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54 Cards in this Set

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polypeptides

long chain of amino acids

peptides

short chains of amino acids

amino acids

molecules small enough to enter the bloodstream at the small intestine

Transcription

synthesis of of RNA molecuke that is complementary to one strand of the DNA double helix for a particular gene

Translation

uses the information in the RNA to manufacture a protein by aligning and joining specified amino acids

S phase

phase where DNA replicates

M phase

phase where no transcription and translation occur

Central Dogma

relationship between nucleic acids and protein as a directional flow of information


(DNA to RNA to protein)

central carbon


amino group (NH²)


acid group (COOH)


hydrogen atom


"R" group

framework of amino acids

template strand

an RNA complemetary strand of the double helix

RNA polymerase

an enzyme that builds RNA molecule

coding strand

the nontemplate strand of the DNA double helix

conformation

three dimensional shape that arises from complementary base pairing within the same RNA molecule

messenger RNA (mRNA)

- carries the information that specifies a particular protein


- encodes amino acid sequence

codon

set of three consecutive mRNA bases as a genetic code word that specifies a certain amino acid

transcripts

certain mRNA molecules to produce certain subsets of genes and express specialized functions

ribosomal RNA (rRNA)

associates with proteins to form ribosomes, which structurally support and catalyze protein synthesis

ribosome

assembles and link amino acids to form proteins

ribozyme

catalyze the formation of the peptide bonds between amino acids

transfer (tRNA)

- transports specific amino acids to the ribosome for protein synthesis


- binds an mRNA codon and a specific amino acid

cloverleaf shape

anticodon

3 bases complementary to an mRNA codon

transcription factors

- forming an apparatus that binds DNA at certain sequences and initiates transcription at specific sites on chromosomes


- to prevent chaos amd form basis for transcription


- connects genome amd environment

binding domains

guide synthesis to the genes they control

CRISPR-cas9 and zinc finger nucleases

genome editing technologies that harness binding domains

transcription initiation

when transcription factors and RNA polymerase attached to a promoter

promoter

a special sequence that signals the start of the gene

TATA binding protein

first transcription factor to bind


attracted to TATA box

transcription elongation

enzymes unwind the DNA double helix locally and free RNA nucleotides bond with exposed complementary bases on the DNA temolate strand

terminator sequence

when the DNA indicates where the gene's RNA-encoding region ends

20 bases per second

typical rate of transcription in humans

10 minutes

mRNA degraded every ___

cap

- a short sequence of modified nucleotides added to the 5'end of the molecule


- contains a backwardly inserted guanine (G) with methyl groups (CH³)

methylated cap

a recognition site for protein synthesis

poly A tail

- necessary for protein synthesis to begin and may also stabilize the mRNA


- 200 adenines added by special polymerase to 3' end

introns (intervening sequences)

removed from pre-mRNA

exons

parts of mRNA that remain and are translated into amino acid sequences

pre-mRNA

term use to call mRNA prior to intron removal

small nuclear ribonucleoproteins (snRNPs) or snurps

proteins associated with the self removal of introns

spliceosome

4 snurps that cuts introns out and attaches exons to form the mature mRNA

3,365 bases

average intron size

145 bases

average exon long

isoforms

different versions of the protein product because of combinations

alternate splicing

mechanism of combining exons of a gene in different ways

genetic code

correspondence between the chemical languages of mRNA and protein

• free ribosomes in the cytoplasm


• ribosomes in endoplasmic reticulum (ER)

where translation takes place

1. triplet


2. does not overlap


3. includes controls


4. same in all species

requirements for a genetic code

AUG

start codon

UAG, UGA, UAA

stop codon

open reading frame

a sequence that does not include a stop codon

leader sequence

short sequence of bases at the start of each mRNA that enables it to form hydrogen bonds with rRNA in a ribosome

synonymous codons

different codons that specify the same amino acid

• few codons in mitochondria


• single-celled eukaryotes (ciliated protozoa)

exceptions to the universality of the genetic code

wobble

it can bind to more than one type of base synonymous codons

nonsynonymous codons

encode different amino acids