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46 Cards in this Set

  • Front
  • Back

Microorganisms




- Bacteria


- Fungi


- Protists


- Microscopic Algae


- Viruses

Living things too small to be seen by the naked eye




5 Types

Pathogenic

Disease Producing

Bacteria

- Unicellular Prokaryotes but may form groups


- Cell Wall: Peptidoglycan


- Binary fission


- Nutritionally diverse

Archaea

- Unicellular prokaryotes


- Cell walls lack peptidoglycan


- Extremophiles - Often found in extreme environments


Ex: Methanogens, halophiles, thermophiles


- Not known to cause human disease




- Organize DNA differently than bacteria and cell walls and membranes are more chemically similar to eukarya

Extremophiles

Methanogens
Halophiles
Thermophiles

- Often found in extreme environments




Ex:


- Produce methane gas


- Live in extremely salty environments (Dead Sea, Great Salt Lake)


- Live in hot sulfurous water (Hot Springs)




(4 Terms)

Protozoa

- Unicellular eukaryotes


- Sexual/asexual reproduction


- Shape variety, move with pseudopods, flagella or cilia


- Some are photosynthetic


- Live as free entities or parasites

Fungi

- Uni- or multicellular eukaryotes


- Cell wall: Chitin


- Sexual/asexual reproduction


- Absorb nutrition from environment


- Ex: Yeasts and molds

Parasites

Organisms that derive nutrition from their hosts

Algae

- Multicellular eukaryotes


- Cell wall: May contain Cellulose


- Sexual/asexual reproduction


- Wide variety of shapes


- Don't confuse with plantae

Viruses

- Acellular


- Only visible with electron microscope


- Protein coat with DNA/RNA core


- Can only reproduce using cellular machinery of others


- Living when inside host, non-living outside host

Parasites

- Multicellular eukaryotes


- Not necessarily microorganisms


- Diagnosed with tests similar to bacteria


- Ex: Helminths - Flatworms, roundworms

Cell theory: all living things are composed of cells




By Robert Hooke

- Observed wooden slice of cork under microscope and determined that life's smallest structural units were "little boxes" - cells




This led to which theory? By who?

Anton van Leewenhoek

- Considered grandfather of biology for developing better lenses and observed what he described as animalcules

Spontaneous Generation


Jar Experiment

Francesco Redi Set out to disprove ______ ________ (maggots generated from dead bodies, fungus generated from spoiled food)




With what experiment?

Vital Growth by John Needham




Lazzaro Spallanzani

Disputed between 2 scientists




- One heated chicken broth and still had microbial growth, believed that there was a '________ _________' which could be destroyed by heating


- The other suggested microbes in the air lead to the growth and heated nutritional broth in sealed flasks with no growth

Rudolf Virchow


Biogenesis

- Scientist who developed the concept of ____________, that living cells only arise from preexisting cells

Louis Pasteur Flasks experiments

- Provided basis of aseptic techniques, procedures that prevented contamination from unwanted microbes




What were these experiments called?

Fermentation

Using yeasts to convert sugars into alcohols in the absence of air

Pasteurization

Using heat to kill most of the microbes present to prevent spoilage

Germ Theory of Disease

Microorganisms Cause disease (Theory)

Vaccination

- Cowpox was an assumed _________________ of smallpox


- Jenner assumed this because he did not contract smallpox while working with cows

Chemotherapy

- Treatment or cure of disease using chemical substances

Antibiotics

Chemicals naturally produced by bacteria and fungi to act against other microorganisms

Synthetic Drugs


Chemotherapeutic agents made in laboratories


Bacteriology


Mycology


Parasitology


Immunology


Virology

Name the terms for:




- Study of bacteria


- Fungus


- Parasites, including helminths


- Immunity


- Viruses




Genomics allowed for further and more accurate classification than previously used visual techniques

16S RNA gene

- A prokaryotic rRNA gene with a name referring to its size


- Contains conserved and variable regions


- Conserved regions are almost identical


- Variable regions that change very slowly, allow easy sequencing


- Primers are like conserved regions which the DNA polymerase actually attaches which can be amplifed with PCRs to replicate the gene

Recombinant DNA

DNA from 1 or 2 more sources




Requires plasmids and 2 enzymes, the restriction enzyme and DNA ligase

Plasmid

- Small accessory circles of DNA found in bacteria


- Not part of main chromosome and replicates on its own


- Has antibiotic resistance and immunity kind of function


- Common vectors used in biotechnology

Restriction Enzyme

- Cuts viral DNA sequences found in bacterial cells into "sticky ends" where other DNA duplex plasmids can be inserted


- DNA ligase then seals the DNA


- Needed for recombinant DNA

Human proteins from bacteria

- For bacteria to express a human gene, a cloned gene has to be accompanied by regulatory regions unique to bacteria


- Gene can't have any introns


- Reverse transcriptase makes DNA copy of mRNA


- Resulting complementary DNA (cDNA) does not have introns


- Bacteria can transcribe and translate cloned cDNA to produce _________ ___________

Reverse Transcriptase

- Enzymes that can make DNA copy of mRNA called cDNA that doesn't have any introns in order to make human proteins

Microbial Ecology

- Study of the relationship between microorganisms and their environment


- Element cycle: CNOPS


- Only organisms that can 'fix nitrogen' out of atmosphere

Sewage Treatment

- Primary step involves wastewater pushed through coarse debris screen to remove sand/grit, microbes digest sludge


- Secondary step involves aeration, clarification, disinfection with chlorine or UV


- Tertiary step involves nutrient removal

Bioremediation

- Using bacteria to clean up toxins and pollution

Insect Control

- Ex: Baccillus thuringiensis - Produces protein crystals toxic to digestive systems of insects


- Nowadays pesticides

Comparitive Genomics

Evaluation of similarities and differences between genomes of different organisms; can reveal differences between individuals and species as well as evolutionary relationships

Phylogenetic Tree of Life

- Suggests that domain bacteria and archaea may have evolved from first common ancestor


- Believed domain Eukarya split from Archaea

10




100

There are ____ x more bacterial cells on and in your body than human cells




For every human cell, there are ___ bacteria.

1. All organisms are composed of cells


2. Cells are the basic units of structure and function in organisms


3. Cells only come from preexisting cells because cells are self-reproducing


Cell Theory



(3 Ideas)

Smaller surface area allows better molecule and nutrient exchange for volume of cell

Why is a cell so small? (1 micrometer)

Prokaryotes

- No membrane bound nucleus


- Nucleoid (DNA bundle)


- Circular DNA


- Cell membrane, cytoplasm, ribosomes



Bacteria

- Structurally simple, metabolically diverse
- Most abundant and diverse group of organisms
- 3 main shapes: spirillum/spirochete, baccilus, coccus

Prokaryotes Cell Envelope

- Includes plasma membrane, cell wall and glycocalyx (polysaccharide layer outside cell wall that prevents drying out; helps avoid host's immune system in pathogens - disease causing bacteria)


- Glycocalyx layer called capsule if compact, slime layer if diffuse


- Plasma membrane can form internal pouches called mesosomes which increase surface area


- Cell wall maintains shape and resists osmotic pressure - made of peptidoglycan

Inclusion Body

- Prokaryotic organelle that stores nutrients for later use

Flagella - Propels bacteria through water


Fimbriae - Bristle like fibers that aid in attachment


Conjugation Pili - Pass DNA between bacteria

3 Type of Prokaryotic appendages and Function

Mesosome

Internal pouches formed from the plasma membrane on prokaryotes that increase surface area