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136 Cards in this Set
- Front
- Back
Bacterial Structure:
What is the function and chemical composition of Peptidoglycan |
Function: It gives rigid support and protect against osmotic pressure
CC: Sugar backbone with cross-linked peptide side chains |
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Bacterial Structure:
What is the function and chemical composition of the CELL WALL/CELL MEMBRANE of gram positives |
Function: Major surface antigen
CC: Peptidoglycan for support and Teichoic acid induces TNF and IL 1 |
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Bacterial Structure:
What is the function and chemical composition of the OUTER MEMBRANE of gram negatives |
Function: the site of endotoxin (lipopolysaccharide); major surface antigen
CC: Lipid A induces TNF and IL-1; polysaccharide is the antigen |
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Bacterial Structure:
What is the function and chemical composition of the PLASMA MEMBRANE |
F: site of oxidative & transport enzymes.
CC: Lipoprotein bilayer |
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Bacterial Structure:
What is the function and chemical composition of RIBOSOMES |
F: protein synthesis
CC: 50S & 30S subunits |
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Bacterial Structure:
What is the function and chemical composition of PERIPLASM |
F: space b/t the cytoplasmic membrane & outer membrane in gram NEG. bacteria
CC: contains many hydrolytic enzymes including beta lactamases |
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Bacterial Structure:
What is the function and chemical composition of the CAPSULE |
F: protects against phagocytosis
CC: polysaccharide (except BACILLUS ANTHRACIS, which contains D-glutamate) |
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Bacterial Structure:
What is the function and chemical composition of the PILUS/FIMBRIA |
F: Mediates adherence of bacteria to cell surface; sex pilus forms attachment b/t 2 bacteria during conjugation
CC: Glycoprotein |
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Bacterial Structure:
What is the function and chemical composition of FLAGELLUM |
F: motility
CC: protien |
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Bacterial Structure:
What is the function and chemical composition of the SPORE |
F: provides resistance to dehydration, heat, and chemicals
CC: Keratin-like coat; dipicolinic acid |
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Bacterial Structure:
What is the function and chemical composition of the PLASMID |
F: It contains a variety of genes for antibiotic resistance, enzymes and toxins
CC: DNA |
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Bacterial Structure:
What is the function and chemical composition of GLYCOCALYX |
F: It mediates adherence to surfaces, especially foreign surfaces (ie: indwelling catheters)
CC: Polysaccharide |
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What part of the cell wall is unique to gram positive organisms?
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Teichoic acid
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What part of the cell wall is unique to gram negative organisms?
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Endotoxin/LPS (outer membrane)
Periplasmic Space (location of many B lactamases) |
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What parts of the cell wall are found in both gram negatives and gram positives?
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1. Flagellum
2. Pilus 3. Capsule 4. Peptidoglycan 5. Cytoplasmic Membrane |
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Name the two gram positive Cocci?
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1. Staphylococcus
2. Streptococcus |
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Name the gram Negative Cocci
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1. Neisseria
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Name the 5 gram positive Bacilli (Rods).
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1. Clostridium
2. Cornyebacterium 3. Bacillus 4. Listeria 5. Mycobacterium (acid fast) |
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What are the 13 enteric organisms (gram negatives)?
FYI: these are all bacilli (rods) |
1. E. Coli
2. Shigella 3. Salmonella 4. Yersinia 5. Klebsiella 6. Proteus 7. Enterobacter 8. Serratia 9. Vibrio 10. Campylobacter 11. Helicobacter 12. Pseudomonas 13. Bacteroides |
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what are the 10 gram negative bacilli (rods)?
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1. All 13 enterics
2. Haemophilus 3. Legionella (silver) 4. Bordetella 5. Yersinia 6. Francisella 7. Brucella 8. Pasteurella 9. Bartonella 10. Garderella (gram variable) |
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What are the two gram positive branching filamentous organisms?
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1. Actinomyces
2. Nocardia (weakly acid fast) |
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What are the two Gram negative pleomorphic organisms?
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1. Rickettsiae
2. Chlamydiae (Giemsa) |
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What are the 3 gram negative spirochetes?
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1. Leptospira
2. Borrelia (Giemsa) 3. Treponema |
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what organism has no cell wall and instead has sterols?
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Mycoplasma
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These contain mycolic acid and high lipid content
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Mycobacteria
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What type of bacteria (gram pos or neg) have a thick peptidoglycan layer?
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Gram positives
The gram pos have 2 layers an inner cytoplasmic membrane and and outer thick peptidoglycan later The gram neg. have 3 layers an inner cytoplasmic membrane, a thin peptidoglycan layer and an outer membrane with LPS |
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These 6 bugs DO NOT gram stain well
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These
Rascals May Microscopically Lack Color T: Treponema (too thin to be visualized R: Rickettsia (Intracelllular parasite) M: Mycobateria (high lipid content cell wall requires acid fast stain) M: Mycoplasma (no cell wall) L: Legionella pneumophila (primarly intracellular) C: Chlamydia (intracellular parasite; lacks muramic acid in cell wall) |
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How do you visualize Treponemes?
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Darkfield microscopy and fluorescent antibody staining
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How do you visualize mycobacteria?
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Acid Fast
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How do you visualize Legionella?
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Silver Stain
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In a gram stain what color will gram pos org. turn?
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BLUE
"I'm positively BLUE over you!!" these org. willl absorb the crystal violet and hold onto it so the cell turns blue. |
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In a gram stain what color will a gram neg. org turn?
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RED
"No (negative) RED commies!!" the crystal violet is washed off by the alcohol and the cells absorb the safranin and appear red |
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What are the 4 steps to a gram stain
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1. pour on crystal violet stain (blue dye) and wait 60 sec.
2. Wash off w/ water and flood w/ iodine soln. Wait 60 sec. 3. Wash off w/ water and then "decolorize" w/ 95% alcohol 4. Finally, counter stain w/ safranin (red dye). wait 30 sec and wash off w/ water |
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What 4 bugs use Giemsa's stain?
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1. Borrelia
2. Plasmodium 3. Trypanosomes 4. Chlamydia |
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This type of stain will stain glycogen, mucopolysaccharides and is used to dx Whipples dz.
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PAS (periodic acid-Schiff)
"PASs the sugar" |
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what stain stains acid fast bacteria
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Ziehl-Neelsen
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What bug does the india ink stain?
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Cryptococcus neoformans
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what bugs stain with the silver stain
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Fungi (Pneumocystis)
Legionella |
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What media do we use to isolate H. influenzae?
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Chocolate agar w/ factors V (NAD) and X (hematin)
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We use the Thayer Martin media to isolate which specific organism?
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N. gonorrhoeae
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we use the Bordet-Gengou (potato) agar to isolate this organism
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B. pertussis
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what media do we use to isolate C. diphtheriae?
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Tellurite plate,
Loffler's media |
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what media do we use to isolate M. tuberculosis?
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Lowenstein-Jensen agar
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what organism can we isolate with Eaton's agar?
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M. pneumoniae
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What media do we use to isolate E. Coli?
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Eosin-methylene blue (EMB) agar (blue-black colonies with metallic sheen)
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How do we isolate Lactose-fermenting enterics?
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Pink colonies on MacConkey's agar (fermentation produces acid, turning plate pink)
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what media do we use to isolate Legionella?
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Charcoal yeast extract agar buffered with an increase in iron and cysteine
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what media do we use to isolate fungi?
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Sabouraud's agar
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What are Obligate Aerobes (including the gram pos, gram neg and the Acid fast org)
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Nagging Pests Must Breathe
(Nocardia Pseudomonas Aerginousa Mycobacterium Tuberculosis Bacillus) Gram Pos: Nocardia & Bacillus cereus Gram Neg: Neisseria, Psudomonas, Bordetella, Legionella, Brucella Acid Fast: Mycobacterium, Nocarida |
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these organisms use an O2 dependent system to generate ATP
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Obligate Aerobes
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This bacteria is seen in burn wounds, nosocomial pneumonia and pneumonias in cystic fibrosis patients. It is also an AERobe
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P. AERuginosa
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What are the 3 obligate Anaerobes?
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"anaerobes Can't Breathe Air"
C: Clostridium B: Baceroides A: Actinomyces Anaerobes lack catalase and/or superocide dismutase and are thus suscepible to oxidative damage. Generally foul smelling(short chain fatty acids), are difficult to culture and produce gas in tissue (CO2 and H2) |
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Where in the body are anaerobes considered normal flora?
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GI tract
everywhere else they are pathogenic |
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what antibiotics are ineffective against anaerobes?
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aminOglycosides b/c these antibiotics require O2 to enter the bacterial cell
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These two bugs can NOT make thier own ATP
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Rickettsia and Chlamydia
they are obligate intracellular bugs "stay inside (cells) when it is Really Cold" |
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what are the faculative intracellular bugs? (8)
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"Some Nasty Bugs May Live FacultativeLY"
S: Salmonella N: Neisseria B: Brucella M: Mycobacterium L: Listeria F: Francisella L: Legionella Y: Yersinia |
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These bacteria will give a positive Quellung reaction
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Encapsulated bacteria
If encapsulated bug is present, capsule swells when specific anticapsular antisera are added "Quellung = capsular swellung" "Some Killers Have Nice Shiny Bodies" S: Streptococcus pneumoniea, K: Klebsiella pneumonaie H: Haemophilus influenzae N: Neisseria meningitidis S: Salmonella B: B strep |
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How are capsules used in vaccines?
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They serve as antigen in vaccines
For vaccines w. polysaccharide capsule antigens , a protein is conjugated to polysacc. antigen to promote T Cell activation + subsequent class switching. A polysacc. antigen alone would not be recognized + presented by T cells (so only IgM abs would be produced) ie: Pneumovax, H. influenzae B, meningococcal vaccines |
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There are 4 Urease positive bacteria
"Particular Kinds Have Urease" |
P: Proteus
K: Klebsiella H: H. Pylori U: Ureaplasma |
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What color does Actinomyces Israelii produce?
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Yellow "Sulfur" Granules (which are composed of a mass of filatments + formed in pus)
"Israel has yellow sand" |
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This bacteria produces a yellow pigment
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S. aureus:
Aureus (Latin): Gold |
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What color pigment does Pseudomonas aeruginosa produce?
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Blue-green pigment:
AERUGula is green |
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What color pigment does Serratia marcescens produce?
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Red pigment
Serratia marcescens: think red maraschino cherries |
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What are Bacterial Virulence Factors?
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Protein A
IgA Protease M Protein |
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Protein A (S. Aureus)
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It binds the Fc region of Ig.
Prevents opsonization + phagocytosis. |
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IgA Protease
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Enzyme that cleaves IgA
Secreted by S. Pneumoniae, H. Influenzae Type B, Neisseria (SHiN) to colonize the respiratory mucosa. |
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M protein (Group A Streptococcus)
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Helps prevent phagocytosis
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Source of EXO-toxin
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Some Gram Positive + gram Negative Bacteria
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which is secreted from the cell?
Enodotoxin or Exotoxin? |
Exotoxin
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What is the chemistry of the EXOtoxin?
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Polypeptide
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where is the location of the genes of the EXOtoxin?
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in the plasmid or the bacteriophage
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Is the exotoxin or the endotoxin more toxic?
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the EXO-toxin has a HIGH toxicity (a fatal dose on the order of 1ug)
the ENDOtoxin has a low toxicity (fatal dose on the order of hundreds of micrograms) |
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toxoids are formed from endotoxin or exotoxin?
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exotoxin (toxoids are used as vaccines)
there are no toxoids formed and no vaccines available for the endotoxins |
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Are Exotoxins heat stable?
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No- they are destroyed rapidly at 60 Degrees Celcius.
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what are the typical diseases of the exotoxin?
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Tetanus, botulism, diphtheria
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where is ENDotoxin located?
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Outer cell membrane of most gram negative bacteria and Listeria
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What is the chemistry of the ENDOtoxin?
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Lipopolysaccharide (structural part of the bacteria; released when lysed)
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where is the location of the genes of the ENDOtoxin?
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in the bacterial chromosome
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What are the clinical effects of the endotoxin?
What is the mode of action? |
Fever, shock
TNF + IL-1 |
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which is more heat stable? Exotoxin or endotoxin?
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Endotoxin is stable at 100 deg. C for 1 hour.
the exotoxin is destroyed rapidly at 60 deg C (except staph enterotoxin) |
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what are the typical diseases of the endotoxin?
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Meningococcemia, sepsis by gram neg rods
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BUGS W/ EXOTOXINS
what is the function of a superantigen? |
Binds directly to MHC2 and T-cell receptor simultaneously, activating large numbers of T-cells to stimulate release of IFN-gamma and IL-2
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BUGS W/ EXOTOXINS
what are the two superantigens? |
1. S. aureus
2. S. pyogenes |
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BUGS W/ EXOTOXINS
what type of superantigen is S. aureus? |
TSST-1 superantigen that causes toxic shock syndrome (fever, rash, shock).
Other S. aureus toxins include enterotoxins that cause food poisoning as well as exfolitin, which causes staphylococcal scalded skin syndrome |
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BUGS W/ EXOTOXINS
This erythrogenic toxin causes toxic shock like syndrome (Scarlet Fever) |
S. pyogenes
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BUGS W/ EXOTOXINS
What are the 4 ADP ribosylating A-B toxins? |
1. Cornybacterium diptheriae
2. Vibrio Cholerae 3. E. Coli 4. Bordetella pertussis |
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BUGS W/ EXOTOXINS
What is the function of the ADP ribosylating A-B toxins? |
Interferes w/ host cell function.
B(binding) component binds to a receptor on the surface of the host cell, enabling endocytosis. A(active) component then attaches an ADP-ribosyl to a host cell protein (ADP ribosylation), altering protein function. |
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BUGS W/ EXOTOXINS
what is the function of the exotoxin of cornybacterium diphtheriae? |
It inactivates elongation factor (EF-2) (similar to pseudomonas exotoxin A); and causes pharyngitis and "psudomembrane" in the throat
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BUGS W/ EXOTOXINS
what is the function of the exotoxin of VIBRIO CHOLERAE? |
ADP ribosylation of G protein stimulates adenylyl cyclase; increase pumping of Chloride into gut and decrease Sodium absorption.
Water moves into the gut lumen; causes voluminous RICE-WATER DIARRHEA |
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BUGS W/ EXOTOXINS
what is the function of the exotoxin of E. COLI? |
Heat-labile toxin stimulates adenyly cyclase;
Heat stable toxin stimulates Guanylate cyclase. Both cause watery diarrhea. "Labile like the Air, stable like the Ground" |
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BUGS W/ EXOTOXINS
what is the function of the exotoxin of BORDETELLA PERTUSSIS? |
Increases cAMP by inhibiting G alpha i; causes WHOOPING COUGH;
inhibits chemokine receptor, causing lymphocytosis. |
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Clostridium Perfinges
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Alpha Toxin - a lechithinase that acts as a phospholipase to cleave cell membranes + cause Gas Gangrene
Double zone of hemolysis on Blood Agar. |
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C. Tetani
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blocks release of inhibitory Neurotransmitters GABA + Glycine --> LOCKJAW
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C. Botulinism
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blocks release of Ach, causes anticholinergic symptoms
CNS paralysis (esp. Cranial Nerves) spores in canned food or honey (cause Floppy Baby Syndrome) |
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Bacillus Antrhacis
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Edema Factor - part of the toxin complex is an adenylate cyclase
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Shigella
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Shiga toxin (also made by Ecoli 0157:H7)
cleaves host cell rRNA (inactivates 60S ribosome) Also enhances cytokine release --> HUS |
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S. Pyogenes
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Streptolysin O is a hemolysin.
Antigen for ASO ab, used in dx for Rheumatic Fever |
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What Bacteria are cAMP inducers?
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1) Vibrio Cholera
2) Pertussis Toxin 3) E.Coli (ETEC) 4) Bacillus Anthracis |
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How does Vibrio Cholera work?
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permanently activates Gs --> rice water diarrhea
(turns the ON (Stimulator)"on") |
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How does Pertussis Toxin work?
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permanent disables Gi --> Whooping Cough
(turns the OFF(inhibitor) "off") |
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How does Ecoli (ETEC) work?
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Heat Labile Toxin
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How does Bacillus Anthracis work + why is it different from Vibrio Cholera Pertussis, E.Coli?
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the toxin inculdes edema factor (which is an adenylate cyclase itself) --> increase cAMP
unlike cholera, Pertussis + E.Coli which act via ADP ribosylation to permanently activate Adenylate cylcase + inc. cAMP |
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What is an endotoxin?
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lipopolysaccharide found in the outer membrane of a Gram Neg. Bacteria.
N-dotoxin is integral part of gram-Negative outer membrane. Endotoxin is heat stable. |
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How does an endotoxin work?
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1) activates macrophages
- IL-1 -->Fever -TNF --> fever + hemorrhagic tissue necrosis -Nitric Oxide --> hypotension + shock 2) Activates complement -C3a --> hypotension + edema -C5a -->Neutrophil Chemotaxis 3) Activates Hageman Factor - Coagulation Cascade -->DIC |
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What are the phases of Bacterial Growth Curve?
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1) Lag (metabolic activity w.o division)
2) Log (rapid cell division) 3) Stationary (nutrient depletion + spore formation) 4) Death |
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Transformation/Competence
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ability to take up DNA from environment
feature of bacteria esp. (SHiN = S.pneumonia, H.Influenza, + neisseria) Any DNA can be used |
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Conjugation
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transfer of genetic material between bacterial cells by direct cell-to-cell contact or bridge like connection
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F+ X F-
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F+ plasmid contains genes required for conjugation process.
F- = bacteria without this plasmid Plasmid is replicated + transferred through pilus from F+ cell. ONLY Plasmid DNA is transferred + no transfer of chromosomal genes. |
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Hfr X F-
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Hfr cell = when F+ plasmid becomes incorporated into bacterial chromosomal DNA
replication of incorporated plasmid DNA may include flanking chromosomal DNA. Transfer of Plasmid + chromosomal DNA. |
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Transposition
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segment of DNA that can jump from 1 location to another (excision + reincorporation).
Can transfer genes from plasmid to chromosome + vice versa. Excision may include some flanking chromosomal DNA (which can be incorporated into a plasmid + transferred to another bacterium.) |
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Transduction
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process where foreign DNA is introduced into another cell by another virus.
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Generalized transduction
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"Packaging event"
Lytic Phage infects bacterium leading to cleavage of bacterial DNA + synthesis of viral proteins. Parts of bacterial chromosomal DNA may become packaged in viral capsid. Phage infects another bacterium transferring these genes. |
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Specialized transduction
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"Excision Event"
Lysogenic Phage infects bacterium + viral DNA is incorporated into bacterial chromsome. Phage DNA is excised + some chromosomal DNA may be excised with it. DNA is put into phage viral capsid + can infect another bacterium. |
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What are the 5 bacterial toxins encoded in a lysogenic Phage?
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"ABCDE"
ShigA-like Toxin Botulinism Toxin (certain strains) Cholera Toxin Diptheria Toxin Erythrogenic Toxin of Strep Pyogenes |
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What Gram Positive Cocci Stain Catalase Positive?
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Staphylococcus (need more Staph to make catalase)
(Strep. is catalase negative) |
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What Gram Positive Cocci is Coagulase Positive?
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Staph Aureus
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Novobiocin
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Identifies Staphylococci
"On the STAPH Retreat, there was NO StR-ES" Saphrophyticus is RESISTANT Epidermis is SENSITIVE |
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Optochin
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Identifies Streptococci
"OVRPS (overpass)" Viridans is RESISTANT Pneumoniae is SENSITIVE |
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Bacitracin
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Identifies Streptococci
"B-BRAS" Group B Strep is RESISTANT Group A Strep is SENSITIVE |
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A hemolytic Bacteria
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green ring around colonies on blood agar
Strep. Pneumonaie (Catalase Negative + Optochin SENSITIVE) Strep. Viridans (Catalase Negative + Optochin RESISTANT) |
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B Hemolytic Bacteria
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form clear area of hemolysis on blood agar.
Staph Aureus (Catalase Positive + Coagulase Positive) Strep. Pyogenes - Group A strep (Catalase Neg. + Bactracin SENSITIVE) Strep. Agalactiae- Group B strep (Catalase Negative + Bactracin RESISTANT) Listeria Monocytogenes (tumbling motility, meningitis in newborns + unpasteurized milk) |
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How does Catalase Work?
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enzyme that catalyzes degradation of H2O2
if H202 is not degraded it can be converted to microbicidal products (ie. damage the cell) |
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Why is catalase bad in pts w. Chronic Granulomatous Disease?
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catalase producing microbes degrade the small amount of H202 that is present --> recurrent infxns.
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Staph Aureus
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Protein A (virulence factor)binds Fc-IgG, inhibiting complement fixation + phagocytosis.
Results in: 1) Inflammatory Disease- (skin infxn, organ abscess, + pneumonia) 2) Toxin Mediated Disease (Toxic Shock Syndrome, Scalded Skin Syndrome, + Rapid Onset Food Poisoning- enterotoxin (pre formed toxin)) 3) MRSA (Methiccillin resistant Staph Aureus)- resistant to B Lactams due to altered penicillin binding protein. |
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Toxic Shock Syndrome Toxin
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superantigen that binds to MHCII + T cell receptor causing polyclonal T cell activation
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Staph Epidermis
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infects prostethic devices + catheters by producing adherent biofilms
component of normal skin flora; contaminates blood cultures |
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Streptococcus Pneumonaie
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Lancet shaped. Encapsulated. IgA Protease. Alpha hemolytic
- "MOPS" Most OPtochin Sensitive Most Common Cause of "MOPS" 1) Meningitis 2) Otitis Media (children) 3) Pneumonia 4)Sinusitis Assoc. w. rusty sputum, sepsis in Sickle cell + Splenectomy. |
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Viridans Streptococci
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Alpha hemolytic. Resistant to Optochin.
(live in the mouth bc they are not afraid of-the-chin) normal flora of oropharynx + cause dental caries (Stre. Mutans) + subacute Bacterial Endocarditis (S. sanguis) |
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Strep. Pyogenes
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Group A streptococci. Bactracin Sensitive. ASO titers detects infxn.
Abs against M Protein enhance host defenses against S. pyogenes but can cause RF. Results in: 1) Pyogenic - (pharyngitis, cellulitis, impetigo) 2) Toxigenic - (scarlet fever, toxic shock-like syndrome) 3)Immunologic - (RF, Acute Glomerulonephritis) |
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Strep. Agalactiae
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Group B Strep. Bactracin Resistant.
CAMP factor produced which increases the area of hemolysis by S. aureus. Colonizes vagina, causes pneumonia, meningitis + sepsis in babies. Produces CAMP factor Pregnant women: screened at 35-37 wks; + test will be given Intrapartum Peniciilin |
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Enterococci
(Group D Streptococci) |
normal colonic flora. Penicillin G resistant. Cause UTI + Subacute Endocarditis.
Lancefield Group D has both Enterococcus (hardier) + NonEnteroccocal group D Streptococci. VRE (Vancomycin-Resistant Enterococci)= impt cause of Nosocomial Infections |
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Lancefield group
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based on differences in the C carbohydrate on the bacterial cell wall.
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Strep Bovis
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colonizes the gut.
Cause bacteremia + subacute endocarditis in colon cancer pts. |
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Corynebacterium Diphtheria
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Potent exotoxin (encoded by B-prophage) inhibits protein synthesis by ADP ribosylation of EF-2
"ABCDEFG" A- ADP ribosylation B- Beta Prophage C-Corynebacterium D- Diptheria E-Elongation Factor 2 F- (Factor 2) G- Granules |
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Symptoms + Testing of Diptheria
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Pseudomembranous Pharyngitis (Gray-white membrane) w. lymphadenopathy.
Lab Diagnosis= gram+ rods w. metachromatic (Blue + red) granules |
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Vaccine for Diptheria
|
Toxoid Vaccine
|