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21 Cards in this Set

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What is meant by DNA replication being a semi-conservative model?

One double helix serves as a template for two new identical double helices


....with each new double helix having one strand from the old double helix and one newly synthesised strand what is the

What is the leading strand?

The continuous strand of the replication fork

What is the lagging strand?

The discontinuous strand of the replication fork


Okazaki fragments

What is DNA

Double stranded molecule with strands of opposite polarity


Held together by hydrogen bonding between bases

Give brief overview of replication in prokaryotes

Usually bidirectional


260bp sequence in E.Coli


Initiated by DNaA in E.coli


DNA is 5’ to 3’ so template 3’ to 5’

What does DNaA do?

Initiates replication

What does DNaA Helicase do?

Unwinds DNA (100,000 no/min)

What does Topoisomerase (gryase) do?

Relieves supercoiling caused by helicase

What does Single-strand Binding Protein (SSB) do?

Binds to expose bases

Define the 3 essential properties common to all DNA polymerases

Unable to separate the two DNA strands that are to be copied


Can only elongate a pre-existing DNA or RNA strands and unable to initiate chains


Catalyze nucleotide addition at the 3-Hydroxyl end of a growing chain...therefore strand grown in a 5’ to 3’ direction

What does Polymerase 3 do? (PolIII)

Synthesizes leading and lagging strands (synthesis most of the DNA)


With a high fidelity

What is proofreading and editing by DNA polymerase?

In the 3’ to 5’ direction with exonuclease...read more into it

The problems with replication I. Eukaryote

Chromosomal ends


Packaging DNA in the nucleus

Where does replication start?

Replication fork

What is replication?

Semi-discontinuous

What are the basics of DNA replication?

Always synthesised in 5’ to 3’


Therefore template is always 3’ to 5’.


One direction is leading the other is lagging (short fragments)

What is condensation?

The process of how DNA is packaged

Explain the levels of condensation

Nucleosomes


30nm fibre


Scaffold associated


Different regions condensed to different levels at different times

Describe nucleosomes

Used positively charged histones H2A,B H3,4


DNA wrapped around complex of eight histone molecules


One takes 146bp of DNA


BEADS (HISTOSOMES?)

Describe the 30nm fibre in condensation

Six nucleosomes arranges in a coil


Needs HISTONE H1

What does the 30nm protect?

The scaffold and attaches every 45,000 to 90,000 bps