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150 Cards in this Set

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How do we stain bacteria with thick waxy cell walls?
Ziehl-Neelsen AKA acid fast stain = uses heat and acid to drive stain into bacteria

-good for Mycobacterium tuberculosis
What is India ink used for?
Cryptococcus

Used for negative staining = everything else but the organism is stained black
What is Giemsa stain used for?
General stain for Blood Smears
What does PAS AKA periodic acid-schiff stain test for?
polysaccharides, such as glycogen and mucopolysaccharides
Prussian blue tests for what?
Detects iron presence
Congo Red stains what?
Amyloid red

but looks apple green when viewed under a polarized microscope
Gram + bacteria have thick or thin cell walls?
thick peptidoglycan walls
What are the steps in staining Gram + and - bacteria?
1. Crystal violet - stains walls blue/purple
2. Gram's Iodine - ensures stain doesn't wash off
3. Alcohol - Decolorizes = washes out stain
4. Safranin - stains pink/red...if bact is gram + thick wall, not all the blue/violet stain washes out, so mized with safranin bact. will appear blue-violet, vs gram - will appear pink/red
T/F: All bacteria except mycoplasma have a cell wall
TRUE
T/F: All bacteria except mycoplasms and chlamydia have peptidoglycan in cell wall
TRUE
T/F: All gram positive bact. have a thick peptidoglycan wall and techoic acid (=antigen our bodies can detect)
TRUE
Outer membrane of all Gram - bact. contains what?
Lipopolysaccharide (LPS) = a component of LPS is lipid A

The outer membrane has porins
T/F: The O specific side chain, "O Ag" of LPS is only found in Gram - bact.
TRUE
What are the structures that make up the LPS?
O specific side chain, Core polysaccharide, Lipid A
What part of the LPS makes Endotoxin?
Lipid A
T/F: mycobacteria have waxy well walls containing mycolic acid
T
T/F: Mycoplasma have no cell wall, just a membrane with cholesterol
T
Define Spores
Contain dipicolinic acid (=dehydrates the spore) and can survive for thousands of years.
Endotoxin A ie Lipid A of the LPS activates what?
Macrophages --> IL-1, TNF, NO --> fever

Complement --> alternate pathway --> C3a and C5a --> inc histamine --> dec BP and exudation

Hageman (factor 12) --> coagulation --> consumption of clotting components --> DIC
Differences between Endotoxin and Exotixin?
Endotoxin = Lipid A of the LPA, POOR antigen (b/c its not a protein, its a lipid), Heat stable b/c its not a protein

Exotoxin = polypeptide = its a protein, specific in its effect, very antigenic b/c its a protein, heat labile (heat can destroy it)
Define Tetanus toxin
Produced by Clostridium tetani, Blocks glycine and GABA release (inhibitory NTs)

Muscle spasms result

Features tetany with lock jaw, risus sardonicus (facial muscle tetany), opisthotonus, paralysis of respiratory muscles
Define Botulinum Toxin
The MOST POTENT exotoxin

Produced by Clostridium botulinum
How does the muscle affects seen with tetanus toxin differ from botulinum?
tatanus toxis causes tetany (muscle spasm)

Botulinum causes muscle paralysis = blocks Ach at NM junction

Constipation, descending flaccid paralysis, flaccid paralysis of respiratory muscles
Define Diptheria toxin?
Inhibits protein synth in human cells

Produced by Corynebacterium diptheria
How does Diptheria toxin work?
inhibits protein synth by modifying elongation factor 2 (EF-2)
What does Diptheria toxin affect first?
throat, then binds heart and neural tissue

Features: pharyngeal pseudomembrane development + myocarditis with arrhythmias, life-threatening circulatory collapse, muscle weakness or paralysis of pharyngeal muscles leading to regurgitation of fluids through nose + peripheral neurtitis/ neuropathy
Define Alpha toxin
Produced by: Clostridium perfringens and Staph. aureus

C. perfringens = Digests lecithin --> holes in cell membrane --> marked necrosis or deep tissues, esp muscles and hemolysis

Staph. aureus = creates holes in cell membrane --> marked necrosis of skin and hemolysis
Toxic Shock Syndrome Toxin works how?
Binds class II MHC proteins (HLA) directly, without intracellular processing --> means its a Super Antigen
What produces Toxic Shock Syndrome Toxin? Symptoms?
staph aureus

Symptoms = fever, rash, desquamation, diarrhea, Hypotension then shock
Define cholera toxin
Produced by vibrio cholera

Binds glycosides in intestinal cell membrane --> stimulate Gs protein --> adenylate cyclase stimulated --> over-production of cAMP --> secretion of chloride ion and water --> massive watery diarrhea
Define pertussis toxin
Produced by Bordatella pertussis. Toxin binds ciliated respiratory tract epi cells and lymphocytes --> inhibits Gi --> Adenylate cyclase stimulated --> over-production of cAMP
Wha tare the two types of Enterotoxin produced by E. coli?
Heat Labile (same MOA as cholera)

Heat Stabile - water drawn into lumen by attraction to excess ions in lumen
Whats the oxygen requirement of microaerophilics?
have NO oxygen requirement - rely on fermentation for metabolism

Have superoxide dismutase
T/F: Obligate Anaerobes will die upon exposure to oxygen
TRUE
Most common cause of exudative tonsillitis?
viruses (#1 of EBV)
Most common cause of Rhinitis?
Rhinovirus
Most common cause of Acute Sinusitis?
viruses, strep. pneumo
Most common cause of Otitis media?
strep. pneumo, H. influensae
Most common cause of malignant otitis externa?
Pseudomonas aeruginosa
Most common cause of acute bronchitis?
rhinovirus
Most common cause of Nosocomial (hospital-acquired) pneumonia?
E. coli
Most common cause of nursing home pneumonia?
Klebsiella pneumo.
Most common cause of ICU pneumonia?
Pseudomonas aeruginosa
Most common cause of Atypical pneumonia?
Mycoplasma pneumonia
Most common cause of community-acquired pneumonia?
Strep. pneumo.
Most common cause of UTI?
E. coli
Most common cause of infections of burn pts?
Pseudomonas aeruginosa
Most common cause of bacterial meningitis neonate? child? adult? immunocompromised?
Neonate = E. coli, strep agalactiae, listeria monocytogenes
Child = Neisseria meningitidis
Adult = strep. pneumo.
Immunocompromised = strep. pneumonia
Most common cause of Aseptic meningitis?
Summer = enterovirus
Winter = mumps virus
Most common cause of Diarrhea acute infections in kids, adults, bloody, parasitic? Chronic? + stool WBCs? - stool WBCs? food-associated?
kids = rotavirus
Adults = norwalk virus
bloody = campylobacter jejuni
parasitic = entamoeba histolytica
Chronic = Giardia lamblia
+ stool WBCs = Camplylobacter jejuni
- stool WBCs = Norovirus and rotavirus
food-associated = Salmonella enteritidis
What are all the different types of Diarrhea caused by E. coli?
ETEC, EIEC, EAEC, EHEC (including E.coli 0157), EPEC
Differences between E. coli-derived Diarrheas?
ETEC = enterotoxigenic. secretes LT and ST --> high chloride loss and blocks ions moving into enterocytes --> severe watery diarrhea. Traveler's diarrhea (fecal-oral route)

EIEC = enteroinvasive. invades enterocytes --> fever, WBCs in stool, bloody diarrhea, leukocytosis. (fecal-oral route)

EAEC = enteroaggressive. toxin causes watery diarrhea. stacked brick appearance in cultures. (fecal-oral route)

EHEC = enterohemorrhagic. secretes shiga-like toxin --> death of enterocytes --> bloody diarrhea, abd cramps, hemorrhagic colitis (from ground beef, etc)
A pt ingests e. coli 0157. What will they're symptoms be?
This is a EHEC.

Will cause non-immune hemolytic anemia, thrombocytopenia and acute renal failure (with uremia) --> Hemolytic Uremic Syndrome

EPEC = enteropathogenic. adheres to bowel wal but doesn't enter --> severe watery diarrhea that occurs in kids almost exclusively under 2 years old (fecal-oral)
Staph. aureus enterotoxin A-F is responsible for what symptoms?
Its a preformed toxin responsible for staph. a. food poisoning. Stimulates peristalsis causing diarrhea and abd. pain
What symptoms does Toxic Shock Syndrome Toxin cause?
N, V, watery diarrhea, may damage liver, kidney, CNS, muscle, blood cells, red rash occurs
What toxin is responsible for scalded skin syndrome?
Exfoliatin toxin

causes fever, bullae, and red macular rash --> middle epidermis of skin is cleaved, causing large areas of skin on palms and soles to slough off along with loss of fluids and electrolytes. hair and nails may also slough off.
What are the actions and result of Alpha toxin?
Forms pores in cell membranes --> cellular death and tissue necrosis --> skin necrosis and hemolytic anemia
Strep. agalctiae (Group B step) causes what?
Sepsis or meningitis in neonate
Strep. pyogenes (Group A strep) causes what?
Pharyngitis, tonsillitis, impetigo, scarlet fever, post-strep glomerulonephritis, acute rheumatic fever, necrotizing fasciitis, cellulitis/skin infections
Strep. bovis (Group D strep) causes what?
Sub-acute infective endocarditis

Check for colon cancer if pt has this
Enterococcus faecalis (Group D strep) causes what?
UTI, endocarditis, cholecystitis, ascending cholangitis
Strep mutans causes what?
Subacute infective endocarditis
What are the 3 possible diseases Group A beta-hemolytic strep causes?
Pyogenic disease --> purulent lesions
Toxigenic disease --> high fever with hypotension, necrotizing fasciitis, scarlet fever, tissue necrosis
Immunologic disease --> rheumatic fever with rheumatic heart disease or post-streptococcal glomerulonephritis
What are all the exotoxins Group A beta hemolytic strep can cause?
Streptokinase, Streptodornase, Hyaluronidase, Eythrogenic toxin, Streptolysin O, Streptolysin S, Pyrogenic exotoxin A, Exotoxin B
Define Streptokinase and Streptodornase, Exotxins
Streptokinase = activates plasminogen --> dissolves clot
Streptodornase = DNAse = degrades DNA
Hyaluronidase and Erythrogenic toxin do what?
Hyaluronidase = contributes to development of cellulitis

Erythrogenic toxin - causes rash of scarlet fever. fever, rough, erythramatous diffuse rash, strawberry tongue, focal streptococcal infection
Which exotoxin is responsible for the flesh eating bateria that causes necrotixing fasciitis?
Exotoxin B
Where must we culture Neisseria?
Chocolate medium
Define Meningococcus
Neisseria meningitidis. IgA protease = destroys IgA Abs on mucosal surfaces

Encapsulated = confers anti-phagocytic qualities and induces protective Abs

LPS causes fever and shock and launches DIC mechanisms.

Waterhouse-Friendrichson syndrome can occur (fever, cyanosis, petechiae, bilateral adrenal hemorrhage)
Define Gonococcus
Neisseria gonorrheae

IgA protease

NOT encapsulated = more easily phagocytosed but no protective Ab development

Purulent urethral or vaginal discharge
Untreated PID can lead to what?
Fitz-Hugh-Curtis syndrome = RUQ abd pain, +/- fever, violin-string adhesions from liver to adnexa or abd. wall
What are the outcomes of systemic spread of gonococcus?
gonococcal arthritis (monoarticular, red, hot, purulent)

Tenosynovitis (inflamm of tendon sheath)
Define Bacillus anthracis
Spores persist for many years in soil

produces anthrax toxin with 3 components: Edema factor, protective antigen (forms pores in cell membrane, antigenic), lethal factor
What are the 3 types of anthrax?
Cutaneous anthrax = most common form. black crust (eschar) with massive local edema

Pulmonary antrhax AKA woolsorter's dis. Spores inhaled --> germinate --> cough, fever, malase --> hemorhagic mediastinitis = mediastinal widening on x-ray, bloody effusion --> death

Gastrointestinal anthrax = Spores ingested and germinate --> vomiting, abd pain, bloody diarrhea --> shock, death (from contaminated meat)
DOC for Anthrax?
Penicillin (ONLY if its proven sensitive to it...until then use Ciprofloxacin or Doxycyclin PLUS clindamycin and or Rifampin and continue until penicillin is confirmed to work
Do you excise the lesion caused by anthrax?
NO! this will enable it to spread to systemic system
Define Corynebacterium diptheriae
Produces diptheria toxin but only if it itself is infected with a bacteriophage

Signs and Symptoms = pseudomembrane in throat, fever, myocarditis, paralysis and posible death

CHINESE CHARACTER formation (Listeria monocytogens has this too)
Listeria monocytogenes affects primarily who?
neonates, immunosuppressed, preggos

Look for CHINESE CHARACTERS, but dif. from Corynebacterium because its movement is tumbling
Affects of Listeria monocytogenes?
Sepsis and meningitis is new borns, abortion or premature delivery in preggos, or gastroenteritis in anyone w/o optimal immune system

Source = hot dogs/processed meats, unpasteurized dairy
Which Clostridium species cause gas gangrene and food poisoning?
Clostridium perfrongens
Which Clostridium species causes pseudomembraneous colitis?
Clostridium difficile
What bact. cause dental caries and protects the GI tract and vagina by maintaining an acidic environment
Lactobacillus
Characteristics of Clostridia?
Obligate Anaerobes, form spores, exotoxins responsible for disease, Gram + rods
Pathogenesis of C. perfringens?
spored germinate in food --> ingested --> enterotoxin produced --> Food poisoning (Diarrhea etc)
Pathogenesis of gas gangrene associated with c. perfringens?
spores inoculated into deep wounds --> spores germinate --> bact multiply in tissue --> bact. elaborate alpha toxin --> gas gangrene
Pathogenesis of C. difficile?
causes peeudomembraneous colitis

Abx use --> bact overgrowth in bowel of C. Dificile --> bacterial endotoxins A and B --> Destruction of enterocytes actin by toxin B --> Enterocyte death --> Pseudomembraneous colitis = foul smelling, watery diarrhea
How do we Dx C. dificile? Tx?
with the c. dificile toxin, NOT the stool culture

Tx = withdrawal of Abx. If severe, metronidazole or vancomycin+ cholestyramine
Pathogenesis of C. botulinum?
Spores germinate in canned food --> bacteria multiple, produce gas a botulinum toxin --> food and pre-formed toxin ingested --> toxin blocks Ach release at NM junction --> Botulism (flacid paralysis)
What are the 3 major forms of botulism?
1. Botulism = regular. acquired from canned foods
2. wound botulism = spores germinate in wound
3. Infant botulism = spres in honey ingested by infants
Pathogenesis of C. tetani?
Spores enter via deep wound --> spores germinate in anoxic tissue, create tetanospasmin = blocks release in inhibitory NTs in spinal cord --> tetanus
All Gram negative bact. have what?
O antigen
All flagellated bact. have what?
H antigen
All capsulated bact. have what?
K antigen
Difference between salmonella food infection and enteric fever (typhoid fever)?
Salmonella = poultry --> incubation 1-2 days --> bact invade epi, sm intestine and colon --> causes inflamm diarrhea --> bacteremia --> Tx = fluids if mild, Cirpo if severe

Enteric Fever (typhoid fever) = fecal-oral route bact ingested --> incubation 10-12 days --> bact multiply in peyers patches --> affect small intestine --> constipation, fever, brady, rose spots on abdomen --> progresses to chronic infection with gallbladder, excretion of bact in stool--> tx = ciprofloxacin or levofloxacin
Shigella - low or high infectious dose needed?
low
Bacteria are ingested by one of te 5 F's. What are they?
Fingers, Food, Flies, Feces, Fornication, anal
Does shigella invade the distal ileum and colon?
yep

fever, abd cramps, bloody mucusy diarrhea, stool WBCs

no bacteremia, so will not cause + blood culture
Proteus causes what?
staghorn renal calculi
Currant jelly sputum clues you into the fact that the pt is prob infected with what?
Klebsiella pneumoniae
Vibrio cholerae increases chloride and water into intestinal lumen to create what type of Diarrhea?
rice water diarrhea --> electrolyte and volume loss leading to arrhythmia and rapid acute renal failure
Tx = PO and IV fluids
Vibrio parahaemolyticus is transmitted how?
raw or undercooked seafood, esp shellfish and oysters
Which bact is Associated with the development of Guillain-Barre syndrome?
Campylobacter jejuni = Invasive, causes watery, foul-smelling diarrhea, fever, severe abd pain
What does the Urease of Helicobacter pylori do?
Splits urea into NH3 and CO2

ID with urease breath test, gram stain smear, H. pylori antigen in stool/serum
Whats the only gram neg that doesn't have LPS?
Bacteroides fragilis
Whats the most common cause of serious anaerobic infections?
Bacteroides fragilis
Whats the cause of black death?
Yersinia pestis
How is the bubonic plague transmitted vs Pulmonary plague?
Bubonic = rodents --> fleas --> humans

Pulmonary plague = human--> human or bio-warfare aerosol or bubonic plague
DOC for the plague?
Streptomycin
T/F: Yersinia enterocolitica has a very high infective dose and you can get it from puppies (poop).
TRUE
How does one acquire Pasturella multocida?
cat and dog bites

would infections and cellulitis result
Brucella is associated with what?
Unpasteurized dairy products
Pathogensis of Francisella tularensis?
rabbits, deer, squirrel --> ticks, flies, mosquitoes --> humans --> Tularemia, Tularemia pneumonia

If acquired via skin, ulcer develops at bite site, then granuloma forms
Describe Pseudomonas aeruginosa
Obligate anaerobe, oxidase +, slime layer +, colonizes lungs of most CF pts.
What does Pseudomonas aeruginosa cause?
osteomyelitis in IV drug users, infection in burn pts, pneumonia in CF pts, malignant otitis externa
Describe Hemophilus
produces IgA protease = destroys IgA, gram - pleomorphic rod, requires blood, grows around staphylococci
Which Haemophilus can cause chancres?
H. ducreyi
Why is the Hib vaccine so effective in preventing meningitis?
95% of Hemphilus have a capsule
Cause of whooping cough?
Bordatella pertussis

Gram - rod, produces pertussis toxin,
What are the stages of pertussis?
Catarrhal stage (1-2 weeks) rhinorrhea, malaise, fever, URI --> Coughing Stage (2-4 weeks) severe episodes every day, LRI --> Convalescent Stage (several months), mild cough --> 1/3 Recover Fully (1/3 have neuro problems, and 1/.3 of these have SEVERE neuro problems like coma, seizure, blindness, paralysis)
Describe Legionella pneumophila
Gram - rod, facultative intracellular parasite, causes Legionnaire's disease (fever, brady, pneumonia, diarrhea, hyponatremia) and Pontiac fever (like legionnaire's but w/ milder symptoms + bronchitis and loose stool).

Catalase +

Grows in man-made water reservoirs
How do we detect primary or latent TB?
PPD test
What often causes a positive PPD test?
QuantiFERON-TB = whole blood interferon gamma
Symptoms of primary TB?
Asymptomatic, Demonstrates primary lesion (Ghon complex, Ranke complex)

Ghon complex = Ghon focus with calcified tubercles in middle or lower lung and perihilar lymph node calcified granulomas

Yields + PPD
How do we Dx Secondary TB, which occurs after the primary TB infection and then the Latent period?
Lesions and cavity formation in upper lung lobes
Symptoms of Tuberculosis?
Weight loss, low grade fever, night sweats, symptoms related to whatever system is affected

Tx = 3 anti-microbials
Vertebral TB is TB where?
Pott's disease
Scrofuloderma TB is TB where?
cutaneous TB
Miliary TB is TB where?
wide spread hematologic dissemination yielding shot gun pellet type lesions in lung, CNS, GI, kidney, bones, or any other organ
Difference between Tuberculoid Leprosy and Lepromatous Leprosy?
Tuberculoid Leprosy = Limited granulomas form = disease is contained. rare, = Lepromin skin test. HLA-DR3 associated

Lepromatous Leprosy = Nodular skin lesions or ganulomas = pt can't mount a cell-mediated immune response. Systemic involvemnet, negative Lepromin skin test. NO HLA ASSOCIATION
Describe Actinomyces israelii
Gram + rod, water and soil saprophyte and normal flora of mouth. Over-gorwth = poor oral hygiene

Sites of infection form sulfer granules = bright yellow pus draining from abcess
Describe Nocardia asteroides
Gram + rod, grows in soil, infection mimics TB, avidly forms in sinuses
3 genera of Sporochetes?
Treponema, Borrelia and Leptospira
Describe Treponema pallidum
Sexually transmitted or transmitted via placenta

screening tests = VDRL or RPR

Confirm with TPHA
What are the stages of Trepenema pallidum?
Stage 1 = primary syphillis = painless hard chancre

Stage 2 = Seecondary syphillis = rash, condyloma lata, F/H,

Latent syphilis (1/3rd progress to this). Asymptomatic

Stage 3 = Tertiary Syphillis = gummas, CV (aortic insuff), neuro (dementia, psychosis, tabes dorsalis,), Charcot's joints
What causes Lyme disease?
Borrelia burgdorferi

Reservoir = white-footed mouse
Obligatory host = large mammels, esp deer
vector = tick Ixodes
Stages of Lyme disease?
Stage 1 = etrythema chronicum migrans
Stage 2 = multiple ECMs = neurologic problems (meningitis, Bell's palsy, tic doularoux, myocrditis)

Stage 3 = chronic arthritis (esp knees), progressive CNS disease that mimics MS
What causes relapsing fever every 8 days or so?
Borrelia recurrentis

vector = louse
human--> louse --> human

Dx = blood smear
Phases of Leptospirosis caused by Leptospirosis interrogans? (note: Weil's disease is like this)
Phase 1 = high spiking fever, H, conjunctival reddening, severe muscle aches of thighs and low back

Resolution = period of asymptomatic disease

Phase II = recurrence of stage 1 symptoms
Reticulate body is what?
C. trachomatis

Can cause Epididymitis and Prostatitis if untreated


Cervicitis and PID can also result
Chlamydia trachmatis can develop trachoma which is what?
conjunctivitis - blindness develops over 10-15 years
Chlamydia trachmatis can develop Neonatal inclusion conjunctivitis which is what?
Conjunctifvitis of neonates, yellow purulent discharge begins 5-12 days after birth
Chlamydia trachmatis can develop Chalmydia conjunctivitis which is what?
Adult conjunctivitis due to cross-contamination with infected genital secretions
Chlamydia trachmatis can develop Reiter's syndrome which is what?
Develops after Chalmydia genital infections = an immunological disease
C. psittaci can cause what?
pneumonia called psittacosis

get it from bird feces esp parrots
What are the symptoms of Typhus?
Sudden onset chills/flu-like feelings 1-3 weeks after arthropod bite. Then rash and meningeal problems. Death from vascular collapse or bacterial pneumonia
What are the 3 types of Typhus?
Epidemic, Endemic, (vector = lice, reservoir for epidemic = flying squirrel an humans, reservoir for Endemic = rats) Scrub (vector = mites, reservoir = rodents)

Rash starts around waist and spreads peripherally. spares palms, soles, face.
Very high predilection for capillary endothelium and can cause fulminant vasculitis, shock, and thrombosis. Primarily in Apalachia, Abrupt fever, H, chills, rash starts on extremities and spreads to trunk
Rocky Mt. Spotted Fever

caused by Rickettsia Rickettsiae

reservoir = dogs, rodents
Describe Q Fever
Fever, chills, pneumonitis, WITHOUT rash

The ONE Rickettsia disease NOT spread by bit of arthropod. reservoir = cattle, sheep, no vector

cause = Coxiella burnetti
Describe trench fever
2-4 weeks after louse contact, fevers every 5 days, chills, H, severe BONE PAIN and rash

Caused by Rochalimaea quintana

vector = lice, reservoir = humans
T/F: Rocky Mt. Spotted Fever starts peripherally and moves centrally
TRUE