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86 Cards in this Set

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ATCC
American Type Culture Collection


Antibiotic panels use these strains for quality control
Mycobacteria
- Acid fast bacteria
- Weakly gram (+) bc of thick mycolic fatty acids.
- Must use acid-fast stain.
- Ex. M. Tuberculosis.
Mycoplasma
- CANNOT gram stain.
- lacks cell wall.
- atypical pneumonia
- pleomorphic in appearance
- aka pleuropneumonia-like organisms.
Numbers of flora at different sites.
Mouth and Colon - 10^9
Small Intestine - 10^5-7
Stomach - 10^3-6
Skin - 10^3
Eye - 10^1-3
Indigenous bacteria on skin.
Stalph. Epidermidis - potential pathogen of bacteremia and endocarditis.
Indigenous bacteria in mouth.
- Strep
- Candida albicans (yeasts - white film)
- Anaerobes in crevices --> gram (-)
- Potential bacteremia (tooth extraction)
Indigenous bacteria in nose/nasopharynx.
- Strep pneumoniae
- H. influenzae
- N. meningitidis
- Stalph
- Alpha hemolytic strep.
Indigenous bacteria in respiratory tract.
NONE!!!
Helicobacter pylori
Microaerophilic
Responsible for gastric ulcers.
Indigenous bacteria in stomach.
There should be none. However, if illness or medication (omeprazole, H2 blockers) that raises gastric pH may allow colonization of H. pylori.
Which part of the small intestine is normally sterile?
Duodenum.
Indigenous bacteria in small intestine.
Mainly in ileum and jejunum...
Anaerobes
Candida albicans
Enterobacteriaceae (Facultative anerobes)
- Escherichia spp.,
- Klebsiella spp.,
- Serratia spp.,
- Enterobacter spp.
Indigenous bacteria in large intestine.
Indigenous flora help prevent colonization & infection by exogenous organisms such as Vibrio cholerae, Shigella spp. and Salmonella spp.
- Anaerobes > Facult. Anaerobes
- Enterococci
- Bacteriodes
- Clostridium difficile
Most antibiotic-resistant bacteria known.
Enterococci
Bacteria that can produce abscesses in nearly any organ
Bacteriodes
Indigenous bacteria in urogenital tract.
Lactobacilli, Enterococci, C. albicans, Clostridium perfringens.

Menstrual cycle affects flora.
Oral contraceptive alter population of Lactobacilli --> may cause overgrowth of C. albicans.
Clostridium difficile
Gram (+), anaerobe, spore forming

- Colitis
- Most common nosocomial GI infection following antibiotic use or hospitalization
- Antibiotic-associated diarrhea
CLSI
Clinical and Laboratory Standards Institute

Determine breakpoint.

Antimicrobial therapy objective
Least toxic
Most cost-effective
Most clinically appropriate
T/F. Direct susceptibility tests on body fluids are NOT recommended
True.
Standardized inoculum of broth microdilution tests.
1.5 x 10^5 CFU/ml
Standardized inoculum of broth macrodilution tests.
5 x 10^5 CFU/ml
Standardized inoculum of Kirby-Bauer tests.
1.5 x 10^8 organisms/ml
Broth Microdilution Tests Special Considerations
trailing: Heavy growth in wells, followed by greatly reduced growth. Common with sulfonamides, trimethoprim.

Skipped wells: repeat test
Standardized inoculum in agar dilution tests
10^4 CFU/ml
Reference method for antimicrobial susceptibility testing of anaerobes and Neisseria gonorrhoeae
Agar dilution tests.
Mechanism of Cellular Death Induced by Bactericidal Antibiotics
Increase TCA cycle
Increase ETC and Ox-Phox.
Increase ROS (superoxide)
Free Fe binds with oxygen to create hydroxyl radical --> damage membrane lipids, proteins, and DNA.
Plasmids
- circular, dsDNA.
- parasitic/symbiotic relationshipw with host cell.
- role in antibiotic resistance.
selfish DNA
Transposons - act in its own self interest.
Transposons vs. Integrons
Transposons: large DNA

Integrons: smaller DNA; aka "gene cassette" containing genes that induce drug resistance to the bacterial cell.
"Acute" Vaccines
Small molecules that block "Multiple Adaptational Response" operon (MAR operon)...a master switch to control protein expression.
Basic structure of penicillin
Thiazolidine ring fused to a Beta lactam ring with a variable side chain R group attached through an amide bond from the B-lactam ring.
Site of action of penicillinase?
Beta-lactam ring.
Another word for penicillinase?
Beta-lactamase.
Name two natural penicillins.
Penicillin G and Penicillin V.
Name 3 types of semisynthetic penicillin.
- Antistaphylococcal
- Aminopenicillin
- Extended Spectrum penicillins
Antistaphyloccal Penicillin
- Penicillinase resistant.
- Dicloxacillin
- Oxacillin
- Cloxacillin
- Nafcillin
- Methicillin (too toxic for clin. use)
- Not substitutes for Pen G in diseases susceptible to Pen G.
- Mainly for staph infections.
- NOT for Gnegs, atypicals, or anerobes.
- About half of dose eliminated by renal system, so generally do not require dose adjustment in renal failure
- Dicloxacillin
- Oxacillin
- Cloxacillin
- Nafcillin
- Methicillin
Antistaphylococcal Penicillin (Penicillinase resistant)
Aminopenicillins
- ampicillin and amoxacillin
- amino R group that increases lipid solubility.
- broader spectrum of activity than natural penicillins.
- Amoxicillin greater bioavailability than ampicillin.
- NOT penicillinase resistant.

- HELPS Enterococcus
- Haemophilus influenzae
- E. coli
- Listeria
- Proteus
- Spirochetes/Streptococcus
- Gpos and Gneg anaerobes (not C. difficile)
- not active on Pseudomonas or atypical organisms.
Ampicillin and amoxacillin
Aminopenicillins
Aminopenicillin/β-lactamase Inhibitor Combinations
ampicillin/sulbactam or amoxicillin/clavulanate
ampicillin/sulbactam or amoxicillin/clavulanate
Aminopenicillin/β-lactamase Inhibitor Combinations
Extended Spectrum Penicillins
- Largest R side chains that increase penetration via porins into gram (-) organisms.
- Less sensitive to B-lactamase.
- aka antipseudomonal penicillins
- most active against Pseudomonas aerguinosa.
- carbenicillin, ticarcillin (2nd best), mezlocillin and piperacillin (best).
- poor oral absorption
Carbenicillin
A
Mezlocillin
Piperacillin.
Ticarcillin
Extended spectrum penicillins.
piperacillin/tazobactam or ticarcillin/clavulanate
Extended Spectrum Penicillin/ β-lactamase Inhibitor Combinations
Which kind of penicillin works best against Pseudomonas?
Extended spectrum penicillins.
Two molecules used to form bacterial peptidoglycans
N-Acetylglucosamine and N-Acetylmuramic acid.

Only the NAM units have peptides hanging down
What enzyme mediates a cross-linking rxn that strengthens the cell wall?
glycopeptide transpeptidase

Penicillin blocks this step through formation of suicide inhibitor complex with the enzyme.
MOA of penicillin
Penicillin beta lactam ring binds to and competitively inhibits the transpeptidase enzyme (AKA penicillin-binding protein)
t/f. glycopeptide transpeptidase is a penicillin binding protein.
True.
Do penicillins work on mycobacteria, protozoa, fungi, or viruses?
No due to lack of cell wall.
Penicillin's structure resembles what sequence of the native bacterial glycopeptide?
D Ala - D Ala dipeptide.
What is the key AA residue in the glycopeptide transpeptidase enzyme that forms a covalent bond to the opened B-lacta ring of penicillin and causes the cross linking rxn to stop?
Serine.
Mechanisms of Resistance to Penicillins - The 6 P's.
Penetration
Porins (outher membrane)
Pumps
Penicillinase
Penicillin Binding Proteins
Peptidoglycan
Bacteria targeted by natural penicillins.
CESS

- C. perfringens - Gpos anaerobes (not difficile)
- Enterococci (Gpos)
- Spirochetes (syphilis)
- Streptococci (Gpos)

- gram (+): Listeria
- gram (-): Neisseria
- NOT gram (-) anaerobes
Spectrum activity of natural penicillins
Gpos: work well
Gneg: not as well; depend on outer membrane porins.

Don't work for intracellular organisms.
Absorption of Penicillin G
LOW oral absorption.
Only IV/IM routes.
Absorption of Penicillin V
Better oral stability and absorption.
Distribution of penicillins
- mostly ECF
- 60% bound to proteins.

-Poor penetration to CNS (however, inflamed meninges are more permeable to penicillin...thus more penicillin in serum on first day of treatment)
Excretion of penicillins
- Fairly rapid
- t1/2 = 30 - 60min
- eliminated by kidney
- PROBENECID can block active secrtion.
- Renal failure can elevate t1/2.
- require dose adjustment.
Adverse rxns of penicillins
hypersensitivity (Rash)
diarrhea
neurotoxicity (rare)
Structure of Cephalosporins
Similar to Penicillin
However, 2 R chains

R1 - antibacterial activity
R2 - PK and metabolism
MOA of Cephalosporins
Similar to penicillins
Inhibit last step of cell wall synthesis (transpeptidation)
Cephalosporins don't work on what organisms?
methicillin-resistant S. aureus (MRSA) or methicillin-resistant enterococcus
2 advantages of cephalosporins over penicillins
1. more resistance to B-lactamases
2. two R sites
1st gen cephalosporin
Dr FAZ and FAD did PHD in 1st class

CeFAZolin
CeFADroxil
CePHalexin
CePHradine
Spectrum of activity and uses for 1st gen cephalosporin.
- potential sub. for Pen G.
- Susceptible against Gneg (PEck)
- Proteus, E. coli, Klebsiella
- Not active against intracellular bacterias nor anaerobes.
- Used for skin and soft tissue infections and surgical prophylaxis.
2nd gen cephalosporin
The FACtory CAR PRObably ran over FUR.

CeFAClor
LoraCARbef
CefPROzil
CeFURoxime
Spectrum of activity and uses for 2nd gen cephalosporin.
- True cephalosporins
- No activity on anaerobes or atypicals.
- Target 3 more Gneg organisms in addition to PeCK.
- HENPeCK
- Haemophilus
- Enterobacter
- Neisseria
- Proteus
- E. coli
- c
- Klebsiella
- Used to treat respiratory infections.
Cephamycins
- Subgroup of 2nd gen cephs
- Methoxy group on B-lactam ring.
- limited activity against Gpos
- Parenterally ONLY.
- some anaerobic and falc. Gneg infections can be treated due to methoxy group

XITIN TETAN

CefoXITIN
CefoTETAN.
Spectrum of activity and uses of 3rd gen cephalosporins.
- Enhanced activity against Gneg bacteria. (HENPEcK)
- Weaker Gpos activity than 1st gen.
- Cefotaxime/Ceftriaxone - strep pneumo.
- Ceftriaxone - 1/day
- Ceftizoxime - anaerobes
- Ceftazidime - Pseudomonas
- Cefdinir, Cefixime

May suffer from susceptibility to the inducible β-lactamases of Enterobacter, Citrobacter, Providencia, Morganella and Serratia. Use 2nd gen first.

Cephalosporins May Prove Sub-Efficacious
Ceftazidime
- 3rd gen Cephalosporins.
- PARENTERALLY
- 95% renal excretion (dose adjustment required)
- Increased activity against Pseudomonal, but decreased Stalph/Strep efficacy.
- Not active on anaerobes or atypical.
Ceftriaxone
3rd gen cephalosporin
1/day
strep pneumo
Cefotaxime
3rd gen cephalosporin
strep pneumo
Ceftizoxime
3rd gen cephalosporin
Gpos and Gneg anaerobes
Spectrum of activity and uses of 4th gen cephalosporins
- modified R2.
- Extended spectrum of activity against Gpos and Gneg.
- Greater resistance to B-lactamase.
- PARENTERALLY
- Not active against MRSA, anaerobe, or atypical.
- Cefepime - pseudomonas, strep, and nosocomial infections.
Cefepime
4th gen. cephalosporin
Pseudomonas, Strep, and nosocomial infections.
Adverse rxns to cephs
Hypersensitivity, RASH
Nephrotoxicity (if combined with aminoglycosides)
Diarrhea - possibility of C. difficile overgrowth.
Ceftobiprole
- 5th gen ceph.
- Activity against MRSA, penicillin resistant Strep pnemuo, Pseudomonas, and Enterococci.
- No activity on anaerobes.
- PARENTERALLY.
Bacteroides
Gneg Anaerobes
Clostridium
Gpos Anaerobes
Peptococcus & Peptostreptococcus
Gpos anaerobes
Stalph
Strep
Enterococcus
Listeria
Bacillus
Gpos bugs
HENPeCK

Haemophilus
E.coli
Neiseria
Proteus
Enterobacter
c
Klebsiella

Morganella, Shigella, Serratia, Citrobacter, Salmonella, Providencia, Campylobacter, Helicobacter, Bordetella, Vibrio
Gneg bugs
Acid-fast staining bugs
Mycobacteria
Nocardia
Chlamydia species
Mycoplasma species
Legionella pneumophila
Brucella species (G-)
Francisella tularensis (G-)
Rikettsia species (G- like)
Mycobacteria
Atypical bugs.
5th gen Ceph
Ceftobiprole