary (thyroid), Serous (ovary), Meningioma, Mesothelioma
What tumors most often metastasize to the brain?
Lots of Bad Stuff Kills Glia: lung, breast, skin (melanoma), Kidney (renal cell), GI
What tumors most often metastasize to the liver?
colon>stomach>pancreas>breast>lung
What tumors may metastasize to bone?
PTT Barnum Loves Kids: Prostate, Thyroid, Testes, Breast, Lung, Kidney
What tumors are lytic to bone, blastic to bone, or both to bone?
lung=lytic, prostate=blastic, breast=both
What are the three most common cancers in men?
prostate, lung, colorectal
What are the three most common cancers in females?
breast, lung, colorectal
What cancers have the highest mortality in men and women?
lung highest in both, then prostate or breast