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299 Cards in this Set
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Lecture 53: Biochem 4
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Glycogen
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What are the arterial branches off the common hepatic artery?
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Gastroduodenal artery
•Branches -Right gastro-omental artery -Anterior superior pancreaticoduodenal artery Right gastric artery Proper hepatic artery •Branches -Left hepatic artery -Right hepatic artery |
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What cell type secretes the histamine that stimulates the histamine receptor on parietal cells thereby increasing gastric acid production?
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Enterochromaffin like cells (ECL cells)
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An infant present to the ER with vomiting. What presenting features would lead you to suspect congenital pyloric stenosis?
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Age: 2-6 weeks old
Male > female -Classic presentation – 1st born male Nonbilious, projectile vomiting Dehydration Metabolic alkalosis (hypokalemic, hypochloremic) Palpable olive-like bulge on abdominal exam (***HIGH YIELD***) |
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Pompe Disease
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Infantile form: Cardiomegaly and Early death
Adult form: Diaphragm weakness and Respiratory failure Due to: Deficiency of lysosomal a-1,4-glucosidase |
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What is the rate-limiting enzyme for the following metabolic pathway?
Glycolysis |
Phosphofructokinase-1
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RLE (Rate-limiting enzyme): Gluconeogenesis
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Fructose-1,6-bisphosphatase
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RLE: Glycogenesis
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Glycogen synthase
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RLE: Glycogenolysis
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Glycogen phosphorylase
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Which enzyme converts glucose-6-phosphage to glucose?
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Glucose-6-phosphatase
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Which glycogen storage disease matches each of the following phases? (***HIGH YIELD***)
Glycogen phosphorylase deficiency |
Type V (McArdle disease)
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Glucose-6-phosphatase deficiency
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Type I (von Gierke disease)
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Lactic acidosis, hyperlipidemia, hyperuricemia (gout)
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Type I (von Gierke disease)
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α-1,6-glucosidase deficiency
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Type III (Cori disease)
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α-1,4-glucosidase deficiency
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Type II (Pompe disease)
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Cardiomegaly
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Type II (Pompe disease, infantile type)
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Diaphragm weakness leading to respiratory failure
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Type II (Pompe disease, adult type)
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Increased glycogen in the liver; severe fasting hypoglycemia
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Type I (von Gierke disease)
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Hepatomegaly, hypoglycemia, hyperlipidemia (normal kidneys, lactate, and uric acid)
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Type III (Cori disease)
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Painful muscle cramps, myoglobinuria with strenuous exercise
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Type V (McArdle disease)
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Severe hepatosplenomegaly, enlarged kidneys
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Type I (von Gierke disease)
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Lecture 54: Biochem 5
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Energy
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What are the different RNA polymerases in eukaryotes?
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RNA polymerase I: makes rRNA
RNA polymerase II: makes mRNA RNA polymerase III: makes tRNA |
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In which order of elimination (zero order first) would you see a linear decrease in the plasma concentration of a substance when plotted against time?
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Zero order
*Rate of elimination is INDEPENDENT of the concentration of the substance |
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What is the equation for Gibbs free energy?
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Delta G = Delta H – T Delta S
G = Gibbs’s free energy H = energy/enthalpy (heat change in constant pressure rxns) S = entropy/disorder/randomness |
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Why are alanine and glutamine found in such high concentrations in the blood?
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They are the 2 major carriers of nitrogen from tissues
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What is generally involved in transamination?
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Transfer of the amino group of an amino acid to
a- ketoglutarate to form glutamate The remaining deaminated amino acid is a keto-acid (such as pyruvate) that is used in energy metabolism |
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What enzyme catalyzes transamination in the alanine cycle cycle?
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Aminotransferase
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How are aminotransferases named?
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By donor of the amino group (alanine aminotransferase converts alanine to pyruvate and forms glutamate)
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In addition to substrates, what is required by all aminotransferases?
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Pyridoxal phosphate (a derivative of vitamin B6)
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What are the 2 most important aminotransferase enzymes? What reaction do they catalyze?
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Alanine aminotransferase (ALT):
-alanine + a- ketoglutarate <--- ---> glutamate + pyruvate Aspartate aminotransferase (AST): -glutamate + oxaloacetate <---- ----> a-ketoglutarate + aspartate |
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Cofactors of Pyruvate Dehydrogenase
*** HIGH YIELD *** |
“Tender loving care for no one”
Thiamine (vit. B1) to make TPP Lipoic acid CoA (comes from vit. B5) FAD (comes from vit B2) NAD (comes from vit. B3, Niacin) |
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Arsenic exposure
KNOW! |
Arsenic inhibits Lipoic acid
Manifests as: -Garlic breath -Vomiting -Rice water stool Look like gastritis with garlic breath |
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TCA cycle 3 enzymes to KNOW***
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Citrate synthase
Isocitrate dehydrogenase (very heavily regulated) a-ketoglutarate Dehydrogenase -Same cofactors as Pyruvate Dehydrogenase -“Tender loving care for no one” |
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Substances the inhibit Complex I, NADH reductase
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Amytal (barbiturate)
Rotenone (fish poison) Methy-phenylpyridinium (MPP) -Comes from MPTP (which is created when druggies try to may make synthetic Meperidine/ Opoids) -Causes Parkinson’s symptoms |
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Substances that inhibit Complex III
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Inhibited by: Antimycin A
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Substances that inhibit Complex IV
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Cyanide (CN-)
Sodium azide (N3-) Carbon monoxide (CO) Hydrogen sulfide (H2S) |
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What are the possible products of pyruvate?
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Acetyl-CoA
Lactic acid Alanine Oxaloacetate |
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What are the two main nitrogen transporters in the blood? (***KNOW***)
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Alanine
Glutamine |
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What are the major regulatory enzymes of citric acid cycle?
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Citrate synthase
Isocitrate dehydrogenase (rate-limiting step) a-ketoglutarate dehydrogenase |
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What substances are known to inhibit the complexes of the electron transport chain?
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Complex I, NADH reductase inhibited by:
-Amytal (barbiturate) -Rotenone (fish poison) -Methy-phenylpyridinium (MPP) (Comes from MPTP) •Complex III Inhibited by: Antimycin A Complex IV inhibited by: -Cyanide (CN-) -Sodium azide (N3-) -Carbon monoxide (CO) -Hydrogen sulfide (H2S) |
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What substances can increase the permeability of the inner mitochondrial membrane, thereby decreasing ATP synthesis but increasing heat generation?
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Aspirin
Thermogenin 2,4-DNP *These are uncoupling agents |
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5 cofactors that are required to complete the Pyruvate Dehydrogenase Complex
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Thiamine (vit. B1) to make TPP
Lipoic acid CoA (comes from vit. B5) FAD (comes from vit B2) NAD (comes from vit. B3, Niacin) |
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Lecture 55: Biochem 6
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HMP Shunt and Other Sugars
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What are the features of Plummer-Vinson syndrome?
|
Dysphagia from esophageal webs
Glossitis Iron deficiency |
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Explain why methanol is such a toxic substance.
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Methanol metabolized to formaldehyde leading to:
-Metabolic acidosis -Retinal damage and blindness |
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A woman commonly develops intense muscle cramps and darkening of her urine after exercise. What is her diagnosis?
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McArdle disease (classic presentation)
* Causes myoglobinura with strenuous exercise |
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What are the components of the HMP shunt (pentose phosphate pathway)
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G6p-----> (2) NADPH + Ribulose- 5- Phosphate
Via Glucose -6- P- dehydrogenase Ribulose-5-P----> PRPP (final product of pathway) |
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What to the enzymes NADPH oxidase, Superoxide dismutase, and Myeloperoxidase catalyze?
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The oxidative burst:
NADPH oxidase: O2 ----->O2- Superoxide dismutase: O2- -----> H2O2 Myeloperoxidase: H2O2 ----> HOCl *Chronic Granulomatous Disease -Caused by: Deficiency in NADPH oxidase -Catalse + organisms especially dangerous |
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Describe essential fructosuria
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Fructokinase defect/deficiency
Can't use fructose as an energy source Benign condition resulting in increase fructose in the blood and urine Cause dieresis because fructose acts as an osmole and brings more water into the urine |
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Describe Fructose intolerance
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Caused by Aldolase B deficiency
Accumulation of fructose-1- phosphate Inhibits glycosis and glyconeogenesis Results in : -Hypoglycemia -Vomiting -Jaundice -Cirrhosis |
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Describe Galactoskinase Deficiency
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Galactose accumulates if galactose is present in the diet
Can cause cataracts in infants |
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Describe Classic Galactosemia
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Absence of Galactose-1-phosphate uridyltransferase
S/S: -Severe cataracts -Hepatomegaly -Cirrhosis -Failure to thrive -Mental retardation Tx: exclude galactose and lactose from diet |
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What is the rate-limiting step of the pentose phosphate pathway?
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Glucose-6-phosphate dehydrogenase (G6PD)
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Which tissue of the body use the pentose phosphate pathway?
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Red blood cells
Liver Adrenal cortex Mammary glands |
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Explain why a deficiency of the enzyme that is the rate-limiter for the HMP shunt can result in hemolytic anemia?
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G6PD generates NADPH
NADPH is used to produce reduced glutathione Without G6PD -- RBC oxidative damage-- hemolysis |
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What are the symptoms of classic galactosemia?
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Failure to thrive
Mental retardation Hepatomegaly Jaundice Infantile cataracts |
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Galactokinase deficiency
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Galactokinase deficiency... Well that's an easy one
|
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Aldolase B Deficiency
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Fructose intolerance
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Lactase deficiency
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Lactose intolerance
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Galactose-1-phosphate uridyltransferase deficiency
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Galactosemia
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Fructokinase deficiency
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Essential fructosuria
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G6PD Deficiency
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X-linked recessive
Stressors: -Infection -Drugs: Antimalarials, Sulfonamides, Fava beans Causes: Non-immune hemolytic anemia |
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Lecture 56: Biochem 7
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Fuel Use
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What substances are well known for causing hemolytic anemia in patients with G6PD deficiency?
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Fava beans
Sulfa drugs Primaquine Isoniazid High-dose aspirin Ibuprofen Nitrofurantoin Dapsone Naphthalene |
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What are the 4 important pharmacokinetic equations?
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Vd = (amount of drug given in IV form/ concentration of drug in plasma)
Clearance (CL) = (0.7 x Vd/ t ½) Loading dose (LD) = Css x Vd Maintenance dose (MD) = Css x CL |
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What is seen histologically in patients with celiac sprue?
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Blunting of villi
Hyperplastic crypts Lymphoctyes in the lamina propria |
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What fuels are produced and used in the post-absorptive period?
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Produced: Glucose from gluconeogenesis & Fatty acids from adipose tissue
Used: Muscle, brain, and other tissues predominantly glucose |
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How does the pattern of fuel production and usage change in early starvation (24 hours after the last meal)?
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•Produced: Glucose from gluconeogenesis & Fatty acids from adipose tissue
•Used: Brain uses predominantly glucose & Muscles and other tissues use some glucose but predominantly fatty acids |
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In intermediate starvation (48 hours after the last meal), how does the pattern of fuel production and consumption change?
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•Produced:
-Glucose from gluconeogenesis -Fatty acids from adipose tissue -Ketone bodies from the liver •Used: -Brain uses predominantly glucose but also some ketone bodies -Muscles and other tissue use predominantly fatty acids but also some ketone bodies |
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What metabolic scenario favors the synthesis of ketone bodies?
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When production of acetyl-CoA from oxidations of fatty acid exceeds the oxidative capacity of the TCA cycle
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What is the pattern of fuel utilization and production in prolonged starvation (5 days after last meal)?
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•Produced
-Glucose from gluconeogenesis -Faty acids form adipose tissue -Ketone bodies from the liver •Used -Brain uses predominantly ketone bodies -Muscles and other tissue use predominantly fatty acids but also some ketone bodies |
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Kwashiorkor
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Protein malnutrition
Causes skin lesion, edema, liver malfunction, fatty change of liver (because APOB 100 is not made and put on chylomicrons to leave the liver), skin and hair depigmentation Porker’s—skinny child with protubrent belly because of edema and hepatomegly |
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Marasmus
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Energy malnutrition
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What is the primary energy source in a patient that has not eaten in two days?
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Fatty acids
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What hormone stimulates the storage of lipids in the fed state?
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Insulin
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What is the rate-limiting enzyme in ketone body synthesis?
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HMG CoA Synthase
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A stressed physician comes home from work, consumes 7 or 8 shots of tequila in rapid succession before dinner, and becomes hypoglycemic. Why did she become hypoglycemic?
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•Ethanol metabolism generates NADH
-Pyruvate --- lactate -Oxaloacetate -- malate •No longer have pyruvate or oxaloacetate to undergo gluconeogenesis ---- hypoglycemia |
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What are some of the hallmark features of kwashiorkor?
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Protein malnutrition
Edema and ascites Anemia Malfunction of the liver (fatty change) Skin lesions Skin and hair depigmentation |
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It’s the process of generating glucose for energy during periods of fasting or starvation.
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Gluconeogenesis
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It’s the ketone body that causes the breath of DKA patients to smell sweet or fruity.
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Acetone
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It’s the ketone body used for energy in the CNS for energy during periods of prolonged starvation.
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Beta-hydroxybutyrate
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It’s the only source of energy that RBCs can metabolize.
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Glucose
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Its metabolism yields 9 kilocalories of energy per gram, more than either protein or carbohydrates.
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Fat
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Lecture 57: Endocrine 10
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Obesity
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What co-factors are required for the function of pyruvate dehydrogenase? What other enzyme requires the same co-factors?
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•Co-factors required for the function of Pyruvate dehydrogenase
-Thiamine pyrophosphate -Lipoic acid -CoA -FAD -NAD •Other enzyme that requires the same co-factors a–ketoglutarate dehydrogenase |
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What medications are used to shrink prolactinomas?
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•Dopamine agonists:
Bromocriptine Cabergoline |
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What are the functions of interleukins 1-5?
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•“Hot T-bone stEAk”
Hot : IL-1 causes fever T-bone: - IL-2 is a T-cell stimulator -IL-3 is a bone marrow stimulator stEAk -IL-4 enhances production of IgE and IgG -IL-5 is associated with IgA and eosinophils |
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BMI Ranges (***HIGH YIELD***)
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≥ 30 – obese
25.0-29.9 – overweight 18.5-24.9 – normal, healthy weight < 18.5 – underweight |
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Hypothalamus Nuclei involved in Regulating Hunger and Food Intake
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Paraventricular nuclei
Dorsal medial nuclei Arcuate nucleus Lateral hypothalamus Ventromedial nuclei |
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What stimulates and inhibits the lateral hypothalamus?
KNOW*** |
Stimulated by hunger
Inhibited by anorexia Inhibited by Leptin (KNOW) |
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What stimulates and inhibits the Ventromedial nuclei
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Stimulated by satiety
Destroyed by hyperphagia Stimulated by Leptin (KNOW) |
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Hormonal Regulation of Fat Utilization (***HIGH YIELD***)
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Both cause – INCREASED sympathetic stimulation
-Heavy exercise -Stress: Increase NE & glucocorticoids |
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Causes of Lipodystrophy
High Yield*** |
Leptin deficiency
HIV HIV medications (protease inhibitors Sites of insulin injection |
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Metabolic Syndrome
3 Stars *** |
Diagnosis based on any 3 of the following:
-Abdominal Obesity: waist circumference > or = 40in (102cm), or > or = 35in (88cm) in women (recognize that not all metabolic syndromes patients are overweight) -Triglycerides > or = 150 mg/dL -HDL <40 mg/dl in men, <50 mg/dl -BP > or = 130/85 -Fasting serum glucose > or = 100 mg/dl (or 2hr post oral glucose > or = 140 mg/dl) |
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What are the five categories of criteria for the diagnosis of metabolic syndrome? (HIGH YIELD)
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Abdominal obesity
Triglycerides Low HDL BP Glucose |
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What liver disease is associated with obesity? (HIGH YIELD)
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Non-alcoholic steatohepatitis (NASH)
*Suspect with chronically elevated LFTs |
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At what BMI is a patient considered obese? (HIGH YIELD)
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BMI ≥ 30
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Lecture 58: GI 9
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Hepatocytes and Cirrhosis
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What immunodeficiency matches each of the following statements?
Neutrophils fail to respond to chemotactic stimuli |
Job syndrome (hyper IgE syndrome)
Leukocyte adhesion deficiency syndrome |
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Adenosine deaminase deficiency
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SCID
|
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Failure of endodermal development
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DiGeorge syndrome
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Defective tyrosine kinase gene
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Bruton agammaglobulinemia
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Associated with high levels of IgE
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Job syndrome (hyper IgE syndrome)
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How does hexokinase differ from glucokinase?
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•Hexokinase
-Found – everywhere -Insulin: doesn’t induce -Low Km -Low Vmax •Glucokinase -Found – Liver, pancreas ( cells) -Insulin: induces -High Km -High Vmax |
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MOA: Protease inhibitors
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Inhibit viral assembly
Block the protease enzyme |
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MOA: Nucleoside reverse transcriptase inhibitors
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Nucleic acid analogs
Inhibit reverse transcriptase Prevent incorporation of the viral genome into the host DNA |
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MOA: Non-nucleoside reverse transcriptase inhibitors
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Inhibit reverse transcriptase by binding directly and non-competitively to the enzyme
Irreversible inhibitors Prevent the incorporation of the viral genome into the host DNA |
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MOA: Fusion inhibitors
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Bind viral glycoprotein 41
Inhibit fusion with CD4 cells |
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Gilbert syndrome
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Slight problem with bilirubin uptake
Mild deficiency in UDP-GT Higher levels of indirect bilirubin Clinically insignificant |
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Crigler-Najjar syndrome Type I
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Complete absence of UDP-GT
S/S—jaundice in first few days of life -- kernicturis Treatment: •Phototherapy (bili light) •Plasmapheresis •Liver transplant |
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Crigler-Najjar syndrome Type II
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Mutated UDP-GT (less severe than Type 1)
|
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Alcoholic Liver Disease
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“A Scotch and Tonic”
AST > ALT 2:1 Depletion of ALT possibly due to B6 deficiency |
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What enzyme is responsible for the conjugation of bilirubin?
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UDP-glucoronyl transferase
|
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Mildly decreased UDPGT
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Gilbert syndrome
Crigler-Najjar syndrome, type 2 |
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Completely absent UDPGT
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Crigler-Najjar syndrome, type 1
|
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Grossly black liver
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Dubin-Johnson syndrome
|
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Responds to Phenobarbital
|
Crigler-Najjar syndrome, type 2
Gilbert syndrome |
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Treatment includes plasmapheresis and phototherapy
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Crigler-Najjar syndrome, type 1
|
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Asymptomatic unless under physical stress (alcohol, infection)
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Gilbert syndrome
|
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What are the signs of portal hypertension?
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Esophageal varices
Hematemesis Melena Hemorrhoids Caput medusa Splenomegaly Ascites |
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Triglyceride accumulation in hepatocytes
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Fatty liver disease
|
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Eosinophilic inclusions in the cytoplasm of hepatocytes
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Mallory bodies
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Cancer closely linked to cirrhosis
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Hepatocellular carcinoma
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Severe hyperbilirubinemia in a neonate
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Crigler-Najjar syndrome, type 1
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Mild, benign hyperbilirubinemia
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Gilbert syndrome
|
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What common disorder is associated with benign asymptomatic elevation of indirect bilirubin?
|
Gilbert syndrome
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Lecture 59: GI 10
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Liver Pathology
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After the loss of his job, a 35 year old man has diarrhea and hematochezia. Intestinal biopsy shows transmural inflammation. What is the diagnosis?
|
Crohn’s disease
|
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What effect will a competitive antagonist have on efficacy and potency?
|
Increase Km
Decrease potency No change in efficacy |
|
What effect does stress have on adipocytes?
|
Stress increases sympathetic tone
Activates hormone-sensitive TG lipase in fat cells: -Rapid breakdown of TGs -Mobilization of fatty acids Anterior pituitary releases ACTH -Adrenal cortex secretes more Glucocorticoids |
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Budd-Chiari Syndrome
|
Hepatomegaly, ascities, abdominal pain, liver failure
Portal hypertension Absence of JVD (KEY) Congestion of liver |
|
Reye’s Syndrome
|
Seen in Children given Aspirin
Child also has a Viral Infection Hepatoencephalopathy (Liver & )Brain Damage to mitochondria |
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Wilson Disease
|
Cooper not incooperated into the bile
Copper accumulation in: Liver, Brain, Cornea, Kidneys, Joints Clinical presentation: -Cirrhosis -Corneal deposits (Kayser-Fleischer ring) -Hepatocellular carcinoma -Hemolytic anemia -Basal ganglia degeneration -Parkinsonian symptoms -Hepaticencephalopathy -Dementia -Fanconi’s syndrome (Proximal tubule dysfunction) Treatment: Penicillamine |
|
Hemochromatosis (bronze diabetes) Triad
KNOW*** |
Cirrhosis
Diabetes mellitus Skin pigmentation |
|
Hemochromatosis primary, secondary, and treatment
|
•Primary hemochromatosis: Autosomal recessive disorder
•Secondary hemochromatosis: Transfusions (chronic) •Treatment: Phlebotomy, Deferoxamine |
|
Hepatocellular Carcinoma risk factors
|
Hepatitis B
Hepatitis C Wilson disease Hemochromatosis a 1-antitrypsin deficiency Alcoholic cirrhosis Carcinogen exposure |
|
Hepatocellular Carcinoma Serum Marker
KNOW*** |
a–fetoprotein (AFP)
|
|
Alcoholic cirrhosis
|
AST:ALT will be >2:1
|
|
Biliary tract
|
Increased GGT
Increased Alk Phos |
|
Bone formation
|
Increased Alk Phos
|
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Budd-Chiari
|
NO JVD
Ascites |
|
Reye’s syndrome
|
ASA
Ped’s Virus |
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Wilson’s Disease
|
Copper
Decreased cerulopasmin Kayser-Fleischer ring Penicillamine |
|
Hemochromatosis
|
Iron
Bronze diabetes Increased ferritin Decreased TIBC Increased transferrin saturation Phlebotomy Deferoxamine |
|
a1-antitrypsin deficiency
|
Liver
Lung: Emphysema (panaciner) |
|
What is seen in Budd-Chiari syndrome? What conditions are associated with Budd-Chiari syndrome?
|
Occulusion of the IVC of hepatic veins
Associated with: -Polycythemia vera -Pregnancy -Hepatocellular carcinoma |
|
What is the mechanism by which aspirin can cause Reye syndrome?
|
Metabolites of aspirin inhibit mitochondrial enzymes
Decreased B-oxidation |
|
A young man presents with ataxia and tremors. He has brown pigmentation in a ring around the periphery of his cornea. What treatment should he receive?
|
Wilson Disease
Treatment – penicillamine |
|
What is the underlying problem in Wilson disease? What are the characteristics of Wilson disease? What is the treatment for Wilson disease?
|
Underlying problem:
-Impaired copper excretion -Body does not put copper into bile appropriately Characteristics: -Asterixis -Basal ganglia degeneration -Decreased ceruloplasmin -Cirrhosis -Kayser-Fleischer rings -Copper accumulation -Dementia -Dyskinesia -Dysarthria Treatment – penicillamine |
|
What is the classic triad of symptoms in hemochromatosis? What lab tests are used to diagnose hemochromatosis? What is the treatment?
|
Classic triad:
-Diabetes -Bronzing of the skin -Cirrhosis Lab tests: -Elevated ferritin -Elevated transferring saturation -Elevated serum iron -Decreased TIBC Treatment -Phlebotomy -Deferoxamine |
|
What are the risk factors for the development of hepatocellular carcinoma?
|
Hepatitis B
Hepatitis C Wilson disease Hemochromatosis a1-antitrypsin deficiency Alcoholic cirrhosis Carcinogen exposure |
|
Hepatomegaly, abdominal pain, ascites
|
Budd-Chiari syndrome
|
|
Green/yellow/ brown corneal deposits
|
Keyser-Fleisher rings
|
|
Low serum ceruloplasmin
|
Wilson disease
|
|
Cirrhosis, diabetes and hyperpigmentation
|
Hemochromatosis
|
|
Lecture 60: GI 11
|
Hepatitis
|
|
What is the result of a glycolytic enzyme deficiency? What is the result of a deficiency in pyruvate dehydrogenase?
|
•Glycolytic enzyme deficiency
-RBC hemolysis •Deficiency in pyruvate dehydrogenase -Neurologic defects |
|
Which substance serves as chemotactic agents for leukocytes?
|
IL-8
Leukotriene B4 C5a Kallikrein |
|
What enzyme is inhibited by PPIs? Name 2 different PPIs
|
Hydrogen potassium ATPase
Common PPIs: -Omeprazole -Lansoprazole -Pantoprazole -Exomeprazole |
|
Identify the hepatitis B status of each of the following patients based on their hepatitis B serologic markers.
HepBsAg- Negative HepBsAB- Positive HepBcAb- Positive |
Recovery
|
|
HepBsAg- Negative
HepBsAB- Negative HepBcAb- Positive |
Window
|
|
HepBsAg- Positive
HepBsAB- Negative HepBcAb- Positive IgM |
Acute infection
|
|
HepBsAg- positive
HepBsAB- negative HepBcAb- positive IgG |
Chronic infection
|
|
HepBsAg- negative
HepBsAB- positive HepBcAb- negative |
Immunized
|
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Early acute infection
|
HBsAg: positive
HBsAb: negative HBcAb: +IgM HBeAg: positive HBeAb: negative |
|
Window period
|
HBsAg: negative
HBsAb: negative HBcAb: +IgM |
|
Chronic infection with Increased transmissibility
|
HBsAg: positive
HBsAb: negative HBcAb: +IgG HBeAg: POSITIVE HBeAb: NEGATIVE |
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Chronic infection with Decreased transmissibility
|
HBsAg: positive
HBsAb: negative HBcAb: +IgG HBeAg: NEGATIVE HBeAb: POSITIVE |
|
Past infection
|
HBsAg: negative
HBsAb: positive HBcAb:+IgG HBeAg: negative HBeAb: positive |
|
Vaccinated
|
HBsAg: negative
HBsAb: positive HBcAb: +IgG HBeAg: negative HBeAb: negative |
|
What medications are used in the treatment of chronic hepatitis B and C?
|
•Interferon alpha: Chronic hepatitis B and C
•Rabavirin: Chronic hepatitis C |
|
What antibodies can be used to help make the diagnosis of autoimmune hepatitis?
|
•ANA (+), Anti-smooth muscle Ab (+)
•Anti-liver-kidney microsomal Ab (+) •Anti-mitochondrial Ab (-) |
|
Rapid Fire Fact: Treatment for chronic hepatitis
|
Interferon alpha
|
|
What serologic marker for hepatitis B indicates contagiousness?
|
“BE Ware”
Hepatitis “B” “E”nvelope Antigen (HBeAg) |
|
Lecture 61: GI 12
|
Biliary Tract
|
|
What cocktail of medications is commonly taken by patient suffering from severe cirrhosis and what do they do?
|
Lactulose--- treats hepatic encephalopathy by decreasing ammonia
Vitamin K--- Maximizes clotting potential Diuretics--- prevent ascities and edema B-blocker--- to prevent bleeding from esophageal varices |
|
What is the cause of chronic granulomatous disease? What are the consequences of chronic granulomatous disease?
|
Causes: Lack of NADPH oxidase activity; Phagocytes can engulf bacteria, but cannot generate free radicals (Impotent phagocytes)
Consequences: Susceptible to opportunistic infections -S. aureus -Salmonella -Klebsiella • Aspergillus |
|
Which immunoglobulin isotype is associated with eosinophilia? Which cytokine is associated with differentiation of eosinophils?
|
Immunoglobulin -- IgE
Cytokine -- IL-5 |
|
DDx of Unconjugated Hyperbilirubinemias
|
Increased bilirubin production:
-Hemolytic anemia -Sickle cell disease -Hematoma breakdown Impaired bilirubin uptake and storage -Post viral hepatitis -Rifampin Decreased UDP-GT activity -Gilbert syndrome -Crigler-Najjar syndrome, type I and II -Neonatal physiologic jaundice |
|
DDx of Conjugated Hyperbilirubinemias
|
Impaired transport
-Dubin-Johnson syndrome -Rotor syndrome Biliary epithelial damage -Hepatitis -Cirrhosis -Liver failure Intrahepatic biliary obstruction -Primary biliary cirrhosis -Sclerosing cholangitis -Chlorpromazine and arsenic Extrahepatic biliary obstruction -Pancreatic neoplasm -Pancreatitis -Cholangiocarcinoma -Choledocholithiasis |
|
Describe Primary Sclerosing Cholangitis (HIGH YIELD FACTS TO KNOW)
|
“Beads on a string” on ERCP (endoscopic retrograde cholangiopancreatography)
Men around age 40 60% have a positive pANCA Associated with -Ulcerative colitis -Cholangiocarcinoma |
|
Primary Biliary Cirrhosis
|
90% of patients are middle-aged women
Positive anti-mitochondrial antibody (AMA) Associated with other autoimmune disorders Treat with ursodil |
|
Cholelithiasis classic risk factors
|
Fat (overweight/obesity)
Fertile Female Forty Dx: RUQ ultrasound |
|
Charcot’s Triad of Cholangitis (KNOW)
|
Jaundice
Fever Right upper quadrant pain |
|
Reynold’s Pentad of Cholangitis
|
Jaundice
Fever Right upper quadrant pain Hypotension Altered mental status |
|
What is the fate of bilirubin after it is conjugated and secreted into the GI tract?
|
•Bacteria convert it to urobilinogen
•Most is excreted in the stool as stercobilin •Some is reabsorbed/recycled in bile •Tiny amount excreted in the urine as urobilin |
|
What enzyme is functioning suboptimally in newborns with physiologic jaundice?
|
UDP-Glucuronyl Transferase
|
|
What are some of the intrahepatic and extrahepatic causes of biliary obstruction?
|
•Intrahepatic
-Primary biliary cirrhosis -Primary sclerosing cholangitis -Drugs •Extrahepatic -Pancreatic neoplasm -Choledocholithiasis -Pancreatitis -Cholangiocarcinoma |
|
What is the difference between primary biliary cirrhosis and primary sclerosing cholangitis?
|
Primary Biliary Cirrohosis
-Positive AMA -Middle-aged females -Autoimmune disease (CREST scleroderma) Primary Sclerosing Cholangitis -Positive pANCA -Males over 40 -Ulcerative colitis and cholangiocarcinoma -“Beads on a string” on ERCP |
|
What are some of the risk factors for the development of cholesterol gallstones?
|
Fat
Fertile Female Forty |
|
Lecture 62: Biochem 8
|
Lipids
|
|
What are the 3 most common types of thyroid cancer?
|
Papillary carcinoma (most common)
Follicular carcinoma Medullary carcinoma (3rd most common) |
|
What are the side effects of orlistat?
|
Steatorrhea
GI discomfort Reduced absorption of fat-soluble vitamins |
|
What are the arterial branches off of the celiac trunk and what branches come off of those?
|
Common hepatic artery
-Gastroduodenal artery -Right gastric artery -Proper hepatic artery Splenic artery Left gastric artery * Common hepatic -----> Gastroduodenal----> - Right gastro-omental artery -Anterior superior pancreaticoduodenal artery |
|
Familial Hypercholesterolemia
|
Type 2 A hypercholesterolemia--- accelerated atherosclerosis
Autosomal dominant Double dominant mutation—MI at age 20 |
|
What is the substrate and RLE for cholesterol synthesis? What what inhibits the RLE?
|
Substrate -- Acetyl CoA
Rate-limiting enzyme -- HMG-CoA reductase Statins inhibit HMG-CoA reductase |
|
What is the substrate and RLE for fatty acid metabolism? Where does degradation of FA occur and what is the RLE for this?
|
Substrate: Acetyl CoA
Rate-limiting enzyme: Acetly-CoA carboxylase Degradation: -Occurs in Mitochondrial maxtrix -Rate-limiting enzyme: Carnitine acyltransferase |
|
RLE: Fatty acid synthesis
KNOW*** |
Acetyl-CoA carboxylase
|
|
RLE: B-oxidation of fatty acids
KNOW*** |
Carnitine acyltransferase
|
|
RLE: Ketone synthesis
KNOW*** |
HMG-CoA synthase
|
|
RLE: Cholesterol synthesis
KNOW*** |
HMG-CoA reductase
|
|
What deficiency causes familial hypercholesterolemia?
|
Deficiency of LDL receptors
|
|
Activates LCAT
|
Apo A-1
"Put A1 steak sauce on a Cat" |
|
Mediates chylomicron secretion
|
Apo B-48
|
|
Mediates VLDL secretion
|
Apo B-100
|
|
Binds to LDL receptors
|
Apo B-100
|
|
Cofactor for lipoprotein lipase
|
C-II
|
|
Mediates uptake of remnant particles
|
Apo E
|
|
What is the rate-limiting enzyme for each of the following metabolic pathways? (HIGH YIELD)
• Hexose monophosphate pathway • Fatty acid synthesis • B-oxidation of fatty acids • Ketone body synthesis • Cholesterol synthesis |
Hexose monophosphate pathway: Glucose-6-phosphate dehydrogenase
Fatty acid synthesis: Acetyl-CoA carboxylase B-oxidation of fatty acids: Carnitine acyltransferase Ketone body synthesis: HMG-CoA synthase Cholesterol synthesis: HMG-CoA reductase |
|
Which group of medications inhibits the rate limiting enzyme of cholesterol synthesis?
|
HMG-CoA reductase inhibitors (statins)
|
|
Where in the cell would you find each of the following enzymatic processes taking place?
• Fatty acid degradation • Fatty acid synthesis •Glycolysis • TCA cycle • Electron transport chain (oxidative phosphorylation) • Gluconeogenesis |
Fatty acid degradation: Mitochondria
Fatty acid synthesis: Cytoplasm Glycolysis: Cytoplasm TCA cycle: Mitochondria Electron transport chain (oxidative phosphorylation): mitochondria Gluconeogenesis: Mitochondria and cytoplasm |
|
Lecture 63: Biochem 9
|
Amino Acids and nitrogen
|
|
A 2 year old girl has an increase in abdominal girth, failure to thrive, and skin/hair depigmentation. What is her diagnosis?
|
Kwashiorkor
*Skin/ hair depigmentation is a "big hint" |
|
What enzyme is deficient in each of the following diseases?
• Fructose intolerance • Essential fructosuria • Classic galactosemia |
Fructose intolerance: Aldolase B
Essential fructosuria: Fructokinase Classic galactosemia: Galactose-1-phosphate uridyltransferase |
|
What structures run through the cavernous sinus?
|
Oculomotor nerve (CN III)
Trochlear nerve (CN IV) Abducent nerve (CN VI) Ophthalmic division of trigeminal nerve (CN V1) Maxillary division of trigeminal nerve (CN V2) |
|
Name the Essential Amino Acids (***HIGH YIELD – 3 stars***)
|
“PVT TIM HALL”
Phenylalanine Valine Threonine Tryptophan Isoleucine Methionine Histidine Arginine Leucine Lysine |
|
Name the basic AA
|
Lysine
Arginine -Produces:Creatine, Urea, Nitric oxide Histidine |
|
Acidic AA
|
Aspartate – aspartic acid
Glutamate – glutamic acid |
|
What organ does the urea cycle take place in? What are the 2 enzymes involved and where are they found?
|
Liver
Rate-limiting enzyme: CPS-1 (carbamoyl phosphate) - Found in mitochondriaCPS-1 - Gets it's N from ammonia Ornithine transcarbamoylase - Found in the mitochondria |
|
What does Ornithine Transcarbamoylase Deficiency cause?
|
Hepatoencephalopathy
-Slurring of speech -Somnolence -Vomiting -Cerebral edema -Blurring of the vision Treatment: -Phenylbutyrate (urea cycle problem) -Benzoate -Lactulose (hyperammonemia, liver disease) |
|
Compare carbamoyl phosphate synthetase I to carbamoyl phosphate synthestase II.
|
•CPS-I
-Urea cycle -Mitochondria -Gets nitrogen from ammonium •CPS-II -Pyrimidine synthesis -Cytosol -Gets nitrogen from glutamine |
|
What is the mechanism of action of lactulose?
|
Digested by bacteria in the colon
Creates an acidic environment NH3 is converted to NH4+ which is now trapped in the lumen of the colon NH4+ excreted in the stool |
|
Lecture 64: Biochem 10
|
Amino Acid disorders
|
|
Which three enzymes are required to convert phenylalanine to DOPA?
|
Phenylalanine hydroxylase
Tyrosine hydroxylase Dihydropterin reductase |
|
What are the byproducts of MAO and COMT enzymatic activity on dopamine, Norepinephrine, and epinephrine?
|
Dopamine: HVA
Norepinephrine: VMA Epinephrine: metanephrine |
|
What substrate and cofactor is required of the generation of GABA?
|
Substrate: Glutamate
Cofactor: B6 |
|
PKU (***HIGH YIELD TOPIC – 4 stars***)
|
Deficiency of either Phenylalanine hydroxylase or a deficiency of the cofactor (Tetrahydrobiopterin) for phenylalanine hydroxylase
Patients cannot make tyrosine Phenyl Ketones -Phenylacetate -Phenyl-lactate -Phenylpyruvate Treatment: Avoid phenylalanine- Aspartame Augment: tyrosine & tetrahydrobiopterin |
|
Alkaptonuria
|
Deficient in the enzyme homogentisic acid oxidase
Autosomal recessive Ochronosis Sclera – dark brown Urine turns black when exposed to air Debilitating arthralgias (due to accumulation of homogentisic acid in the joint) |
|
Cystinuria
|
Defect of the renal proximal tubular transporter for: "COLA"
Cysteines Ornithine Lycine Arginine |
|
Hartnup Disease
|
•Tryptophan is excreted in the urine and not absorbed in the gut
Due to – an autosomal recessive defect in a transport found in the intestine and kidneys |
|
Vitamin B3 Deficiency (Pellagra)
|
The “3 Ds” of Vitamin B3 deficiency
Dermatitis Diarrhea Dementia |
|
A full term neonate becomes mentally retarded and hyperactive and has a musty odor. What is the diagnosis?
|
PKU
*Musty oder – big clue |
|
A patient with PKU should have diet low in phenylalanine. What other dietary modifications should a patient with PKU make?
|
Increasing tyrosine in the diet
Replacing tetrahydrobiopterin cofactor |
|
A middle aged man has dark spots on his sclera and has noted that his urine turns black when left sitting for a period of time. What’s the diagnosis?
|
Alkaptonuria
|
|
What is the underlying cause of maple syrup urine disease?
|
Deficiency of a-ketoacid dehydrogenase
|
|
Maple Syrup Urine Disease
|
Caused by deficiency of the enzyme a-ketoacid dehydrogenase
Lead to a buildup of the 3 branched amino acids -Isoleucine -Leucine -Valine Can cause: -Mental retardation -Death |
|
Lecture 65: Pharm Basics 7
|
Drug Metabolism
|
|
What effect does changing Km and Vmax have on potency and efficacy?
|
Km
- Lower Km → higher potency - Km is inversely related to potency - Changing Km does not affect efficacy Vmax - Higher Vmax → higher efficacy - Vmax is directly related to efficacy - Changing Vmax does not alter potency |
|
What are the 4 main pharmacokinetic equations? (KNOW)
|
Vd = (amount of drug given in IV form)/([drug] plasma)
Clearance (CL) = (0.7 x Vd)/(t1/2) Loading Dose (LD) = Css x Vd Maintenance Dose (MD) = Css x CL |
|
What enzyme is deficient in PKU? What are the symptoms?
|
Deficient enzyme: Phenylalanine hydroxylase
Symptoms: -Musty body odor -Growth retardation -Mental retardation -Seizures -Eczema -Fair skin |
|
What are the reactions that occur in Phase I metabolism? What are the properties of the metabolites?
|
Reactions: Reduction, Oxidation, Hydrolysis
Metabolites: Slightly polar, Water-soluble, Active Cytochrome P450 enzymes perform – Phase I reactions Elderly patients lose Phase I first |
|
What are the reactions that occur in Phase II metabolism? What are the properties of the metabolites?
|
Reactions: Acetylation, Methylation, Sulfation, Glucuronidation
Metabolites: Very polar, Inactive |
|
P450 Inhibitors (***HIGH YIELD***)
|
“CRACK AMIGOS”
Cimetidine Ritonavir (protease inhibitor) Amiodarone Ciprofloxacin Ketoconazole Acute alcohol use Macrolides Isoniazid Grapefruit juice Omeprazole Sulfonamides |
|
P450 Inducers (***HIGH YIELD***)
|
“Ken Rides Shotgun in Barbie’s Girl Car”
Kenytoin – Phenytoin Rides – Rifampin Shotgun – St. John’s Wort Barbie’s – Barbiturates Girl – Griseofulvin Car – Carbamazepine |
|
What enzyme does Disulfiram inhibit?
|
Acetaldehyde dehydrogenase
|
|
What enzyme does Fomepizole inhibit?
|
Alcohol dehydrogenase
|
|
What 3 drugs are know to act through Zero-order kinetics? (KNOW)
|
Phenytoin
Ethanol Aspirin Cp (plasma concentration) decreases linearly with time |
|
First-order kinetics
|
Cp decreases proportionally with time
|
|
Which hepatic phase of metabolism is lost first by geriatric patients? Which phase is mediated by cytochrome p450?
|
Lost first by geriatric patients: Phase I
Mediated by cytochrome p450: Phase I |
|
Which medication overdose can be treated with sodium bicarbonate?
|
Weak acids
|
|
Which medication overdose can be treated with ammonium chloride?
|
Weak bases
|
|
What medication inhibits alcohol dehydrogenase?
|
Fomepizole
|
|
Which medications inhibit acetaldehyde dehydrogenase?
|
Disulfiram
|
|
Is conjugation a Phase I or Phase II reaction?
|
Phase II
|
|
Which takes place first: Phase I metabolism, or Phase II?
|
Any order
|
|
In what enzyme deficiency will Heinz bodies and Bite cells be seen in?
|
Glucose 6 phosphate deficiency
*Heinz bodies-- oxidixes Hemoglobin precipitated within RBCs *Bite cells-- results from phagocytic removal of Heinz bodies by splenic macrophages "Bite into some Heinz ketchup" |
|
What is the equation for Serum- Ascites: Albumin Gradient (SAAG)
|
SAAG= [albumin] serum - [albumin] ascites
SAAG > or = 1.1 in portal hypertension SAAG < 1.1 in cancer, nephrotic syndrome, TB, pancreatitis, biliary disease, connective tissue |
|
How is Hep A transmitted, what is used to Dx it, and what are the S/S associated with it?
|
ssRNA
Transmission: fecal- oral route Dx: IgM HepA antibodies S/S: mild - Fatigue - Abdominal pain - Jaundice |
|
What is Hep A's carrier state? Does it cause chronic infection? Is there a vaccine available for it? How long is it's incubation period?
|
No carrier state
Does not cause chronic infection Vaccine is available 2 week incubation period |
|
Whats a good mnemonic to remember Hep A?
|
3 A's:
Asymptomatic (usually) Acute Alone (no carrier) |
|
How is Hep E transmitted? Does it have a carrier? Is a vaccine available for it?
|
Transmission: Fecal- oral route
No carrier No vaccine |
|
Hep E is usually very mild and treatment is only supportive. In what population can Hep E be potentially fatal?
|
Pregnant women
|
|
What are the key characteristics of Hep D?
|
Detective virus: incomplete genome of ssRNA
Can not infect unless a person already has hepatitis B Transmission: sexual, parenteral, trans-placental Severe infection |
|
What is the genome of Hep C and how is it transmitted?
|
ssRNA
Transmission: mostly parenterally, can be passed sexual and trans-placental *Hep C is the most common cause of transfusion mediated hepatitis |
|
Does Hep C cause chronic disease? Does it increase the risk for hepatocellular cancer?
|
Chronic disease will occur in 80-90%
Carrier state increases the risk for hepatocellular cancer |
|
What drugs are used to treat Hep C? Is there a vaccine available?
|
Treatment: Interferon and Ribavirin
No vaccine |
|
What is the genome of Hep B? How is it transmitted?
|
dsRNA
Transmission: mostly sexually, can be through trans-placental and parenterally |
|
Can Hep B causes a chronic infection?
|
It can, but less so than Hep C
If infected as an adult--- 10% If infected trans- placentally or also have immune deficiency--- 80% |
|
Does Hep B have a carrier state?
|
Yes
Increases risk of HCC |
|
Is there a vaccine for Hep B? How long is Hep B's incubation period?
|
Yes, one of first vaccines given to a newborn
Incubation period= 60-90 days |
|
When will HB surface antigen (HBsAg) be positive?
|
During active infection
|
|
When will you have positive HBsAb (surface antibody)
|
When you do not have active disease:
You had HepB and recovered You were immunized against HepB |
|
What does positive Hep B core antibody indicate?
|
A history of Hep B infection
Acute infection (early on) ---> +IgM Chronic infection ----> +IgG Full recover from infection ---> +IgG |
|
What does positive HB e antigen indicate?
|
Virus is actively replicating and there is a high transmissibility
|
|
What does positive HB e antibody indicate?
|
Low transmissibility
|
|
Describe Autoimmune Hepatitis Type 1 and 2
|
Type 1: ANA (+) and/ or anti- smooth muscle antibody (+)
Type 2: Liver/ kidney microsomal antibody (+) and/ or liver cytosol antigen (+) |
|
What is the pathology of Primary sclerosing cholangitis? How does it present?
|
Unknown cause of concentric "onion skin" bile duct fibrosis---> alternating strictures and dilation
Presentation: - Pruritus - Jaundice - Dark urine - Light stools - Hepatosplenomegaly |
|
What is the pathology of Primary biliary cirrhosis?
|
Autoimmune reaction---> Lymphocytic infiltrate + granulomas
*Lymphocytic infiltrate= T lymphocytes attacking the bile ductules in the liver parenchyma with granuloma formation |
|
What is the MOA of ursodiol?
|
It is a naturally occuring bile actid
Decreases synthesis of cholesterol in the liver Changes the composition of bile In PBC is delays disease progressive and enhances survival *Only approved treatment of PBC |
|
What is the pathology of secondary biliary cirrhosis?
|
Extrahepatic biliary obstruction (gallstone, biliary stricture, chronic pancreasitis, carcinoma of the pancreatic head) ---> Increases pressure in intrahepatic ducts ---> injury/ fibrosis and bile stasis
|
|
Cholelithiasis
|
Gallstones
|
|
Cholecystitis
|
Inflammation/ infection of the gallbladder
|
|
Cholangitis
|
Inflammation/ infection of the biliary tree
|
|
Choledocholithiasis
|
Gallstones in the bile ducts
|
|
What is clonorchis sinensis and what can it cause?
|
Liver fluke that infects the biliary
Can cause cholangiocarcinoma and pigemented gallstones |
|
Phenylalanine is the precursor for _______. What enzyme enzymes this reaction?
|
Phenylalanine -----> Tyrosine
via Phenylalanine hydroxylase |
|
What is cofactor is needed for phenylalanine hydroxylase?
|
Tetrahydrobiopterin
|
|
Tyrosine is converted to ______ via what enzyme?
|
Dopa
Tyrosine hydroxylase |
|
Dopa is converted to dopamine via what enzyme? What cofactor is required?
|
Dopa Decarboxylase
Vitamin B6 *Dopa decarboxylase is inhibited by Carbadopa |
|
Dopamine is converted to NE via what vitamin?
|
Vitamin C
|
|
What converts NE to Epinephrine?
|
Cortisol
|
|
Histidine is the precursor of ________
|
Histamine
|
|
Glycine is the precursor of _____ and _______
|
Porphyrin
Heme |
|
Glutamate is the precursor of __________ and_________
|
GABA
Glutathione |
|
Methionine is the precursor of _______
|
S- adenosyl- methionine (SAM)
|
|
Arginine is the precursor of________, _______, & ________
|
Creatine
Urea NO |
|
Tryptophan is the precursor of ______ and _______
|
Niacin
Serotonmin |
|
What amino acid derivatives require Vit B6?
|
Histidine ---> Histamine
Tryptophan ---> Niacin Glycine ----> Porphyrin Glutamate ----> GABA |