Use LEFT and RIGHT arrow keys to navigate between flashcards;
Use UP and DOWN arrow keys to flip the card;
H to show hint;
A reads text to speech;
200 Cards in this Set
- Front
- Back
how is gram stain performed
|
1) apply crystal violet to smear, wash (G-,+)
2) apply Gram's iodine 3) add ethyl alochol 95%, wash (G-) 4) counterstain with safranin, wash (G-) examine by oil immersion |
|
why do you we add 95% ethyl acohol
|
for decolorization of gram negative
|
|
mechanism of gram stain
|
G+ve bact appear violet as
CW + CV + iodine --> insoluble complex in EA G-ve appear red as this complex is soluble |
|
negative staining?
|
india ink (cap) and negrosin
|
|
STAPHYLOCOCCUS
classify? |
coagulase +ve: st. aureus
coagulase -ve: St.E and St.S |
|
STAPHYLOCOCCUS
classify according to endopigments |
st. Aureus: golden yellow
St. E : white St. S: lemon yellow |
|
STAPHYLOCOCCUS
diseases? |
1: PYOGENIC infections
(focal as breast abscess, disseminated as osteomyelitis and meningitis) 2. TOXIN MEDIATED Food poisoning, toxic shock and scalded |
|
STAPHYLOCOCCUS
3 toxins? |
heamolysin
leucocidins enterotoxin |
|
STAPHYLOCOCCUS
3 enzymes? |
coagulase
staphylokinase penicillinase |
|
STAPHYLOCOCCUS
selective media? |
mannitol salt agar (NaCl 10-15%)
|
|
STAPHYLOCOCCUS
what is MRSA |
St.A resistant to B lactams, aminoglycosides and sensitive to vancomycin
|
|
STAPHYLOCOCCUS
How to trace the source of infection/typing method? |
1- phage typing
2- antibiotic sensitivity |
|
STAPHYLOCOCCUS
normal carriage site of this organism? |
nose and skin
|
|
STAPHYLOCOCCUS
mention 2 non pathogenic strains and how do u differentiate between it and the pathogenic strain? |
1- St.E: (peritonitis, septicemia and neonatal meningitis)
2- St.S (UTI in women) Novobiocin: St.E sensitive DD: path c+ve, MF, LG and BH |
|
STAPHYLOCOCCUS
antigenic structures? |
TA, protein A, coagulase, +-capsule
|
|
STAPHYLOCOCCUS
specimen in TSS |
wound swab but not blood
(blood +ve in strept) |
|
STAPHYLOCOCCUS
mention 3 antibiotics NOT used in treatment |
penicillin
ampicillin cephalosporins |
|
STAPHYLOCOCCUS
virulence factors |
structural: peptidoglycan layer, protein a, +- capsule)
products (toxins and enzymes) |
|
STAPHYLOCOCCUS
coagulase test ? |
st. a produces coagulase which binds to prothrombin forming a complex that initiates polymerization of fibrin
|
|
STAPHYLOCOCCUS
types of coagulase tests |
1. slide (clumping test)
2. tube (standard coagulase test) |
|
STAPHYLOCOCCUS
how is the slide/clumping test performed? |
place two loopfuls of saline on a slide
emulsify part of a colony in each add a loopful of plasma to ONE (other=control) --> clumping (after shaking for one min) 5% false |
|
STAPHYLOCOCCUS
how is the standards coagulase test performed? |
- place half mil of dil. oxalated plasma in two tubes.
- add 5 drops of overnight broth culture of the strain in ONE tube - incubate at 37* and read hourly up to six hours. (if no clot, leave at rm temp overnight) clot appears = positive (positive, neg strain, dil plasma must be included as controls) |
|
STREPTOCOCCI
base of lancefield classification |
C antigen (by latex agglutination or ELISA)
|
|
STREPTOCOCCI
classification according to hemolytic properties on blood agar |
B : str. pyogenes
A : str pneumoniae non : ???? WHAT? |
|
STREPTOCOCCI
classify according to serological grouping (lancefield) |
A: str pyogenes
B: str agalactiae |
|
STREPTOCOCCI
classify according to biochemical properties? |
umm?
|
|
STREPTOCOCCI
diseases |
tonsilitis, scarlet fever
post str. infection: rh. fever and nephritis |
|
STREPTOCOCCI
toxins |
hemolysins (streptolysin O and S)
streptococcal pyrogenic exotoxins |
|
STREPTOCOCCI
DD between O and S streptolysins |
O -> oxygen labile
S -> non antigenic and oxygen stable |
|
STREPTOCOCCI
enzymes? |
streptokinase
hyalurinidase |
|
STREPTOCOCCI
pyogenes classified into types according to |
M and T antigen (M --> 80 types)
|
|
STREPTOCOCCI
diseases produced by Str viridans |
Dental sepsis, dental caries, bact endocarditis
|
|
STREPTOCOCCI
diseases produced by str agalactia |
neonatal sepsis and meningitis
|
|
STREPTOCOCCI
organism with similar morphology and can resist heat |
Enterococcus faecalis
|
|
STREPTOCOCCI
organism with similar morphology and can grow on Na? |
enterococcus faecalis
|
|
STREPTOCOCCI
antigenic structures of the str. pyogenes capsule? |
C ag, proteins MTR
|
|
STREPTOCOCCI
test used in diagnosis of rh fever? |
ASOT (antistreptolysin O titer)
if >200 ... +ve |
|
PNEUMOCOCCI
diseases |
lobar pneumonia
bronchopneumonia (complications eg pleurisy, empyema, meningitis, arthritis, sinusitis, brain abscess) |
|
PNEUMOCOCCI
DD with other organisms (viridans) |
1. optochin sensitivity
2. bile solubility 3. inulin fermentation 4. virulence in mice PNEUMOCOCCI +ve for ALL viridans negative for all |
|
PNEUMOCOCCI
typing ? |
by PLS C ag
by capsule swelling test (quellung test) |
|
PNEUMOCOCCI
prophylaxis |
polyvalent vaccine
|
|
PNEUMOCOCCI
species of viridans |
salivarius, mitis, mutans
|
|
PNEUMOCOCCI
ttt? |
penicillin
if resistant -> vancomycin |
|
DIPHTHEROIDS
method used to demonstrate granules |
Neissers stain
|
|
DIPHTHEROIDS
Toxigenicity tests |
1- elecks
2- PCR 3- ELISA |
|
DIPHTHEROIDS
selective and enriched media? |
mcleods (K tellurite) and Lofflers serum
|
|
DIPHTHEROIDS
prophylaxis? |
1- active immunization by alum ppt toxoid DPT or DT
2- close contacts (AB penicillin or erythromycin) + one dose of DPT or DT >12 M |
|
DIPHTHEROIDS
causes of pseudomembrane in throat |
diptheria, str pyogenes, v ang(???) and Clostridium
|
|
DIPHTHEROIDS
why would this organism become toxic |
lysogenic conversion
|
|
DIPHTHEROIDS
toxin has a special affinity for |
heart muscles
nerve cells and adrenal cells while org. prefers throat, conj, wound and vulva |
|
DIPHTHEROIDS
how do you test for susceptibility for this organism? |
schick test
|
|
DIPHTHEROIDS
ttt |
big dose of antitoxins (h test) and penicillin
|
|
DIPHTHEROIDS
dd of this organism and listeria? |
by motility
listeria motile |
|
NESSEIRIA
(smear stains by G and MB. N G film from culture) identify |
NAME
SMEAR OR FILM from culture NAME OF STAIN |
|
NEISSERIA
selective media? |
thayer martin (chocolate + VCN)
|
|
NEISSERIA
mention ab used for its isolation or ab not used in ttt |
VCN
|
|
NEISSERIA
dd between path and non path strains |
NON PATH
- grow on nutrient agar - dont need excess co2 - can grow at room temp - colonies are more opaque - diff fermentation reactions |
|
NEISSERIA
2 pathogens |
neisseria gonorrhea
neisseria meningitidis |
|
NEISSERIA
2 diseases |
gonorrhea and meningitis
|
|
NEISSERIA
enumerate org diagnosed by smear |
N, V ang, cand
|
|
NEISSERIA
why do we culture in acute stage of this disease? |
confirmation
Ab sensitivity if there is a medicolegal problem |
|
NEISSERIA
drug used for carrier and close contacts of this disease |
rifampicin
|
|
NEISSERIA
specimen in carrier |
nasoph swab by wests swab
|
|
NEISSERIA
mention the decolorizing agent in this stain |
Ethyl acohol 95%
|
|
NEISSERIA
mention 2 genera with the same morph |
N. and Moraxella
|
|
NEISSERIA
virulence factors |
pili, outer membrane proteins, endotoxin(lps), IgA protease
|
|
SPORE BEARER BACILLI ...
|
with G stain, MZN or NF stain
mzn -> decolorizing agent: sulphuric acid 0.25 - 0.5% |
|
SPORE BEARER BACILLI
classification |
1- aerobic such as
B. anthracis and B cereus (dd by animal path) 2- anaerobic such as Cl tetani, Cl causing GG, Cl botulinum, Cl difficile |
|
SPORE BEARER BACILLI
diseases |
anthrax, tetanus, GG, botulism
|
|
SPORE BEARER BACILLI
other spore stains? |
other two
|
|
SPORE BEARER BACILLI
mention 3 org with this morphology and produce food poisoning |
B CEREUS
Cl Botulinum Cl Perfringens (type a) |
|
SPORE BEARER BACILLI
mention the organism with this morphology used in biological warfare |
B Antrhacis
|
|
SPORE BEARER BACILLI
2 examples of zoonosis |
anthrax and listeria
|
|
SPORE BEARER BACILLI
vaccine and ttt of anthrax |
alum ppt toxoid and Penicillin
ciprofoxacin for bioterrorism |
|
SPORE BEARER BACILLI
mech of action of Cl T toxin |
inhibits the release of inhibitory mediators (Glycine and GABA) while
Cl B inhibits the release of Acetyl choline |
|
SPORE BEARER BACILLI
virulence factors of Clostridium perfringens |
capsule, toxins (alpha and entero)
enzymes (Hyaluronidase, collagenase, DNase) |
|
What is the best specimen in meningitis?
|
CSF
blood aspiration from skin lesion |
|
What is the best specimen in pneumonia?
|
sputum
|
|
What is the best specimen in endocarditis?
|
blood
|
|
What is the best specimen in tonsilitis?
|
throat swab
|
|
What is the best specimen in otitis media?
|
pus
|
|
What is the best specimen in food poisoning?
|
Food, vomit, stool
|
|
What is the best specimen in gonorrhea
|
acute: urethral discharge of both sexes
chronic: male - morning drop or prostatic massage female: cervical swab |
|
peptone water, nutrient broth
uses |
1. base for other media
2. growth of non fastidious organism |
|
soft agar uses?
|
motility test
preservation of org |
|
soft agar
conc of agar in media |
0.7%
(any other agar 2%) |
|
deep agar uses
|
1- growth of anaerobic bact
2- test of o2 req of bact: * st aerobic -> grow at surface only st. anaerobic -> grow away from surface facultative anaerobic -> grow all over microaeroph -> just below the surface |
|
nutrient agar plate or slope (to increase surface area of slope)
uses |
as broth
(3 org not gr: str, path N, C.D.) |
|
blood agar
preparation |
agar 2% is first sterilized in autoclave then we add blood (normally sterile)
at 50* c (blood conc = 5-10%) |
|
blood agar uses
|
1- growth of fastidious organism (str)
2- detection of hemolytic activity (alpha such as str v, beta such as staph aureus and str pyogenes) |
|
chocolate blood agar (lysed blood agar)
prep |
as blood agar then we increase temp to 80* for 10 min
|
|
uses of chocolate agar
|
growth of F org as path. N and haemophilus
|
|
macconkeys agar
selective or inhibitory agent? |
sodium taurocholate
|
|
macconkeys agar
selective for? |
gram negative bacilli (inhibits gram positive)
|
|
macconkeys agar
sugar? indicator? |
lactose
neutral red |
|
macconkeys agar
use? |
DD of intestinal org into LF (pink colony eg e coli) and NLF (pale yellow colonies eg salmonella and shigella)
|
|
egg saline
solidifying agent? |
egg
|
|
egg saline
how do you solidify this media? |
inspissation
|
|
egg saline structure?
|
egg yolk and saline (2.5:1)
|
|
egg saline screw capped to?
|
prevent dryness
|
|
egg saline uses?
|
enriched media for culture of mycobact tb
|
|
lofflers serum
solidifying agent? |
seruum
|
|
lofflers serum
structure |
serum + glucose broth (3:1)
|
|
lofflers serum
uses? |
enriched media for culture and typical morphology of C diptheria
|
|
sugar media (comment on result)
|
no fermentation: CT
F with acid: NM , NG F with AG: EF and CL P |
|
sugar media
base |
peptone water
|
|
sugar media sugar percent
|
1%
|
|
sugar media
mention the indicator |
phenol red
|
|
sugar media
importance of durhams tube |
to trap gas
|
|
TCBS (thisulphate citrate bile salt)
ph? |
8-8.6
|
|
TCBS
sugar? |
sucrose
|
|
TCBS
indicator? |
bromothymol blue
|
|
TCBS
selective agent? |
TCB
thiosulphate citrate bile |
|
TCBS
uses |
selective media for Vibrio cholerae
|
|
TCBS
mention 2 org grow on this media |
v ch(yellow) and v parahemolyticus(blue)
|
|
LJ M (beaten eggs + mineral salts + malachite green)
selective media for? |
mycobact (2-8 w)
|
|
LJM selective agents?
|
malachite green and glycerol or pyruvate
|
|
cooked meat broth ..
|
strict anaerobic media as meat contains reducing sub (blood pigments of meat and unsaturated fatty acids)
|
|
cooked meat broth for culture of?
|
strict anaerobic org such as CL (T, B, GG) and peptostreptococci
|
|
cooked meat
other anaerobic media? |
thyoglycolate broth
|
|
selenite f broth
favors growth of? |
Salmonella TYPHI and parathypi
but disfavors growth of E coli |
|
blood culture bottle
how do u take a specimen |
vein puncture after skin dis by 2% tr iodine or betadine
(broth + 0.05% sodium sulphonate (anticoag)) |
|
blood culture bottle
mention 3 org grow on it |
str pn
str v NM |
|
media types
|
check paper
|
|
sterilization of media
|
check paper
|
|
advantages of solid media
|
separate colony
quantity morph of colony |
|
disadvantages of solid media
|
small number
|
|
STAPHYLOCOCCUS AUREUS COLONIES
on n agar |
golden yellow colony
|
|
STAPHYLOCOCCUS AUREUS COLONIES
on mannitol salt agar |
yellow colonies (yellow and pink)
|
|
STAPHYLOCOCCUS AUREUS COLONIES
on blood agar |
beta hemolytic (as str but larger and white)
|
|
STAPHYLOCOCCUS AUREUS COLONIES
novobiocin sensitivity test how do u DD by another method? |
um?
|
|
STAPHYLOCOCCUS AUREUS COLONIES
phage typing other methods of typing |
ab and ab s
|
|
phage typing principle
|
st aureus cultured on agar plate, 23 phage are dropped on the plate, each in its marked area... incubation 24 h... the type of strain is designated by phages that lyse it
|
|
phage typing significance
|
to trace the source of infection in the epidemic disease
|
|
phage typing
org we do this technique |
staph aureus epidemic
|
|
STREPTOCOCCUS COLONIES
on blood agar |
beta hemolyitic (clear zone around pin point translucent colonies)
alpha hemolytic (colonies surrounded by greenish zone) |
|
STREPTOCOCCUS COLONIES
optochin test |
sensitive: str p (gr A)
resistant: BHS other than gr A |
|
STREPTOCOCCUS COLONIES
heat resistance test (e fecalis, if growth in 4 quarters) principle |
EF resist heat at 60* for 30 mins
so grow in 4 q |
|
heat resistance test
mention diseases produced by this org? |
UTI
endocord biliary TI |
|
indicators of fecal pollution of h20
|
e coli
cl p e f |
|
STREPTOCOCCUS COLONIES
e fecalis |
it may produce alpha , beta or gamma h
it can grow on ord m and mac , resist heat 60 c 30 min, salt 6.5% |
|
disc diffusion method
other metho |
tube dilution
|
|
disc diffusion method
define the disc |
filter paper containing certain conc of one ab
|
|
disc diffusion method
mention the sensitive and resistant drug in front of you or what are the recommended ab for ur patient |
duh
|
|
disc diffusion method mention the conc of bact used
|
10^8 /ml
|
|
disc diffusion method
enumerate ab acting on cw ptn na |
CW: penicillin, bacitracin, cephalosporin
PTN: aminoglycosides, T and chloramphenicol NA: rifampicin , quinolone, nalidixic acid |
|
tube dilution test:
used for determination of |
MIC
|
|
tube dilution test:
value of mic.. read it principle: |
we do 2 folds dilutions of the tested ab in sterile broth then we culture the organism (10^5 /ml) and one tube cont no ab..... incubation.... we examine the tubes for turbidity
(T= bact growth not inhibited by this conc of antibiotics) |
|
mbc
|
is the least conc of ab (ug/ml) that totally kill the bacterium being tested (it is used in in immunocomp pt and in prolonged therapy) bit in patient with normal immunity or short therapy, MIC is sufficient.
|
|
how do u know it is cidal or static
|
by subculture after MIC... growth... static
no growth.. c (mbc) |
|
CFT result?
|
+ve NoH ( Button like) -ve (hemolysis)
|
|
CFT
organism diagnosed by this test |
TP, CH, rick, Viruses
|
|
CFT indicator system?
|
sensitized sheep rbcs (rbcs + its AB) = IS
|
|
CFT principle:
|
according to the test infront of u
CHECK PICTURES |
|
ELISA
mention the result |
colored wells: +ve
colorless wells: -ve |
|
ELISA
org diagnosed by this method |
hepatitis, AIDS, herpes and TB
|
|
elisa...
check papers for bunch of stuff |
..
|
|
widal rack (widal test)
use |
diagnosis of enteric fever either T or PT and diagnosis of brucellosis by determination of antibody titer (last tube shows agglutination)
|
|
widal rack
principle |
semiquantative tube agg test (serial dilutions of the patient serum + known antigen in a fixed amount)
|
|
widal rack
coaggulation test |
depends on ptn a of st a as in meningitis or NG
|
|
widal rack
latex agg test |
latex beads coated with ab to solutble ag eg capsule for its detection as in meningitis
|
|
single radial diffusion
use |
estimation of diff Ig classes in serum eg IgG
|
|
single radial diffusion
principle |
UK Ag (serum) in well and K Ab (anti Ig) incorporated in agar --> ppt ring (+ve result)
|
|
single radial diffusion
other ppt methods |
double ID as in eleks and V Ag detection, RPR and VDRL
|
|
Seitz filter
type of disc/filtering surface |
asbestos filter
|
|
seitz filter
method of sterilizaiton |
autoclave
|
|
seitz filter uses
|
preparation of bact exotoxin
sterilization of fuild culture media which doesnt stand heat eg sugar m and heat labile biological fluids as serum and antibiotics |
|
syringe filter
sterilization |
by ionizing radiation and used as a (small volumes)
|
|
syringe filter
|
membrane filter, made from cellulose nitrate (adv: its pore size is controllable)
|
|
sintered glass filter
|
ground glass filter
|
|
why glass
|
glass is intert
|
|
sintered glass filter
sterilization |
oven 160-170 c for 1 h
|
|
sintered glass filter
uses |
as a ????????????????
|
|
candle jar CO2 for
|
campylobacter
brucella abortus some haemoph path N |
|
Anaerobic jar (gas pack) for
|
strict anaerobic org eg cl and bacteroids and peptostr
|
|
anaerobic jar
indicator |
methylene blue soaked paper in alumm packet
|
|
anaerobic jar
catalyst used |
palladinized aluminium pellets
|
|
anaerobic jar
mention m replace it |
cmb
|
|
sterile container for urine or sputum
org? |
pneumonae (str pn, st aureus and TB)
|
|
sterile tube (cotton... oven) ( black cover... autoclave)
uses |
collection of urine/pus/csf
|
|
sterile swab
sterilization? |
ionizing radiation
|
|
sterile swab uses
|
rectal vaginal wound and throat swabs
|
|
sterile swab org
|
conjucitivitis : NG and st aureus
|
|
sterile disposable syringe
sterilization: |
ionizing radiation or ethylene oxide gas
|
|
skin disinfection
|
1% iodine in 70% alcohol
|
|
sterile disposable syringe used also for
|
aspiration of blood, pleural fluid, joint fluid, or ascitic fluid
|
|
organisms producing meningitis
|
n meng
str pneumonae |
|
neonatal m:
|
listeria and str agalactia
|
|
tissue culture bottle
types of tcl |
1ry (mnokey k)
semicont(fibroblastic cell) cont (hela , hep2) |
|
virus growth is recognized by
|
CPE
haemadd haemagg F for interference |
|
types of CPE (or cellular changes)
|
rounding, ballooning, synctia
|
|
other methods for virus isolation
|
chick embryo and lab animal
|
|
methods for direct detection of v
|
EM, IF, ELISA, NA PROBE, PCR
|
|
indirect detection of v
|
serology
|
|
autoclave
temp and time |
121 for 20-30 mins
|
|
autoclave principle
|
steam under pressure
|
|
autoclave
uses |
sterilization of all surgical instrumetns
sterilization of culture med that withstands heat eg agar (or ? choose media not str by autoclave) sterilization of glassware with rubber liner |
|
tests for efficiency
|
biological indicator by using resistant bact endospore
chemical indicator by tapes which change color with temp mechanical indicator which rcords the temp and pressure |
|
hot air oven principle
|
it is the main method of dry heat with temp 160 -170 for 1-2 h
|
|
uses
|
str of glassware
str of oil and powders str of steel instruments |