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75 Cards in this Set

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What 2 things are important to bear in mind about protists and their relation to eukaryotic lineages?
Protists are eukaryotes



Eukaryotic cells have organelles and are more complex than prokaryotic cells




It is important to bear in mind that


1. The organisms in most eukaryotic lineages are protists


2. Most protists are unicellular

How does the structural and functional diversity of protists compare with other groups of eukaryotes?



What type of cellular species are most protists?




How is it possible that single-celled protists can be very complex?

Protists exhibit more structural and functional diversity than any other group of eukaryotes



Though most protists are unicellular, there are some colonial and multicellular species




Single-celled protists can be very complex, as all biological functions are carried out by organelles in each individual cell

What are the 3 nutrition types of protists?
Protists, the most nutritionally diverse of all eukaryotes, include:

1. Photoautotrophs, which contain chloroplasts




2. Heterotrophs, which absorb organic molecules or ingest larger food particles




3. Mixotrophs, which combine photosynthesis and heterotrophic nutrition

How can protists reproduce? What processes are involved?
Some protists reproduce asexually, while others reproduce sexually, or by the sexual processes of meiosis and fertilization
Why are amitochondriates no longer considered the oldest lineage of eukaryotes?



One hypothesis separates eukaryotes into what divisions?

Four Supergroups of Eukaryotes

It is no longer thought that amitochondriates (lacking mitochondria) are the oldest lineage of eukaryotes




Many protists have been shown to have mitochondria and have been reclassified




Our understanding of the relationships among protist groups continues to change rapidly




One hypothesis divides all eukaryotes (including protists) into four supergroups

From where does protist diversity have its origins?



What is endosymbiosis?

There is now considerable evidence that much protist diversity has its origins in endosymbiosis



Endosymbiosis is a relationship between two species in which one organism lives inside the cell or cells of the other organism (the host)

From what are mitochondria and plastids derived from?



Mitochondria evolved once by endosymbiosis of what organism?




How did plastids evolve later on?

Mitochondria and plastids are derived from prokaryotes that were engulfed by the ancestors of early eukaryotic cells



Mitochondria evolved once by endosymbiosis of an alpha proteobacterium




Plastids evolved later by endosymbiosis of a photosynthetic cyanobacterium




The ancestral host cell may have been an archaean or a “protoeukaryote,” from a lineage related to, but diverged from archaeal ancestors

How did mitochondria first arise?



How did the plastid lineage later evolve?




The protists of the plastid-bearing lineage evolved into what?

Mitochondria arose first through descent from a bacterium that was engulfed by a cell from an archaeal lineage



The plastid lineage evolved later from a photosynthetic cyanobacterium that was engulfed by a heterotrophic eukaryote




The plastid-bearing lineage of protists evolved into photosynthetic protists, red and green algae

Illustrate the arrival of plastids, beginning with the most recent common ancestor.
Like cyanobacteria, plastids of red algae and green algae have what?



Transport proteins in the membranes of red and green algae are homologous to what?

Like cyanobacteria, plastids of red algae and green algae have two membranes



Transport proteins in the membranes of red and green algae are homologous to those found in cyanobacteria

On several occasions during eukaryotic evolution, what did red and green algae undergo, and what were they ingested by?



How did chlorarachniophytes likely evolve?


What is a nucleomorph?

On several occasions during eukaryotic evolution, red and green algae underwent secondary endosymbiosis, in which they were ingested by a heterotrophic eukaryote



For example, chlorarachniophytes likely evolved when a heterotrophic eukaryote engulfed a green alga




The engulfed cell contains a vestigial nucleus called a nucleomorph

Illustrate the basic morphology of the Chlorarachniophyte.
The clade Excavata is characterized by what?



Some members have an “excavated” what?




This group includes what three groups of organisms?

Concept 28.2: Excavates include protists with modified mitochondria and protists with unique flagella


The clade Excavata is characterized by its cytoskeleton


Some members have an “excavated” feeding groove


This group includes the diplomonads, parabasalids, and euglenozoans

Diplomonads and Parabasalids lack/possess what organelles? Where do they live?



What are mitosomes?




Where do diplomonads derive energy from?




Comment on the nuclei and flagella of diplomonads.

Diplomonads and Parabasalids


-These two groups lack plastids, have modified mitochondria, and most live in anaerobic environments




Diplomonads


-Have reduced mitochondria called mitosomes




-Derive energy from anaerobic biochemical pathways




-Have two equal-sized nuclei and multiple flagella


Are often parasites, for example, Giardia intestinalis

What are hydrogenosomes in Parabasalids?



What pathogenic Parabasalid causes yeast infections?

Parabasalids


Have reduced mitochondria called hydrogenosomes that generate some energy anaerobically




Include Trichomonas vaginalis, the pathogen that causes yeast infections in human females

What nutrional types are found in the Euglenozoa clade?



What distinguishes Euglenozoa as a clade? What else does this clade include?

Euglenozoans


Euglenozoa is a diverse clade that includes predatory heterotrophs, photosynthetic autotrophs, mixotrophs, and parasites




The main feature distinguishing them as a clade is a spiral or crystalline rod inside their flagella




This clade includes the kinetoplastids and euglenids

Describe the mitochondrion of kinetoplastids.



What do free-living species of kinetoplastids consume?




What are examples of pathogenic kinetoplastids?

Kinetoplastids


Kinetoplastids have a single mitochondrion with an organized mass of DNA called a kinetoplast




Free-living species are consumers of prokaryotes in freshwater, marine, and moist terrestrial ecosystems




Some species are parasitic




Kinetoplastids in the genus Trypanosoma cause sleeping sickness in humans




Another pathogenic trypanosome causes Chagas’ disease

How do trypanosomes evade immune responses?

Trypanosomes evade immune responses by switching surface proteins


A cell produces millions of copies of a single protein


The new generation produces millions of copies of a different protein


These frequent changes prevent the host from developing immunity

Describe Euglenids (in a nutshell)?

Euglenids


Euglenids have one or two flagella that emerge from a pocket at one end of the cell


Some species can be both autotrophic and heterotrophic

Illustrate the morphology of Euglenids.
Describe the naming of the SAR clade.

Concept 28.3: The “SAR” clade is a highly diverse group of protists defined by DNA similarities


The “SAR” clade is a diverse monophyletic supergroup named for the first letters of its three major clades stramenopiles, alveolates, and rhizarians




This group is one of the most controversial of the four supergroups

Illustrate the phylogeny of the SAR clade.
Describe Stramenopiles and their morphology.

Stramenopiles


The stramenopiles clade includes some of the most important photosynthetic organisms on Earth


Most have a “hairy” flagellum paired with a “smooth” flagellum


Stramenopiles include diatoms, golden algae, and brown algae

What are Diatoms?

Diatoms


Diatoms are unicellular algae with a unique two-part, glass-like wall of silicon dioxide

Describe Golden Algae.

Golden Algae


Golden algae are named for their color, which results from their yellow and brown carotenoids


The cells of golden algae are typically biflagellated, with both flagella near one end


All golden algae are photosynthetic, and some are mixotrophs


Most are unicellular, but some are colonial

What are Brown Algae?

Brown Algae


Brown algae are the largest and most complex algae


All are multicellular, and most are marine


Brown algae include many species commonly called “seaweeds”

Describe the habitat and morphology of different seaweeds.

Giant seaweeds called kelps live in deep parts of the ocean




Brown algal seaweeds have plantlike structures: the rootlike holdfast, which anchors the alga, and a stemlike stipe, which supports the leaflike blades




Similarities between algae and plants are examples of analogous structures

Illustrate the 3 main structural features of the Brown algal seaweeds.
Describe the idea of Alternation of Generations.

Alternation of Generations


A variety of life cycles have evolved among the multicellular algae


The most complex life cycles include an alternation of generations, the alternation of multicellular haploid and diploid forms


Heteromorphic generations are structurally different, while isomorphic generations look similar

What is the function of zoospores?

The diploid sporophyte produces haploid flagellated spores called zoospores




The zoospores develop into haploid male and female gametophytes, which produce gametes




Fertilization of gametes results in a diploid zygote, which grows into a new sporophyte

Illustrate the life cycle of zoospores, including meiosis and fertilization.
Write a few notes on the clade Alveolata.

Alveolates


Members of the clade Alveolata have membrane-enclosed sacs (alveoli) just under the plasma membrane


The alveolates include:


1. Dinoflagellates


2. Apicomplexans


3. Ciliates

Describe the morphology, habitat, and nutritional type of dinoflagellates.

Dinoflagellates


Dinoflagellates have two flagella and each cell is reinforced by cellulose plates


They are abundant components of both marine and freshwater phytoplankton


They are a diverse group of aquatic phototrophs, mixotrophs, and heterotrophs


Toxic “red tides” are caused by dinoflagellate blooms

What causes Red tide in the Gulf of Carpentaria in Northern Australia.
Describe Apicomplexans, their morphology, and their basic life cycle.

Apicomplexans


Apicomplexans are parasites of animals, and some cause serious human diseases


They spread through their host as infectious cells called sporozoites


One end, the apex, contains a complex of organelles specialized for penetrating host cells and tissues


Most have sexual and asexual stages that require two or more different host species for completion

Write a few notes on Plasmodium and the effect of malaria on humans.

The apicomplexan Plasmodium is the parasite that causes malaria


Plasmodium requires both mosquitoes and humans to complete its life cycle


Approximately 900,000 people die each year from malaria


Efforts are ongoing to develop vaccines that target this pathogen

Illustrate the life cycle of Plasmodium.
Describe the morphology and sexual characteristics of Ciliates.

Ciliates


Ciliates, a large varied group of protists, are named for their use of cilia to move and feed


They have large macronuclei and small micronuclei




Genetic variation results from conjugation, in which two individuals exchange haploid micronuclei




Conjugation is a sexual process, and is separate from reproduction, which generally occurs by binary fission

Write a few notes on Rhizarians, commenting on their unique morphology.

Rhizarians


Many species in the rhizarian clade are amoebas


Amoebas are protists that move and feed by pseudopodia, extensions of the cell surface


Rhizarian amoebas differ from amoebas in other clades by having threadlike pseudopodia


Rhizarians include radiolarians, forams, and cercozoans

Write a few notes on Radiolarians.

Radiolarians


Marine protists called radiolarians have delicate, symmetrical internal skeletons that are usually made of silica


Radiolarians use their pseudopodia to engulf microorganisms through phagocytosis


The pseudopodia of radiolarians radiate from the central body

Describe the morphology of Forams.



What does the magnesium content in fossilized forams tell us?

Forams


Foraminiferans, or forams, are named for porous, generally multichambered shells, called tests


Pseudopodia extend through the pores in the test


Many forams have endosymbiotic algae




Foram tests in marine sediments form an extensive fossil record


Researchers can use measures of the magnesium content in fossilized forams to estimate changes in ocean temperature over time

Describe the Cercozoans.

Cercozoans


Cercozoans include most amoeboid and flagellated protists with threadlike pseudopodia


They are common in marine, freshwater, and soil ecosystems


Most are heterotrophs, including parasites and predators

What is Paulinella chromatophora?

Paulinella chromatophora is an autotroph with a unique photosynthetic structure called a chromoatophore


This structure evolved from a different cyanobacterium than the plastids of other photosynthetic eukaryotes

Describe the arrival of red algae and green algae.



What supergroup includes them?

Concept 28.4: Red algae and green algae are the closest relatives of land plants


Plastids arose when a heterotrophic protist acquired a cyanobacterial endosymbiont




The photosynthetic descendants of this ancient protist evolved into red algae and green algae




Land plants are descended from the green algae




Archaeplastida is the supergroup that includes red algae, green algae, and land plants

Illustrate the divergences of red algae, green algae, and land plants.
Describe the unique characteristics of red algae.

Red Algae


Red algae are reddish in color due to an accessory pigment called phycoerythrin, which masks the green of chlorophyll


The color varies from greenish-red in shallow water to dark red or almost black in deep water


Red algae are usually multicellular; the largest are seaweeds


Red algae are the most abundant large algae in coastal waters of the tropics

Give three examples of red algae.
What are green algae?

Green Algae


Green algae are named for their grass-green chloroplasts


Plants are descended from the green algae


Green algae are a paraphyletic group


The two main groups are the charophytes and the chlorophytes


Charophytes are most closely related to land plants

Describe the increasing complexity of chlorophytes.

Larger size and greater complexity evolved in chlorophytes by


The formation of colonies from individual cells


The formation of true multicellular bodies by cell division and differentiation (e.g., Ulva)


The repeated division of nuclei with no cytoplasmic division (e.g., Caulerpa)

Give two examples of Green Algae
What type of life cycles do most chlorophytes possess?
Most chlorophytes have complex life cycles with both sexual and asexual reproductive stages
Illustrate the complex life cycle of the Chlorophyte, with both sexual and asexual reproductive stages.
Describe the supergroup Unikonta and what it includes.

Concept 28.5: Unikonts include protists that are closely related to fungi and animals


The supergroup Unikonta includes animals, fungi, and some protists


This group includes two clades: the amoebozoans and the opisthokonts (animals, fungi, and related protists)


The root of the eukaryotic tree remains controversial


It is unclear whether unikonts separated from other eukaryotes relatively early or late

Illustrate the questionable phylogeny of Unikonta.
What characterizes ameobozoans?

Amoebozoans


Amoebozoans are amoeba that have lobe- or tube-shaped, rather than threadlike, pseudopodia




They include slime molds, tubulinids, and entamoebas

What characterizes slime molds?

Slime Molds


Slime molds, or mycetozoans, were once thought to be fungi




DNA sequence analyses indicate that the resemblance between slime molds and fungi is a result of convergent evolution




Slime molds include two lineages, plasmodial slime molds and cellular slime molds

Describe the coloration of Plasmodial slime molds.

Plasmodial Slime Molds


Many species of plasmodial slime molds are brightly pigmented, usually yellow or orange

Illustrate the life cycle of Plasmodial slime molds.
Describe the formation of the plasmoidum mass in the plasmodial slime molds' life cycle.

At one point in the life cycle, plasmodial slime molds form a mass called a plasmodium (not to be confused with malarial Plasmodium)




The plasmodium is not multicellular


It is undivided by plasma membranes and contains many diploid nuclei




It extends pseudopodia through decomposing material, engulfing food by phagocytosis

What characterizes cellular slime molds?

Cellular Slime Molds


Cellular slime molds form multicellular aggregates in which cells are separated by their membranes




Cells feed individually but can aggregate to migrate and form a fruiting body


Dictyostelium discoideum is an experimental model for studying the evolution of multicellularity

Illustrate the life cycle of cellular slime molds.
What characterizes Tubulinids?

Tubulinids


Tubulinids are a diverse group of amoebozoans with lobe- or tube-shaped pseudopodia


They are common unicellular protists in soil as well as freshwater and marine environments


Most tubulinids are heterotrophic and actively seek and consume bacteria and other protists

What characterizes Entamoebas?

Entamoebas


Entamoebas are parasites of vertebrates and some invertebrates


Entamoeba histolytica causes amebic dysentery, the third-leading cause of human death due to eukaryotic parasites

What characterizes Opisthokonts?

Opisthokonts


Opisthokonts include animals, fungi, and several groups of protists

Where are protists found and what roles do they play in their habitats?

Concept 28.6: Protists play key roles in ecological communities


Protists are found in diverse aquatic and moist terrestrial environments


Protists play two key roles in their habitats: that of symbiont and that of producer

What characterizes Symbiotic protists?

Symbiotic Protists


Some protist symbionts benefit their hosts


Dinoflagellates nourish coral polyps that build reefs


Wood-digesting protists inhabit the gut of termites

Describe examples of parasitic protists.

Some protists are parasitic


Plasmodium causes malaria


Pfiesteria shumwayae is a dinoflagellate that causes fish kills


Phytophthora ramorum causes sudden oak death


P. infestans causes potato late blight, which contributed to the Irish famine of the 19th century

What characterizes photosynthetic protists?

Photosynthetic Protists


Many protists are important producers that obtain energy from the sun




In aquatic environments, photosynthetic protists and prokaryotes are the main producers




In aquatic environments, photosynthetic protists are limited by nutrients




These populations can explode when limiting nutrients are added

What kind of effect has sea surface temperature had on photosynthetic protist biomass?

Biomass of photosynthetic protists has declined as sea surface temperature has increased


Growth of phytoplankton communities relies on nutrients delivered from the ocean bottom through the process of upwelling


Warm surface water acts as a barrier to upwelling

What three things could continued warming of sea surface temperature have large effects on?

If sea surface temperature continues to warm due to global warming, this could have large effects on:




1. Marine ecosystems


2. Fishery yields


3. The global carbon cycle

Illustrate basic sea surface temperatures across the globe.
What characterizes the classification of protists?

Living Small


Even a low-power microscope can reveal a great variety of organisms in a drop of pond water




Protist is the informal name of the group of mostly unicellular eukaryotes




Advances in eukaryotic systematics have caused the classification of protists to change significantly




Protists constitute a polyphyletic group, and Protista is no longer valid as a kingdom

Illustrate a phylogeny, beginning with the last common ancestor of Excavata, SAR clade, Archaeplastida, and Unikonta.
Illustrate the general divergence of Excavata.
What are the 5 domains of life?



Where did they diverge from?