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191 Cards in this Set
- Front
- Back
in transcription
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dna is copied to rna
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_______ is used to make complementary DNA from an mRNA template
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reverse transcriptase
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which of the following enzymes cuts double-stranded DNA at specific nucleotide sequences?
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restriction enzyme
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which of these is NOT a required component of a PCR rxn?
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primase
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the sequence of 16S RNA of _______ are conserved among all cellular organisms
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ribosomes
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start codon?
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AUG
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a unicellular organism that has 70s ribosomes and a peptidoglycan cell wall is
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bacteria
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figure 2.1, if base 4 is guanine what is base 4'?
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cytosine
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figure 2.1, if base 4 is guanine what is base 11'?
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guanine
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in the sci name Mycobacterium lepromatosis, mycobacterium is the name of the
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genus
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during the time of _____ period, infectious virions are virtually undetectable inside the infected cell.
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eclipse
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which of the following is not a method for classifying and identifying bacteria?
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none of these (PCR, serological, biochem, differential staining)
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which of the following is not true about scientific nomenclature?
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names vary with geographical location
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which of the following organisms lacks nucleus and has a thin peptidoglycan wall surrounded by an outer membrane
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proteobacteria
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_____ is an obligate intracellular parasite in the alphaproteobacteria
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rickettsia
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borrelia burgdorferii is known as a spirochete because it ...
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has an axial filament
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actinomycetes are gram + bacteria and differ from filamentous fungi because actinomycetes
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do not have a membrane bounded nucleus
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which of the following bacteria is not gram +?
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vibrio cholerae
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mycoplasmas differ from other bacteria because they
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lack a cell wall
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e. coli belongs to
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gram negative bacteria
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the viral genome can be
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double stranded DNA/RNA, negative/positive single stranded RNA (all of these)
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which of the following is not a common method of amplifying animal viruses?
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in synthetic culture media
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which of the following statements about viruses is not true?
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viruses have their own catabolic enzymes to synthesize ATP
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which of the following enzymes can be found in the viral particles of retroviruses?
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reverse transcriptase
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which of the following steps does not occur during multiplication of an influenza virus?
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synthesis of viral DNA
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cytopathic effect (CPE) usually refers to changes in host cells due to _____
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viral infections
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which of the following is not an obligate intracellular parasite?
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none of these : chalmydia, influenza virus, rickettsia, bacteria phage
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which of the following viruses is associated with cervical cancer in women?
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human papillomavirus
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sequencing of 16s RNA is commonly used for classification and identification of bacteria
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true
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KSHV is essential but not sufficient for causing Kaposi's sarcoma
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true
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herpesviruses usually establish life long latency in their hosts
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true
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influenza virus has a segmented RNA genome
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true
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viral capsids are usually symmetric and made of repeating protein subunits
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true
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some people are naturally resistant to HIV infection because they have mutations in CCR5 gene which encodes an essential coreceptor of the virus
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true
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in bacteria, gene expression is typically regulated by means of operons
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true
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polioviruses are enteric and transmitted through oral-fecal route b/c their viral envelopes help them survive the acidic environment in stomach of their hosts
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false
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all viruses have lipid bilayer envelopes
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false
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the genomic RNA of negative strand RNA viruses can be infectious
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false
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which of the following statements concerning transcription is true
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all types of RNA in the cell are synthesized by transcription, which uses a portion of DNA as a template for copying
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which of the following best describes the flow of information in cells?
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mRNA is made by copying specific regions of DNA called genes. Ribosomes use mRNA as instructions, which provide a code specifiying the order of A.A. in the protein
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which of the following is an example of horizontal gene transfer in bacteria?
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transduction, conjugation and transformation
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which of the following is a method of vertical gene transmission?
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cell division
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Frederick Griffith did experiments on genetic transformation. Which of the following statements about his experiments is accurate?
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Griffith found that DNA released from dead (virulent) bacteria entered live (avirulent) bacteria and changed them genetically, causing them to become virulent.
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Which of the following does NOT accurately apply to the Ames test?
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The Ames test is based on the observation that reversions CANNOT occur in mutant bacteria.
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Deleting or inserting one nucleotide pair in the middle of a gene is an example of which of the following?
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frameshift mutation
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In the figure, which colonies are streptomycin-resistant and leucine-requiring?
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4 and 8
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Transformation is the transfer of DNA from a donor to a recipient cell
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as naked DNA in solution.
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Genetic change in bacteria can be brought about by
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transformation.
conjugation. transduction. mutation. All of the answers are correct. |
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t Which of the following statements regarding a bacterium that is R+ is false?
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It is F+.
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In the figure, if base 4 is thymine, what is base 4'?
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adenine
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In the figure, if base 4 is thymine, what is base 11'?
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thymine
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In the figure, base 2 is attached to
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deoxyribose.
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The necessary ingredients for DNA synthesis can be mixed together in a test tube. The DNA polymerase is from Thermus aquaticus, and the template is from a human cell. The DNA synthesized would be most similar to
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human DNA
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Amino Acids Encoded by the Human p53 Gene
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nonsense
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If you knew the sequence of nucleotides within a gene, which one of the following could you determine with the most accuracy?
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the primary structure of the protein
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Which statement best describes restriction enzymes?
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They are important for cloning applications because they can be used to cut DNA at specific nucleotide sequences.
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Which of the following pairings of recombinant DNA techniques and applications does NOT match?
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gene silencing: production of subunit vaccines
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Why is baker's yeast useful for expressing genetically engineered genes?
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Yeast cells are eukaryotic and so would likely be successful in expressing eukaryotic genes.
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Which of the following methods could be used to identify the source of an outbreak?
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DNA fingerprinting
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Which of the following statements about recombinant DNA technology is FALSE?
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It has limited application because genes of interest cannot be moved from one type of cell to another.
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Which of the following applications of recombinant DNA technology is NOT controversial?
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metagenomics
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Scientists like to use fluorescent proteins for various types of recombinant DNA procedures. You have a very small amount of the gene for a fluorescent protein. You'd like to make a fluorescent bacterium (!). Which of the following represents the correct sequence of procedures that you would use?
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Amplify the gene using PCR.
Insert the gene into a plasmid vector. Transform the vector into the bacteria. |
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Which statement regarding agricultural biotechnology is FALSE?
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Agricultural biotechnology is extremely limited because foreign genes cannot be inserted into plant cells.
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How many pieces will EcoRI produce from the plasmid shown in the figure?
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2
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The reaction catalyzed by reverse transcriptase is
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mRNA → cDNA.
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Which of the following is an advantage of using E. coli to make a human gene product?
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Its genes are well known.
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Biotechnology involves the
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use of microorganisms to make desired products, the use of animal cells to make vaccines, and the development of disease-resistanct crop plants.
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The Human Genome Project, which was completed in 2003, was focused on
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determining the nucleotide sequence of the entire human genome.
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Place the following steps in the PCR procedure in the correct order:
1) Incubate at 94°C to denature DNA strands; 2) Incubate at 72°C for DNA synthesis; 3) Incubate at 60°C for primer hybridization. |
1, 3, 2
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A source of heat-stable DNA polymerase is
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Thermus aquaticus.
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The Pap test for cervical cancer involves microscopic examination of cervical cells for cancerous cells. A new, rapid diagnostic test to detect human papilloma virus (HPV) DNA before cancer develops is done without microscopic exam. The steps involved in this FastHPV test are listed below. What is the second step?
|
Add an RNA probe for HPV DNA.
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PCR can be used to identify an unknown bacterium because
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the RNA primer is specific.
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Restriction enzymes are
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bacterial enzymes that destroy phage DNA.
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Which statement regarding viral species is true?
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Viral species are not classified as part of any of the three domains.
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Numerical identification methods rely on a series of which kind of test to identify microorganisms?
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biochemical testing
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Consider a gram-negative human pathogen isolated from marine mammals. This pathogen is subjected to a series of tests and found to have the following characteristics: oxidase-positive; does not hydrolyze urea; produces indole; does not produce acetoin. Which of the following could it be?
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Pasteurella multocida
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Which technique is often used to determine the identity and abundance of microorganisms in an environment? (This technique is particularly useful because it does not require culture.)
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fluorescent in situ hybridization (FISH)
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Which of the following techniques could be used to identify antibodies produced by a patient?
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western blotting
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If two organisms have similar rRNA sequences, you can conclude that
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they evolved from a common ancestor.
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Which of the following is the best evidence for a three-domain system?
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Nucleotide sequences in ribosomal RNA vary between all three domains.
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Biochemical tests are used to determine
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enzymatic activities
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Which of the following is NOT based on nucleic-acid hybridization?
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Western blotting
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The phylogenetic classification of bacteria is based on
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rRNA sequences
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Which of the following statements is a reason for NOT classifying viruses in one of three
domains rather than in a fourth domain? |
Viruses are not composed of cells.
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Bacteria and Archaea are similar in which of the following?
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considered prokaryotic cells
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Serological testing is based on the fact that
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antibodies react specifically with an antigen.
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Nucleic acid hybridization is based on the fact that
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pairing between complementary bases occurs.
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Which of the following criteria is most useful in determining whether two organisms are related?
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both are gram positive
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In the figure, which figure shows the most closely related organisms?
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b
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You discovered a unicellular organism that lacks a nucleus and peptidoglycan. You suspect the organism is in the group
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archaea
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Into which group would you place a unicellular organism that has 70S ribosomes and a peptidoglycan cell wall?
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bacteria
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In the cladogram shown in the figure, which two organisms are most closely related?
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Micrococcus and Mycobacterium
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Which of the following characteristics indicates that two organisms are closely related?
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Both of their DNA can hybridize.
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Gram-positive organisms with low G + C content are commonly called __________.
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Firmicutes
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Which gammaproteobacteria are facultatively anaerobic, gram-negative rods that inhabit the intestinal tracts of humans and other animals?
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Enterobacteriales
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If a patient is diagnosed with a peptic ulcer, which genus of Proteobacteria is probably responsible?
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Helicobacter
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If a typhoid fever outbreak has occurred, which of the following statements is true?
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Salmonella is present, and the serovars may be differentiated by antigenic analysis.
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Regarding the order Rhizobiales of the class Alphaproteobacteria, which genus includes human pathogens?
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Brucella
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You have isolated a gram-positive bacterium with low G + C content. It was a contaminant in unpasteurized milk. It infected a pregnant woman, and now you are worried that her child will be stillborn. What bacterium is it?
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Listeria monocytogenes
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Which order or genus of Archaea are part of the microbiota of the human colon, vagina, and mouth?
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Methanobacteriales
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Blood agar would be the culture medium of choice if one were testing a patient for which of the following?
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scarlet fever
|
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Burkholderia was reclassified from the gammaproteobacteria to the betaproteobacteria because
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its rRNA sequence is similar to that of Neisseria.
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Thiobacillus oxidizes inorganic sulfur compounds and reduces CO2. This bacterium is a
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chemoautotroph.
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Salmonella, Shigella, Yersinia, and Serratia are all
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gram-negative facultatively anaerobic rods.
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Which of the following statements about the causative agent of Rocky Mountain spotted fever is FALSE?
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It is found in soil and water.
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Escherichia coli belongs to the
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proteobacteria.
|
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You have isolated a bacterium that grows in a medium containing only inorganic nutrients. Ammonia is oxidized to a nitrate ion. This bacterium is
|
chemoautotroph
|
|
Requirements for X and V factors are used to identify
|
Haemophilus
|
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Rickettsias differ from chlamydias in that rickettsias
|
require an arthropod for transmission.
|
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Which of the following is NOT an enteric?
|
Campylobacter
|
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Which of the following are found primarily in the intestines of humans?
|
facultatively anaerobic gram-negative rods
|
|
Mycoplasmas differ from other bacteria in that they
|
lack a cell wall
|
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Which one of the following does NOT belong with the others?
|
Staphylococcus
|
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You have isolated an aerobic gram-positive, endospore-forming bacterium that grows well on nutrient agar. To which of the following groups does it most likely belong?
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bacillales
|
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Actinomycetes differ from fungi in that actinomycetes
|
lack a membrane-bounded nucleus.
|
|
Streptomyces differs from Actinomyces because Streptomyces
|
is a strict aerobe.
|
|
Which of the following is the best reason to classify Streptococcus in the Lactobacillales?
|
rRNA sequences
|
|
Which of the following bacteria are responsible for more infections and more different kinds of infections?
|
Streptococcus
|
|
Which of the following bacteria is gram-positive?
|
Streptococcus
|
|
Which of the following lacks a cell wall?
|
Mycoplasma
|
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Staphylococcus and Streptococcus can be easily differentiated in a laboratory by which one of the following?
|
growth in high salt concentrations
|
|
Which of the following statements concerning viruses is true?
|
The "host range" for a virus is determined by the presence or absence of particular components on the surface of a host cell that are required for the virus to attach.
|
|
Which statement concerning viral structure is true?
|
Spikes are found on some viruses. They are very consistent in structure and can be used for identification.
|
|
Which of the following is true concerning a lysogenic viral replication cycle?
|
During lysogeny, the viral genome integrates into the host DNA, becoming a physical part of the chromosome.
|
|
Which of the following statements regarding latent viral infections is true?
|
Latent infections can persist for years in an individual without causing any symptoms.
|
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Which of the following is true regarding cultivation and isolation of animal viruses?
|
Diploid cell culture lines, developed from human embryos, are widely used for culturing viruses that require a human host.
|
|
Which of the following statements concerning prion diseases is true?
|
Normal host cellular prion proteins (PrPC) are converted into scrapie proteins (PrPSc).
|
|
Which of the following is true of viroids?
|
Viroids are short pieces of naked RNA.
|
|
Viruses are the only known infectious agents that are obligatory intracellular parasites.
|
False
|
|
Which of the following statements about viruses is FALSE?
|
Viruses use their own catabolic enzymes.
|
|
Which of the following statements provides the most significant support for the idea that viruses are nonliving chemicals?
|
They cannot reproduce themselves outside a host.
|
|
How do all viruses differ from bacteria?
|
Viruses are not composed of cells.
|
|
A segmented genome can result in antigenic shift.
|
True
|
|
Helical and icosahedral are terms used to describe the shapes of a virus envelope.
|
False
|
|
What contributes to antigenic shift in influenza viruses?
|
a segmented genome
|
|
Which of the following is NOT used as a criterion to classify viruses?
|
biochem tests
|
|
Which of the following statements about viral spikes is FALSE?
|
They are found only on nonenveloped viruses.
|
|
Binomial nomenclature is used to name viruses.
|
false
|
|
DNA made from an RNA template will be incorporated into the virus capsid of
|
Hepadnaviridae.
|
|
Viruses that utilize reverse transcriptase belong to the virus families
|
Hepadnaviridae and Retroviridae.
|
|
A viral species is a group of viruses that
|
has the same genetic information and ecological niche.
|
|
Continuous cell lines differ from primary cell lines in that
|
continuous cell lines can be maintained through an indefinite number of generations.
|
|
A clear area against a confluent "lawn" of bacteria is called a
|
plaque
|
|
Which of the following is NOT utilized to culture viruses?
|
culture media
|
|
Most drugs that interfere with viral multiplication also interfere with host cell function.
|
true
|
|
Positive sense RNA strands of viruses are treated like mRNA inside the host cell.
|
true
|
|
Most RNA viruses carry which of the following enzymes?
|
RNA-dependent RNA polymerase
|
|
Which one of the following steps does NOT occur during multiplication of a picornavirus?
|
synthesis of DNA
|
|
The following steps occur during multiplication of retroviruses. Which is the fourth step?
|
synthesis of double-stranded DNA
|
|
Which of the following places these items in the correct order for DNA-virus replication?
1. Maturation 2. DNA synthesis 3. Transcription 4. Translation |
2; 3; 4; 1
|
|
Generally, in an infection caused by a DNA-containing virus, the host animal cell supplies all of the following EXCEPT
|
DNA polymerase.
|
|
Bacteriophage replication differs from animal virus replication because only bacteriophage replication involves
|
injection of naked nucleic acid into the host cell.
|
|
Bacteriophages derive all of the following from the host cell EXCEPT
|
lysozyme
|
|
The mechanism whereby an enveloped virus leaves a host cell is called
|
budding.
|
|
Assume you have isolated an unknown virus. This virus has a single, positive sense strand of RNA, and possesses an envelope. To which group does it most likely belong?
|
togavirus
|
|
A viruss ability to infect an animal cell depends primarily upon the
|
presence of receptor sites on the cell membrane.
|
|
Which of the following statments is NOT true of lysogeny?
|
It causes lysis of host cells.
|
|
An envelope is acquired during which of the following steps?
|
release
|
|
Which of the following would be the first step in biosynthesis of a virus with a - (minus) strand of RNA?
|
synthesis of double-stranded RNA from an RNA template
|
|
Lysogeny can result in all of the following EXCEPT
|
immunity to reinfection by any phage.
|
|
Which of the following statements is FALSE?
|
The prophage makes the host cell immune to infection by other phages.
|
|
The definition of lysogeny is
|
phage DNA is incorporated into host cell DNA.
|
|
Oncogenic viruses
|
cause tumors to develop.
|
|
The most conclusive evidence that viruses cause cancers is provided by
|
cancer following injection of cell-free filtrates.
|
|
Assume a patient has influenza. During which time on the graph in the figure would the patient show the symptoms of the illness?
|
HIGHEST PEAK
|
|
Assume a patient had chickenpox (human herpesvirus 3) as a child. Which line on the graph in the figure would show the number of viruses present in this person as a 60-year-old with shingles (human herpesvirus 3)?
|
last peak
|
|
Some viruses, such as human herpesvirus 1, infect a cell without causing symptoms. These are called
|
latent viruses.
|
|
A lytic virus has infected a patient. Which of the following would best describe what is happening inside the patient?
|
The virus is causing the death of the infected cells in the patient.
|
|
An example of a latent viral infection is
|
cold sores.
|
|
A persistent infection is one in which
|
the disease process occurs gradually over a long period.
|
|
An infectious protein is a
|
prion
|
|
Which of the following is necessary for replication of a prion?
|
PrPSc
|
|
Which of the following prion diseases is found in deer and elk?
|
Chronic wasting disease
|
|
Which of the following prion diseases was also known as laughing disease?
|
Kuru
|
|
Which of the following conditions in humans is linked to bovine spongiform encephalopathy?
|
Variant Creutzfeldt-Jakob disease
|
|
What part of the nervous system is most affected by fatal familial insomnia?
|
Thalamus
|
|
Where does the name “scrapie” come from?
|
The prion disorder causes infected sheep to scrape against objects until their skin is raw.
|
|
Which of the following is most likely a product of an early gene?
|
DNA polymerase
|
|
Which virus is NOT associated with cancer?
|
coronavirus
|
|
Which statement is CORRECT concerning animal viruses?
|
Retroviruses use an enzyme called reverse transcriptase, which synthesizes DNA by copying RNA.
|
|
Which of the following is a human disease caused by prions?
|
Creutzfeldt-Jakob disease (CJD)
|
|
What are the three common means of horizontal gene transfer in bacteria (1 point) ?
Please explain each of them briefly (3 points). |
Conjugation is the transfer of genetic material between bacterial cells by direct cell-to-cell contact or by a bridge-like connection between two cells.
Transformation is a process in which cells directly uptake naked DNA from its surroundings. Transduction is the process by which DNA is transferred from one Bacterium to another by viruses. |
|
Use 4 examples to explain applications of biotechnology in medicine and/or agriculture
|
1) Transgenic plants (0.5 pt)
e.g. Pest resistance plants : Bacterial protein is toxic to insects, Clone Bt gene into crops. Expressed in leaves of plant, Kills only insects that feed on those crops (0.5 pt) 2) Use microbes to express genes, Produce eukaryotic proteins (0.5 pt) (enzyme) in large amounts e.g. Human insulin, interferon (0.5 pt) 3) Use microbial gene products (0.5 pt), Microbes have widest diversity of enzymes e.g. PCR depends on archaeal polymerases (0.5 pt) 4) Immunize against pathogens (HBV,HPV vaccine) (0.5 pt) e.g. Use genes from pathogens (subunit vaccines) (0.5 pt) Without exposure to pathogenic organism e.g. Nonpathogenic viruses carrying genes for pathogen's antigens as vaccines 5) Gene therapy (0.5 pt)to replace defective or missing genes (0.5 pt) |
|
Ti plasmid for making transgenic plants
|
Agrobacterium tumfaciens,
|
|
Peptic ulcer disease
|
Helicobacter pylori,
|
|
Opportunistic infections
|
HIV/AIDS,
|
|
Infectious mononucleosis (Kissing disease)
|
EBV (Epstein-Barr virus),
|
|
Chicken pox
|
Herpesvirus,
|
|
Genome replication involves reverse transcription
|
Hepatitis B virus,
|
|
Genome reassortment (antigenic shift)
|
Influenza virus,
|
|
Extra chromosomal self-replicating DNA
|
Plasmid,
|