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274 Cards in this Set

  • Front
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What are the requirements for immunogenecity?

Foreignness


Molecular Size


Chemical Complexity


Degradability and interaction with the host's MHC

True or False


An immunogen is an antigen?

True



Which of the following is most likely to induce the greatest adaptive immune response in a 25 year old male?


A. 250,000 Da plasma protein from the same 25 year old man


B. 150,000 Da Toxin produced by a bacterium


C. 500 Da Plasma Protein from a chimpanzee


D. 400 Da cholesterol molecule from a female.

B. 150,000 Da Toxin produced by a bacterium

What is the part of the antigen that is bound by the antigen binding site of a B cell receptor

Epitope

True or False:


All antigens are immunogens

False



What are the fates of antigens that enter the body via blood, skin, or mucosa?

enter into blood- carried to spleen where it interacts with APCs which stimulates B and T cells


enter into skin- become lodged in epidermal, dermal, or subcutaneous tissue which induces the inflammatory response. Antigen becomes trapped by APCs and is transported to lymph nodes. This stimulates the B and T cells


enter into mucosa- become lodged in MALT, interacts with macrophages and lymphocytes, stimulates b cells to produce antibodies

The primary lymphoid organs are those in which


A. Adaptive immune responses are usually intiated


B. Filtration devices remove foreign matter


C. Large Numbers of circulating leukocytes make contact with one another


D. Lymphocytes undergo their development.

D. Lymphocytes undergo their development

Lymph node question: why can't someone who has had lymph nodes removed on the left side of their body not get blood draws or vaccines in the left side?

getting a vaccine in the arm lacking lymph nodes means less likelihood for the antigen to interact with B cells to facilitate a response during a later infection. This also means an area without lymph nodes would be more prone to infection which drawing blood and immunizations can cause.


More susceptibility


lymphedema

Secondary Lymphatic Organs Include

Spleen


Lymph nodes


Tonsils


Appendix


Peyer's Patches


Lymphoid aggregates of mucosal tissue


- mucosa associated lymphoid tissue (MALT)


- gut " " (GALT)


- Bronchus " " (BALT)


- Skin " " (SALT)

_______ lymphatic organs are essential for lymphocyte development, whereas _______ lymphatic organs act as traps for foreign microbes and as sites for activation of lymphocytes

Primary


Secondary

What are some of the benefits of acute phase proteins?

Increased iron binding


increased coagulation


Increased complement proteins


Increased opsonins


Increased cell recruitment

During inflammation which of the following occurs?


Increased vascular permeability


Recruitment of cells


Increased blood flow


All of the above


A and B only

All of the Above


be reminded that if she said "increased blood velocity" instead of blood flow then that would not be correct

What are the hallmark signs of inflammation

redness


pain


swelling


heat



What are some benefits of acute phase proteins

increased iron binding


increased coagulation


increased complement proteins


increased opsonins


increased cell recruitment

A person has been born with a mutation that results in a deficiency in the production of MHC1 by all of their cells. How might this deficiency affect a person immunologically?

Loss of interaction between kIR and MHC1 results in avtivation of NK cells- Cell death of the host


No cytotoxic T cell activation


Immunocompromised due to loss of development of cytotoxic T cells


Death of the individual

Early in an infection the body produces a variety of "acute phase proteins" to ramp up an immune response. What sort of benefits do these acute phase proteins provide and what sort of effect would an inability to induce the production of these proteins have on an individual?

Reduced ability to respond to infection innately and early, leading to reduced recruitment, activation of adaptive cells, etc..


Greater susceptibility, increased extreme infections


Loss of coagulation


Increased free iron for microbes

In what ways can a phagocyte attach to a microbe?

Pattern Recognition receptors bind directly to PAMPS


Pseudopodia attach to microbe


Through use of Opsonins (IgG and complement protein C3b)


NETs (Neutrophils may use this)

Which cell acts as a sentinel and is also involved in the developmental pathways of B and T cell?

Dendritic Cells

Name 3 types of APCs

Dendritic Cells


Macrophages


B Cells



during a hospital stay a catheter was placed into the urethra of a 70 year old male who subsequently developed a urinary bladder infection. One of the factors that most likely contributed to the establishment of the infection was:


A. Introduction of microbes into the urethra during placement of the catheter


B. Placement of the catheter bypassed the protective measures of the urinary tract


C. Sweat and sebaceous secretions


D. All of the Above


E. A and B only



E. A and b only

Which of the following is involved in recognition of intracellular pathogens in innate immune cells?


A. Toll-Like Receptors


B. Antibody


C. NOD-like receptors


D. Complement

C. NOD-like receptors

Digestion of microbes during phagocytosis involves:

both hydrolytic/antimicrobial destruction and oxidative/nitrosative stress that result in microbial death


Also involves acidification and iron sequestration

LPS in the blood will be a bad thing..... why?

LPS binding protein interacts with LPS and associates it with CD14 and ultimately TLR4 on macrophages and other innate cells


Interaction with TLR4 results in espression of inflammatory cytokines


Uncrontrolled inflammation can lead to shock and possibly death.

What is immunity?

Mechanisms used by the body as protection against environmental agents that are recognized as foreign to the body


- protect from pathogens


- eliminate altered self

Exposed to trillions of microbeseach day, as you come in contact of _______ barriers you have a reduction ofmicrobes that get into body, anything past those barriers you have the _______ ______ ________which reduces # of microbes and signals for our _______ cells.The recruit _________ cells that have a specific response to microbes who confers long termprotection in the future

innate


innate immune response


adaptive


adaptive

2 Branches of Immunity

Innate- non specific


Adaptive - specific and long term protection

WHat can a glitch in the immune system cause?

autoimmunity, cancer, or chronic inflammation

Innate cells

Defense against any foreign invader


nonspecific

Innate defenses include:

body surfaces and internal components: skin, mucus membranes, and cough reflex


chemical defense: pH, secreted fatty acid

Comparison between innate and adaptive responses



Innate: no lag period, not antigen specific, no memory development, Immune components are: natural barriers, phagocytes, soluble mediators (complement), pattern recognition molecules (PRM)


Adaptive: lag period (at first exposure, at second exposure it is a quicker response), antigen specific, memory development, immune components: Lymphocytes, antigen recognition molecules (b and t cell receptors), secreted molecules (antibody)

-Patternrecognition molecules (receptors) (PRM of PRR) are part of the innate response. What do they recognize?

PAMPS- pathogen associated molecular patterns

What are some examples of PAMPS

Peptidoglycan, LPS, flagellan

Other features of the innate response

complement, fever, interferons, pattern recognition molecules (toll like receptors (sees a series it recognizes) binds to various microbes), phagocytic cells

Macrophages

also part of the innate response


Macro-large, Phage- to eat


Have receptors that recognize patterns of foreign molecules


upon ingestion of microbe it sends signals to other cells (T cells)


Example of an antigen presenting cells.

Cytokines

can be found in both innate and adaptive


They are hormone like proteins that facilitate communication between cells of the immune system and other cells of the body


alert the other responses that there is something foreign in the system

Adaptive immunity aka Specific Immunity

more specialized than innate, specific defense, immunity is acquired by contact with invader and the response is specific to that invader


Memory response develops

In immunization the initial contact with foreign agent leads to activation of _______and other cells and synthesis of proteins results in acquiring the immunity to withstand subsequent attacks by the same agent. This is the principle behind __________

lymphocytes
vaccination

What are the three forms of immunization

Active


passive


Adoptive

Define active immunization and name the two types of it

administration of antigen: activating your immune response to generate a response & memory


Natural: get sick/contract naturally


Artificial: Vaccine

Define passive immunization and name the two types

Transfer of specific antibody from an immunized individual to a non-immunized individual. Not producing them on your own/no memory


natural- breast feeding, placental transfer


Artificial- IgG therapy, cytokine therapy

Define adoptive receiving immune cells

Transfer of immunity by transfer of immune cells


ie: transfusion, bone marrow, transplants

What are the four requirements for a functional adaptive response?(acquired immune response)

specificity
adaptiveness
discrimination between self and non self
memory

specificity (acquired immune response)

the ability to discriminate between different molecular entities

Adaptiveness (acquired immune response)

the ability to respond to previously unseen molecules. aka: diversity or heterogenecity

discrimination between self and non self (acquired immune response)

ability to recognize and respond to molecules that are foreign (non-self) and to avoid making an attack against self. If you bond to self it will become autoimmunity.


This discrimination is unique to the adaptive response (not innate)

Memory- acquired immune response

ability to recall previous contact with foreign molecules and to respond to it with a more rapid and larger response


aka: Anamnestic response

Name the two types of adaptive cells

T cells


B cells

Clonal selection theory

immune response is based on its ability to recognize antigens. For this to work the system eliminates those that recognizes self proteins as foreign. Lymphocytes ( b and t cells) with receptors that bind to self molecules are eliminated early during lymphocyte development


- cells that bind to self are programmed to die, the ones that don't can proceed to bind to those that are different so that they can become activated

Immune recognition of molecules belonging to self is important to?

ensure that autoimmunity doesn't occur

What is the importance of the clonal selection theory?

Prevent autoimmunity, self vs. non self recognition following their development. Any cell that binds to self are killed during their development and prior to circulating

What are the two branches of adaptive immunity?

B cell (humoral


T cell (cell-mediated)



Humoral Immunity is mediated by ________ ______ and secreted by _____ cells after binding of antigens to specific membrane ____ molecules (b cell receptors

mediated by serum antibodies


- secreted by B cells after binding of antigens to specific membrane Ig molecules (b cell receptors)


Humoral Immunity is mediated by serum antibodies and secreted by B cells after binding of antigens to specific membrane Ig molecules (b cell receptors

When a b cell becomes activated it differentiates into.....

Plasma cells – after they are activated they get rough ER these are pumping out a bunch of antibodies, they no longer have the receptors, they are secreting the antibodies/b cell receptors


And


Memory cells- have a receptor, long lived cell

What is the product of activated B cells

antibodies aka Immunoglobulin (Ig)

Immunoglobulin molecules (Ig)


Their structural features allow them to recognize and bind specifically to a unique structural entity on an _____ of an antigen.

epitope




Preforms a common biologic function after combining with the antigen

Immunoglobin is composed of ____ polypeptide chains linked together by ____ bonds. The chains are made of both ____ and ____ regions. The class of antibody is based on the major class of the ____ chain

four polypeptide chains


linked together by disulfide bonds


chains are made of both constant and variable regions


class of antibody is based on major class of H chain

Define the two polypeptide chains of antibodies


constant


variable regions

constant- determines particular class that Ig belongs to


Variable regions- particular shape and charge that enable the molecule to bind a particular antigen



(class of antibodies)


Main antibody in circulation; only antibody to cross placenta. Associated with memory response,most abundant and long lived antibody in our blood. binds to pathogens, activates complement and enhances phagocytosis

IgG



(class of antibodies)


found in circulation; largest antibody the largest, most commonly found as a pentimer (5 linked together) very effective at agglutination (clumping) because it has so many receptive sites

IgM

(class of antibody)


found in secretions such as saliva and milk prevents pathogens from attaching to epithelial cells in digestive an respiratory tract


IgA



found as antigen receptor on basophils and mast cells in tissue responsible for immediate allergic response and protection against parasitic worms (class of antibody)

IgE

IgE = eewwwwww b/c of parasites

(class of antibody)


found on surface of immature B cells. - Signifies the b cell passed clonal selection

IgD

What are the four requirements for a functional adaptive response?

Memory, adaptiveness, discrimination between self and non self, specificity

What is importance of the clonal selection theory?

Prevent autoimmunity, self vs non self-recognition following their development, any cell that binds to self are killed during their development and prior to circulating

To which two cell types does a b cell differentiate into upon activation?

- Plasma cells and memory B cells

Conferring protection to a developing fetus through the transfer of IgG across the placenta is an example of providing immunity by which type of immunization?

passive

What is the purpose of IgD?

- Signifies the b cell passed clonal selection

T cells bind to specific antigens using....

t cell receptors

T cells interact with an antigen expressed on an ______

Antigen presenting cell

Types of antigen presenting cells

macrophages, dendritic cells, and B cells

What do Antigen presenting cells do?

They process and present antigens to specific receptors on T cells.

What are the molecules that present antigens?

MHC1 and MHC2

MHC1 is on all healthy nucleated cells. what does it do

-Tells us what's going on inside of the cell


-Presents cytosolic derived proteins.


-Viruses will be processed and presented on MHC1.


-The T cells will recognize this, they’re looking for a specific peptide in MHC1



Cytotoxic T cells can only see their specific antigen when it is presented on _____

MHC1

MHC II are extracellular derived proteins. What type of T cell can they present to? and where are they found?

Can present to Helper T Cells- will only recognize peptides in MCHII


-Solely found on antigen presenting cells (APCs) such as Macrophages -Dendritic cells -B cells

Helper T cells what do they express and what do they interact with?

express CD4 co-receptor which interacts with MHCII

Cytotoxic T Cells- what do they express and what do they interact with?

Express CD8 co-receptor which interacts with MHCI

3 classes of cells responsible for functional adaptive response?

T cells


B Cells


APCs

Functions of Helper T Cells

cooperation with B cells to enhance the production of antibodies


Inflammatory effects


Cytotoxic effects- t cell kills the cell that has cytotoxic effects


regulatory effects


cytokine effects



What are the benefits of immunology

integral role in prevention of and recovery from infectious diseases


essential to the survival of the individual


development of immunoprophylaxis

What are some damaging effects of the immune response

in the process of the immune response collateral damage occurs due to inflammation, cytokine production (ie itchiness, redness, burning sensation etc..)


Allergic response- is a hypersensitivity and overactive immune response

There are four primary types of hypersensitivity reactions. We can put them into two categories what are they?

category 1: antibody mediated (3 types are antibody mediated)


category 2: T cell mediated (1 type is t cell mediated)

What happens if there is no immune response or a loss in a component involved in the immune response?

Immunodeficiency more susceptible to getting sick. Also true if your lacking an innate component (macrophages) or lacking skin

t/f an activated t cell produces antibody?

False

t/f CD8 cytotoxic t cells bind to peptide in a MHC class I molecule

True

Cd4 is found on which type of t cell?

Helper T cell

Postulates of clonal selection

T and B lymphocytes of heterogeneous specificities exist before there is any contact with the foreign antigen. Lymphocytes participating in an immune response express antigen-specific receptors on their surface membranes Upon antigen binding, the cell is activated and releases various products

Innate Immune defenses: what do they do? What are they made up of? where are they found? Are they specific?

First line of defense- limits # of harmful microbes


act upon any invading pathogen


made up of molecules and cellular processes that defend host within minutes to hours after exposure


found in plants vertebrates and invertebrates


sends cellular signals to let other cells know there is a problem


non specific, just looking for pamps

Innate immune defenses include:

Barriers - physical, chemical, biological


cellular defenses- phagocytes


Humoral (found in the blood) defenses- complement, cytokines

What do burn patients, smokers, and patients receiving long term antibiotic or chemotherapeutic drugs have in common

poor response of t cells, lacking barrier protection in burn victims, smokers- cilia lines trachea which propel things up in the mucus, cilia is lost in smokers. Causes ciliastasis

Name the three types of physical barriers

skin


mucociliary escalator- cilia in the trachea


flushing of bladder- mechanical barrier(you get a UTI because you're not flushing things out/urinating)

Skin barriers: epidermis


How does it protect against harmful bacteria?

-Tight junctions


-Impermeable- because it is a keratinized layer, layers of dead cells that is waterproofing and hardened


-Dry


-Acidic pH- as you age there are transitions in overall skin pH.Differences in susceptibility, diet can also change it


-Sebum-antimicrobial


-Sloughing of the skin

Skin Antimicrobial Compounds:


Lysozyme

found in sweat, cleaves the peptidoglycan (cell wall)

Skin Antimicrobial compounds


Defensins

antimicrobial peptides that cause lyses to the cell by inserting into the membrane

Skin antimicrobial compounds


Cathelicidins are found in the ______ and the ____ they insert into the membrane and cause ______

epidermis and dermis. Insert into membrane and cause lyses

The skin also has ______ which is beneficial because they take up space and produce toxic compounds around them to inhibit anything that tries to take up residence around them. Kills things that try to take up their space

Microbiota

what are dendritic cells that are found in the dermis?

Langerhans cells

mucous membranes barrier defenses

Lysozyme Defensins pH differences- pH of the ilium is very acidic


Mucous-sticky Microbiota- found in the majority of mucous membranes


Depending on the location you'll find cilia (respiratory) intestinal tract movement of food is the continuous movement rapid flow so microbes can’t hang on and grow.


sIgA- secretory IgA- enhances the stickiness of mucus-Abundance of this in the mucousa it enhances the ability to trap microbes

Chemical barriers

◦Sweat Contains sebum, an antimicrobial fatty acid


Acidic pH


◦Hydrolytic enzymes, Lysozyme, ie: Tears


◦HCl Parietal cells in stomach


◦Defensins Anti-microbial

Biological Barriers

◦Normal microbiota Microbes that naturally inhabit the body Defend against invasion


- Competition


- Antimicrobial substances

Cellular Defenses: specialized cells whose purpose is to destroy the invader. Name the cells that act as cellular defenses

Polymorphonuclear


leukocytes


macrophages


dendritic cells


natural killer cells

Our immune cells are derived from ?

progenitor cells


the stem cell differentiates into progenitor cells

Majority of innate cells will be derived from the _____ progenitor

Myeloid

What types of cells form from the lymphoid progenitor?

NK cell, T cell and B cell

Cells that are involved in the innate immune system are involved in assisting the induction of specific immune cells. __________ presentation and _________ production

antigen


cytokine


cytokine can send out a signal saying there is something foreign-can recruit other cells or can stimulate bone marrow to pump out more innate cells

Polymorphonuclear Leukocytes (PMN Cells) Types

◦Granulocytes : Basophils, Mast Cells, Neutrophils, Eosinophils

______ cells contain enzyme rich lysosomes for destroying pathogens and also produce peroxide, superoxide radicals, and other bacterial proteins

PMN

What type of PMN cell comprises 60% of peripheral blood leukocyte, is effective at killing bacteria.

neutrophils

The increase in the number of neutrophils is an indication of an ___________ __________

acute infection


phagocytic cells will increase in acute infection, NOT antigen presenting cells

What releases histamine (inflammation)

Basophils

What are present during allergic reactions and parasitic infections?

eosinophils


they produce major basic protein that destroys parasites

catoionic proteins are associated with eosinophils. what do they do?

can insert membrane of parasite and result in lyses/cell death

MHC1 presents antigens from which environment? To which cell does it present peptides?

- Intracellular environment


- Cytotoxic t cells

What are benefits of skin?

Salt, Antimicrobial compounds, impermeable, dry, sloughing,sebum, acidic, microbiota, cathelicidins, lysozyme, UVexposure, barrier, keratin

T/F if a pathogen bypasses the epidermis its home free because there is no protective measure in dermis

false

Pathogen associated molecular patterns are recognized by _______ ________ _______of the innate immune system

pattern recognition receptors

3 types of APCs

Macrophage, dendritic cells, B cells

What cell type is associated with parasitic removal?

Eosinophils

What are the benefits of mucus?

Sticky, antibacterial components, microbiota, sIgA,

What functions to engulf and digest invaders, acts as an APC, and is derived from monocytes (found in the bone marrow)

Macrophages

Macrophages differentiate into

Kupffer cells- found in the liver


Alveolar macrophages- lung


Splenic macrophages- spleen


Peritoneal macrophages - abdominal cavity


Microglial cells- nervous tissue (helps to clean up the damaged tissue)

Macrophages are included in the reticulo endothelial system (RES) since we can find them in the endothelial lining of blood vessels and lymphatic tissues. what do they do?

recognize pamps and foreign entities, release cytokines, Bind to foreign PAMPS using PRMs which can initiate phagocytosis to engulf and destroy those cells.

What removes dying circulating cells ?

Macrophages

Macrophages are APCs


T/F

True

what is the #1 APC for activating T cells?

Dendritic cells

Where are dendritic cells found?

in T cell areas of lymphoid tissues and in non lymphoid tissues throughout the body

Dendritic cells act to stimulate the ________ immune response

adaptive

Dendritic cells are used during the development of B and T cells. What types are used for T cell development? B cell development?

T cell- Medullary dendritic cells


B cell- follicular dendritic cells

Large granular lymphocytes that are able to lyse certain virus-infected cells and tumor cells without prior stimulation, Also recognize membranes of altered cells and kill targeted cells

Natural Killer cells

NK cells are derived from the ______ progenitor

lymphoid

Explain how NK cells recognize and kill infectedcells

The NK Cell has killing Inhibitory receptor (KIR) Which is looking forMCH1. It also has a Killing Activating Receptor (KAR). If the healthy cell has MHC1 the NK cell will bind to it, but not kill it. If it lacks MHC1 (it is dying/or infected cell) then nothing will engage KIR, but KAR is engaged and it sends a positive signal to release killing molecules Perforin: forms pores in the dying cell, and Granzymes- which activates apoptosis. This will kill the cell

Natural Killer T Cells are non specific cells. what do they do?

These are not looking for MHC They just look for lipids in a CD1 receptor (which is a receptor on the host) Natural killer t cell produces cytokines that trigger cell death (apoptosis).

NKT cells are NOT the same as NK cells. What are they?

◦NKT cells are T cells with an αβ TCR.


Also express some of the cell-surface molecules of NK cells — hence their name.

NKT cells are able to secrete large amounts of either

◦IFN-γ,a major cytokine of Th1 immune responses


◦IL-4and IL-3, the major cytokines of Th2 responses.

Aid in protective immunity at the acute phase of infections, tissue remodeling, anatomical containment, wound healing, and maintaining epithelial integrity at mucosal sites.Have been associated with pathophysiological conditions. Common lymphoid progenitor Do not have rearranged receptors. Produce an array of cytokines to influence other cells and influence inflammation seen prevalently in the inflammatory response

Innate Lymphoid cells

what are cells that eat or engulf foreign materials, circulate through the body, guard the skin & mucous membranes against invasion by microorganisms

Phagocytes

What are 2 examples of phagocytes?

neutrophils and macrophages

Phagocytes engulf bacteria. If they can't engulf a cell due to biofilm etc... what do they do?

they basically spew their cytotoxic stuff on the cells which can cause problems

Specialized cells destroy invaders by ingesting and then destroying it. what is this called?

phagocytosis- takes it into cell and ingests it


endocytosis through pinocytosis (the ingestion of liquid into a cell by the budding of small vesicles from the cell membrane.) or receptor mediated ( specific molecules are ingested into the cell. The specificity results from a receptor-ligand interaction. Receptors on the plasma membrane of the target tissue will specifically bind to ligands on the outside of the cell.)

Specialized cells destroy invaders by ______ _______ preformed without ingesting the invader

extracellular killing- release oxidative and analytic components from granules

Phagocytosis

Process by which phagocytes digest & destroy invading microbes

Neutrophils & macrophages use 4 step process to destroy invading microbe (phagocytosis). Define these

Find- chemotax is to find PAMPS PRM to find PAMPS cytokines- chemokine (chemokine tells you it is acting as an attractant and is still a cytokine)Compliment proteins that act as attractants (C3a, C4a, C5a)


Adhere to: PAMP binding by PRR activates phagocyte


Ingest: phagocyte ingests microbes enlarges and increases metabolic activity


Digest: -Destroy microbe by


-Oxidative/nitrosative stress-Various oxygen or nitrogen radicals can cause oxidation to protein.


-Hydrolytic/Acidification/Iron Binding-Killing by using antimicrobial peptides which causes lyses.

adherence (phagocytosis)

◦Phagocyte binds to microbe


◦Opsonins enhance adherence



(adhere) The phagocyte can use the PRM to bind to PAMP. There are two ways to do this. Psudopodia, and Neutrophil Extracellular Trap (NET) define these

Pseudopodia- send out projections as a means to capture Neutrophil Extracellular Trap (NET) – like spider mans web. Neutrophil detects something foreign using PRM and sends out a net which has protein, antimicrobial compounds, sugars, and DNA and it captures these cells and to initiate the killing of the foreign cell

(adhere) The phagocyte can also bind to opsonins. describe these methods

-Opsonins C3b bind to PAMPS on the surface of a microbe. The macrophage then has a complement receptor that binds to the opsonins and initiates attachment. It then professes to ingestions


-Opsonin IgG is bound to something specific on the microbe and the macrophage has a receptor known as the FC receptor which recognizes the FC region of IgG and binds. It then progresses to ingestion

What are the two categories of opsonins

complement protein C3b


IgG

Pattern recognition receptors in phagocytes are receptors associated with the innate response that lack specificity. What do they recognize?

They recognize conserved microbial structures (PAMPS).

What toll like receptor is found on macrophages and detects LPS?

TLR4- on the macrophage detects LPS causing the macrophage to release inflammatory cytokines


Also LPS binding proteins can take LPS to the TLR4 which releases the inflammatory cytokines. Bad??I think if there is too many, but not quite sure

Ingest (phagocytosis)

-Enclose the microbe into a phagosome (phagosome is a membrane bound compartment)


-For digestion to occur there is a reduction in pH in the phagosome which results in the fusion between the phagosome and the lysosome inside of the cell. This forms the phagolysosome.

Digestion: destroys the microbe by? (two things)

-Oxidative/nitrosative stress-Various oxygen or nitrogen radicals cancause oxidation to protein. -Hydrolytic/Acidification/Iron Binding-Killing by using antimicrobial peptides which causes lyses.

Digestion: lysozymes found in phagocytic cytoplasm contain digestive enzymes and small proteins called _____ that fuse with _____ forming _______

defensins, phagosome, phagolysosome

◦Damage to microorganisms occurs via: (digestion)

Acidification Toxic oxygen- derived products (superoxides,hydrogen peroxide)


Toxic nitrogen oxides Antimicrobial peptides Antimicrobial enzymes Iron sequestration molecules

A complex of proteins called phagocyte oxidase in the membrane of a phagolysosome generates oxygen radicals in the phagosome. A single electron is taken from NADPH and added to oxygen,partially reducing it. The resulting highly reactive molecules react with proteins, lipids and other biological molecules

Oxygen Radicals

synthesizes nitric oxide, a reactive substance that reacts with super oxide to create further molecules that damage various biological molecules.

Nitric oxide synthase

Defensins and what other peptides attack bacterial cell membranes. Similar molecules are found throughout much of the animal kingdom.

Anti-Microbial Peptides.

Lactoferrin binds iron ions, which are necessary for growth of bacteria. Another protein binds vitamin B12. Which protein is that?

Binding Proteins

Inflammation is a response to an infection. phagocytes are activated to release _______.


______ are activated. Increased _______ _______ which is important so white blood cells can get out of blood vessels and go and clear up foreign entities that entered the body. ________ blood flow and _____ in blood velocity

phagocytes are activated to release cytokines


Immune cell recruitment◦


lymphocytes are activated


◦Increased vascular permeability


Increased blood flow, but you’ll see a reduction in blood velocity

Which leukocyte becomes activated by the absence of MCH1?


And what is the effect of this cells activation

NK Cells- Produces perforin and Granzyme Apoptosis of cell

What are the stages of phagocytosis

Find


Adhere to


Ingest


Digest the microbes

What is involved in recognition of intracellular pathogens in innate immune cells

Nod like receptors

3 Hallmark signs of infection and why?

Redness, pain, swelling,


heat: blood flow causes redness and heat,


pain is from cytokines and other proteins, swelling because we have vascular permeability also anywhere you have blood vessels you have lymphatic fluid as well

In inflammation, what induces the expression of adhesion molecules on endothelial cells slowing down other cells and creating speed bumps/road blocks



Cytokine and kinin

within minutes of injury, increased production of ____ _____ _____ happens called the ___ _____ _____

acute phase proteins


acute phase response

acute phase proteins induce localized and systemic response. This results in activation of ____ and ______ system

kinins and coagulation systems

proteins that are expressed early in infection. Will see the increased production by the liver. They assist in the inflammatory response and reduction of microbial presence. Will also see increased coagulation protein, recruitment, and they can act as an opsonin

acute phase proteins

acute phase proteins are iron binding. Why is that important?

bacterial cells need iron by inducing iron binding you reduce the ability of bacteria to replicate.

Kinins are a type of acute phase protein. what does it do?

◦Cause smooth muscle contraction◦


Acton axons to block nervous impulses


◦Nerve stimulators


Pain and itching


◦Increase vascular permeability and expression of endothelial cell adhesion molecules (ECAMS)

The systemic inflammatory response includes

Fever, increased white blood cells, increased hydocortisone and ACTH, production of acute phase proteins (c reactive protein) This systemic response can start even just from inflamed mosquito bites and is also seen in autoimmune disease

Occurs in cases of chronic infection or chronic activation of the immune response

chronic inflammation


example: asthma

Fever is caused by

bacterial products like endotoxins


cytokines also can trigger fever such as IL-1- primary cytokine in fever, the more you have the more it increases your fever can be either endogenous or pyrogen

Innate Humoral Defenses: multiple proteins produced in the liver. They act as a cascade? How?

Enhance phagocytosis through opsonization


Lyse microorganisms


Generate peptide fragments that regulate inflammation and immune responses

Glycoproteins produced by a variety cells such as monocytes, macrophages, NK cells, Lymphocytes, and endothelial cells are?

cytokines, they can have an affect locally and distally. They are produced during early stages of infection

Key criteria required for Adaptive Immunity

1.Adaptiveness/heterogeneity


2.Recognition of self vs non self (developed by clonal selection)


3.Memory


4.specificity

Humoral Immunity (adaptive immune response)

B cell Mediated response which produce antibodies

Cell Mediated Immunity (adaptive immune response

T lymphocyte, cannot simply bind to antigen, APC's process and present antigen to T cell activating the T cell

Helper T cells aka

CD4

Cytotoxic T cells aka

CD8

_______ presents to T cells?

MHCII

What are APC cells which present MHCII?

Macrophages, dendritic, and B cells

MHCI presents to ______ t cells

cytotoxic

•Organs in which lymphocyte maturation, differentiation, and proliferation take place

Lymphatic organs

lymphatic organs function to:

•Collect excess fluid from the spaces between body cells;•


Transports digested fats to the cardiovascular system•


Provides many of the nonspecific & specific defense mechanism.A place to come in contact with innate and adaptive cells

Primary lymphoid organs

Thymus gland- stem cells migrate to thymus and they come in contact with dendritic cells. Thymus provides key points of contact for development of T cells. If you don’t have this then you don’t have T cells


bone marrow- is where we have the developmental pathway of B cells



Secondary lymphoid organs

structures in which mature lymphocytes are stimulated by antigens

secondary lymphoid organs function

trap and concentrate foreign material, activation of adaptive cells


induction of b cells to produce antibodies


induction of antigen specific T cells

Secondary organs include

all removable


Spleen


Lymphnodes


Tonsils


Appendix


Peyer’s Patches


Lymphoid aggregates of mucosal tissue


- Mucosa- associated lymphoid tissue (MALT) - Gut-associated lymphoid tissue (GALT) - Bronchus- associated lymphoid tissue (BALT)

what is the largest secondary lymphoid organ

spleen


the spleen is the major organ in which antibodies are synthesized and released. They are composed of?

white pulp- rich in lymphoid cells


Red Pulp- contains many sinuses, erythrocytes, and macrophages

Lymph nodes are composed of

edulla with many sinuses and a cortex surrounded by a capsule of connective tissue


The cortical region of the lymph node contains

primary lymphoid follicles- these structures enlarge after antigenic stimulation (due to formation of secondary lymphoid follicles that contain B cells which are undergoing mitosis)

•Following antigenic stimulation in lymph node, B cells undergo ______ ______

affinity maturation where they generate clones having similar affinity receptors for antigen response

What does the lymph node cortex contain? What do the deep cortical region of lymph nodes contain?

APC's and B cells




T cells and Dendritic cells

explain lymphocyte re circulation

•Lymphocytes enter lymph nodes through afferent lymphatic vessels•


Leave lymph node through efferent vessels•


Converge in thoracic duct•


Empties into vena cava

An antigen that penetrates defenses of the immune system will take the following path if it enters into the bloodstream

•Carried to spleen, where it interacts with APCs...stimulates B and T cells

An antigen that penetrates defenses of the immune system will take the following path if it enters into the skin

•Become lodged in epidermal, dermal, or subcutaneous tissue•Induces inflammatory response•Antigen becomes trapped by APCs and is transported to lymph nodes•Stimulation of B and T cells

An antigen that penetrates defenses of the immune system will take the following path if it enters into the gastrointestinal or respiratory tract

•Become lodged in MALT•Interacts with macrophages and lymphocytes•Stimulation of B cells to produce antibodies

Innate and Adaptive Responses interact

Out of control innate immune defenses can result in....

septic shock

out of control adaptive defenses can result in......

autoimmune disease

Immunogens are

antigens that bind lymphocyte receptors and activate their response

Antigen

any molecule that has the ability to bind to lymphocyte receptors and may or may not lead to activation

The part of the antigen that your antigen binding site is binding

eptiopes

Part of the receptor that binds to the epitope

paratope

Hallmark molecules of adaptive immune response are:

antibody


t cell receptors

Immunogen is an agent capable of stimulating _____ ______

the immune response

The immune response is evoked by an ______ or _______

antigen or immunogen



antigen

any antigen capable of binding specifically to components of the immune system (BCR, Antibodies)

T/F All immunogens are antigens?

True

T/F every antigen is an immunogen

False: not all compounds that can be bound by antibody stimulate an immune response

A compound that cannot induce an immune response by itself

hapten


Dyes found in your food are haptens, they’re small, not complex.

When will lead Hapten to induce an immune response?

If it is linked to or conjugated to a carrier molecule that is immunogenic this will lead to activation of the immune response

Part of an antigen that combines with a specific antibody or T cell receptor(Antigenic determinant)

epitope

Hapten-carrier conjugates are _______



immunogenic

Requirements for Immunogenicity

Foreignness (more likely to be recognized)


Molecular size (need a large molecular weight)


Chemical Complexity (not being all the same thing)


Degradability and Interaction with the host's MHC- has to do with T cell response. If you have an inability to break up that antigen you won’t get lymphocyte activation or t cell activation

Because of self vs non self recognition, the more foreign the substance is, the more ______ it is

immunogenic

small substances are ______ immunogenic

less


most active immunogens have a molecular mass of 100,000 Da

Chemical complexity _______ immunogenecity

increases

What are the most immunogenic of our macromolecules and why?

proteins, because because theyr’e more complex. Leads to greater binding and more activation of lymphocytes overall

How can we increase our chemical complexity?

Can take a copolymer to add glu-ala-lys it is now immunogenic

Macromolecules that cannot be degraded and processed by APCs and presented with MHCs are _____ immunogens

poor


Antigen presentation is necessary to activate_____

t cells

Tcells really only respond to protein. A good protein antigen is

stable enough to reach the site of interaction with T or B cells


Able to be enzymatically degraded by proteases of an APC

Peptides of D-amino acids are not immunogenic, but L-isomers are. Why?

We primarily have L isomers in our protein. Bacteria can be solely D isomers we will not be able to degrade them appropriately and will not illicit an immune response

Carbohydrates can activate B cells, but don't activate T cells. T/F

True.


B cells can bind to anything

There was a new study that suggests you can have an activation of T cells through carbohydrates. how?

You can have breakdown of carbohydrate withinthe cell and load it onto mhc2 so you can present carbs to t cell

How can genetics affect immunogenecity



Species


Individual Responders vs Non-responders


Genotypeof individual influences whether a given compound will stimulate an immune response


Differences in genes of the MHC


.Individual repertoires of B and T cells


Not every antigen-specific receptor is present

How can dose affect immunogenecity?

Dosage can be: Too low (not enough to activate lymphocytes) or Too high (inducing tolerance).


Number of doses also affects outcome of the immune response

Routes of administration for immunogenecity

subcutaneous


intravenous


Intragastric


Intranasal

Subcutaneous route of administration

breath through skin, carries antigen to neares lymphnode


Elicitsstrong response due to potent antigen presenting ability of Langerhans cells

Intravenous route of administration

Antigens go to spleen, induce tolerance or induce response.

Intragastric Route of Administration

Antigens often produce systemic tolerance, but sometimes elicit local antibody response

Intranasal Route of administration

antigens often elicit allergic response

binding of antigen to antibody or lymphocyte is _____

specific

Immune cells do not recognize an entire immunogen molecule. What do they recognize?

discrete sites on the macromolecule, Ie: epitopes, a single antigen may have numberous epitopes

what are areas in the antigen binding pocket that give that whole specificity, these are regions of hyper variability. This gives specificity for that recognition

Complementary determining regions (CDR)

Antibody binds epitope based on the ____ _____ ____, formed from several hypervariable regions

complementarity-determining region (CDR)

Paratope is the same size as epitope? T/f

True, paratope is a complementary antibody-combining site

Paratope is the part of the antibody that binds to the ________on the antigen

epitope

The eptiope that binds the T cell receptor is how many amino acids? It is also functionally ______ because of noncovalent association with MHC proteins on MHC

8-12 amino acids


funcitonally larger

Trimolecular complex forms when (t cell receptor)

TCR binds MHC + epitope complexes

B cells have _____ binding


T cells need....

Direct


Presentation by MHC and most commonly will be a peptide

Antibody or TCR binds to antigen ______

noncovalently

Noncovalent binding may involve

electrostatic interactions


hydrophobic interactions


hydrogen bonds


van der Waals forces

Non covalent interactions are _____ so _____are required for good bonding

weak


many


Interaction between antigen and its complementary site must cover enough area to maximize available interactions


When we have this binding we’ll have a variety of non covalent bonds and ionic bondsas well. Themore specificity will have greater affinity because you’ll have more chemicalinteractions there.

B cells can bind to both _____ and _______ epitopes whereas T cells can only recognize ____

linear and conformational (conformational is when the epitope is only formed when it is folded together, once it is unfolded the epitope goes away)


linear

______ Cells are able to only bind to that which is accessable/that which is exposed. Cannot recognize something inside of the cell.

B

_______ Cells can recognize things that are inside a cell because MHC1 presents it

T cells

______ cells have the ability to bind to soluble proteins and molecules (antigens)

B

When a B cell binds to that which is soluble it can precipitate it so that other cells can attack it t/f

true

Can T cells bind to soluble proteins?

No, they can only bind to that which is presented. It has to be tangible

Differences between antigen recognition by B and T cells


Antigen interaction:


Nature of Antigens:


Binding of Soluble Antigens:


Epitopes recognized:

Antigen Intereaction: B cells- b cell receptor binds to antigen------ T cells- T cell receptor binds antigenic peptides bound to MHC


Nature of Antigens: B cells- protein, polysaccharid, lipid------T cells- peptide


Binding of soluble antigens? B cells yes ------ T cells no


Epitopes recognized: B cells- accessible, sequential, nonsequential------ T cells, Internal linear peptides produced by antigen processing

Proteins, polysaccharides, nucleic acids, lipids (some glycolipids and phospholipids can be immunogenic for T cells and ilicit a cell mediated immune response) are examples of the ___________ nature of immunogens

chemical

Some things when coupled with a carrier can become an immunogen. Provide examples

drugs, haptens, food additives, cosmetics, antibiotics, small synthetic peptides

Carbohydrates are a major chemical that may be antigenic and can induce _______ response in the absense of T cell help. ______ are more immunogenic when associated with protein or lipid carriers. ________ are usually immunogenic. ABO blood group reactions are based on _____ on RBCs

can induce antibody response in absence of T cell help


polysaccharides are more immunogenic when associated with protein or lipid carriers


glycoprotiens are usually immunogenic


ABO blood group reactions are based on polysaccharides on RBCs (if your given someone elses blood type then it will attack those foreign plasma cells)

Same sugars alone are or are not immunogenc?

They are not immunogenic

Lipids can be antigens, but they are rarely immunogenic. How is the response induced?

by binding lipids to protein carriers


Glycolipids and sphinigolipids may also be immunogenic

Nucleic acids are the _______ immunogenic of the categories

least,


They are poor immunogens unless conjugated to protein carriers

Native helical DNA is normally immunogenic? T/f

false

immune responses to nucleic acid sometimes occur. Give an example of when?

systemic lupus erythematosus (SLE)

Proteins are virtually all immunogenic. why?

The more complex proteins stimulate more vigorous immune responses. Proteins are large and complex and contain multiple epitopes

Explain Cross reactivity

Even though it is not the perfect antigen to bind to, it is similar enough to bind to start activation. This is great because we rely on it for vaccines since injecting the actual microbe can actually kill you

2 different forms of cross reactivity

homologous


heterologous

Homologous cross reactivity

means the same. Using antigen from microbe for which you want protection


-Example DTaP vaccine- we have diphtheria toxoid, tetanus toxoid, and Pertussis toxoid & other adhesins. Toxoid is the term that is used for an inactivated toxin. By inactivating these toxins and changing the structures it is not in its active form but will confer protection against that toxin if you come into contact with it- Example-flu vaccine

Heterologous cross reactivity

using something similar but different to protect against another organism-


example: small pox vaccine- were using cowpox to protect against smallpox. Don’t actually inject smallpox but cowpox has Similar epitopes on the surface so if your body was to see smallpox you’d be protected against it.

Cross reactive molecules may:

share a source


be unrelated to each other except for having common epitopes somewhere in their structures


example: Blood group a and b can cross react with your blood type antigen when they get certain illnesses



Substances that enhance an immune response to an antigen that has low immunogenicity


Also used when only a small amount of antigen is available. used a lot in vaccines

adjuvants

adjuvants will make a hapten immunogenic


t/f

false.

adjuvant mechanisms work by....

Increasing half-life of vaccine antigen


Increasing cytokine production in local inflammation


Improving antigen delivery, processing and presentation by APCs (esp. dendritic cells)

The only adjuvant approved for the U.S. is Aluminum hydroxide and aluminum phosphate (alum). How does it work

Alum as inorganic salt binds proteins, causes proteins to precipitate and elicit an inflammatory response, increases immunogenicity of the antigen nonspecifically, precipitated antigen is released more slowly at injection site, larger size due to precipitation, increases likelihood that it will be phagocytized

Freund’s complete adjuvant (FCA) is killed Mycobacterium tuberculosis or M. butyricume mulsified in oil with aqueous antigen solution. how does it work?

Oil causes slower release of the protein Muramyl dipeptide activates dendritic cells and macrophages Activated cells are more phagocytic and express higher levels of the costimulation molecules for enhanced T cell response

what is that adjuvant that contains antigen in aqueous solution, mineral oil, and an emulsifying agent that disperses the oil into small droplets around the antigen

Freund’s incomplete adjuvant (FiCA)

Alum and Freunds adjuvants stimulate local chronic inflammatory response and attracts phagocytes and lymphocytes. Infiltration of these cells may result in the formulation of a _____

granuloma because you have such a great response they start to wall off the antigen and now this is stuck in a hardened pocket. This causes a granuloma

Explain the first exposure to an immunogen/primary response

T cell activation B cell activation to make and secrete antibody


-Long delay because you haven’t encountered it before. You have to become activated-


Primary antibody that you will have is IgM which will be expressed then decrease as you fight the infection-


What were relying on in vaccines

Explain second exposure to the same immunogen/secondary response



-Memory or Anamnestic response.


-Reduced to no lag-Will have a lot more antibody because we have more cells becoming activated


-We also see isotype switching to IgG. More IgG expressed than IgM--