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48 Cards in this Set

  • Front
  • Back

Four bases of DNA

Adenine


Guanine


Cytosine


Thymine

Experiments on virulence in mice done by... on...

Griffith, streptococcus pneumoniae

Explain Griffiths experiment

S and R strains and virulence. Concluded that some substance from the capsule and virulence must have passed from s to r strain, causing it to transform. Phenotype changed genotype.

Three requirements of genetic material

1. Store information on development, structure, metabolism.


2. Stable enough to be transferred to the next generation.


3. Undergo rare changes/mutations for genetic variation.

Avery's experiments

Similar to Griffith with Protease to kill protein and DNAase to kill DNA. Protease had no effects on R strain, meaning DNA was the transforming substance.

Tagging material from jellyfish

Green Flourescent Protein GFP.

Purine

A, G

Pyrimidine

T, C

Hershey & Chase experiments

Tagged protein coats or DNA of bacteriophage that infects bacteria. Determined that virus releases DNA to take over, meaning it contained genetic information.

Chargraff's Rule

1. Amount of A, T, C,G is constant in the same species.


2. Each species has the same amount of A=T and C=G

Rosalind Franklin

X ray diffration studies DNA structure. Viscous solution of DNA is centrifuged, it can be separated into fibres. They can produce a pattern. Evidenced: DNA helix, and some portion of helix is repeated.

Watson and Crick Model

Deduced DNA is double helix with sugar phosphate backbone and paired bases on the inside. Hydrogen bonded bases as rungs. They it mathematical measurements of X ray diffraction. Agreed with Chargraff's complementary base pairing. Pyramidine bonds to purine.

End of 3' end

OH

End of 5' end

P

Replication occurs from whch side?

5' to 3'

DNA replication

Process of copying a DNA molecule

Semiconservative Replication

Each strand of the original DNA parental molecule serves as a template or model for a new strand in a daughter molecule.

DNA replication steps

1. Unwinding


2. Complementary base pairing


3. Joining

Melso and Stahl demonstrate semiconservative replication

They placed DNA in heavy nitrogen medium so all would contain it. Then into a light nitrogen. When tested after first replication, DNA were medium weight. After the second, half were light, the other were medium.

Prokaryotic Replication

Single circular loop of DNA. Moves 5' - 3'. Two identical circles. Takes 40 minutes, but done every 20.

Eukaryotic Replication terminology

Replication fork where two strands split. Replication bubble, where there are two strands forming.

Beadle and Tatum

On fungus to propose one-gene-one-enzyme theory.

Process of Replication (on the DNA)

Helicase unwinds DNA. DNA polymerase gathers nucleotides and joins them. Lagging strand is 3' to 5' so:


RNA primer lays down a short RNA. Binding proteins stabilise new strand. Creates Okazaki fragments. DNA polymerase removes RNA primer U with T. DNA ligase joins the fragments.

RNA vs DNA

Single strand


Sugar ribose instead of deoxyribose.


Uracil instead of Thymine.

mRNA function

Takes a message from DNA in the nucleus to ribosome in the cytoplasm.

rRNA

Makes up ribosomes, reads the message in RNA.

tRNA

Transfers appropriate amino acids to the ribosomes for protein synthesis.

Why replication has few mutations.

1 mistake per 100 000. DNA polymerase will id and fix, making mistakes every 1 in 1 billion (proofreading). DNA repair enzymes try to fix damage, especially by environmental issues.

Properties of the genetic code

Universal, Degenerate, Unambiguous, contain stop and start signals.

When gene transcripts, result is?

pre-mRNA.

Modifications to mRNA

Cap on 5' end (modified G molecule), Poly-A tail on 3', introns spliced.

RNA splicing

Introns spliced by splicosomes, remaining exons spliced back together.

Prokaryotic Splicing

Introns are self-spliced enzymatically.

Functions of Introns

As organismal complexity increases, introns increase.




Might combine in many combinations.


Introns regulate gene expression.


May encourage cross-over.

tRNA has two binding sites

One associates with mRNA, the other with a specific amino acid.

Differences in tRNA

One end bears a specific triplet called anticodon.


Other end binds with amino acid.


tRNA synthases attach amino acid to tRNA.

rRNA

Produced from DNA template in the nucleolus.Combined into large and small subunits.

Three binding sites

E for exit


P for peptide


A for amino acid

Components necessary for initiation

Small ribosomal subunit


Large ribosomal subunit


Initiator tRNA


mRNA transcript


Initiation factors (protein to bring these together)

Initiator tRNA

Always had UAC, carries methionine, bind to P site.

Elongation

Growth of the polypeptide

Termination

Previous tRNA moves to P site. STOP codon is UAA, UAG, UGA. No amino acids.

Release factor

Binds to the stop codon and cleaves polypeptide from the last tRNA.

What made Gerrod think there were inborn errors in metabolism?

Family members often had the same disorder, said it could be caused by the lack of an enzyme in the metabolic pathway. Hypothesised link between genes and proteins.

Haemoglobin deficiency

Difference in charge between sickle and normal cells. Thus leads to change in protein structure. Normal has negative charged glutamate, sickle cell has neural valine. Less soluble so it precipitates.

Explain triplets being Degenerate

Most have more than one codon, protecting against mutations

Explain triplets being unambiguous

Each triplet has only one codon

Describing translation

1. Initiation, elongation, termination.