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298 Cards in this Set

  • Front
  • Back
organic molecules
contain carbon
saccharides
carbohydrates
disaccharide- 2 - sucrose, maltose, lactose

monosaccharide-- one-- glucose, fructose

polysaccharide-- many-- starch, glycogen, cellulose, chitin
triglycerides
3 fatty acid and glycerol
lipid
phospholipid
tryglyceride but replace one fatty acid with a phosphate group (has P)
phosphate group=hydrophilic head
fatty acids=hydrophobic tails
steroid
lipid made of 4 carbon rings
Structural proteins
ex silk in spider webs and keratin in hair

structure
storage protein
ex zein in corn seeds

storage
transport proteins
in membranes to transport materials in and out of cell
defensive proteins
protection against foreign substances
enzymes
regulate rate of chemical reactions
peptide bonds
bonds between amino acids

chain of these is a polypeptide, or a peptide
amino acids
make up proteins
20 of them
central carbon, amino group, and carboxyl group
bond with each other by hydrogen bonding
primary structure of protein
order of amino acids
secondary structure of protein
3D shape that results from hydrogen bonding between amino and carboxyl groups of adjacent amino acids

alpha helix, beta pleated sheet
tertiary structure of a protein
additional 3D shaping
globular proteins
caused by hydrogen bonding, ionic bonding, disulfide bridge/bond, hydrophobic effect
bonds in polypeptide chain
tertiary structure
disulfide bridge--helps maintain turns in amino acid chain
hydrogen and ionic bonds--between R groups of amino acids
quaternary structure of protein
more than one peptide chain bonded toegther
nucleotides
nitrogen base, 5 carbon sugar, and a phosphate group
DNA and RNA
hydrogen bonding
types of nucleotides--adenine, thymine, uracil, guanine, cytosine
DNA
deoxyribonucleic acid
adenine thymine, guanine cytosine
deoxyribose
double stranded
RNA
ribose
codes for proteins
adenine uracil, guanine cytosine
single stranded
catabolic
break down
anabolic
build up
cofactors
non protein molecules that assist enzymes
coenzymes
organic cofactors
usually accept or donate electrons
inorganic cofactors
inorganic cofactors
metal ions
ATP
RNA adenine nucleotide with 2 additional phosphates
phosphorylation
ADP combines with a phosphate group to create ATP
allosteric activator
induces active form of enzyme
allosteric inhibiter
induces inactive form of enzyme
feedback inhibition
product of series of reactions acts as allosteric inhibitor for the series
competitive inhibition
mimics substrate and occupies active site so enzyme becomes inactive
noncompetitive inhibitors
binds to enzyme at site other than active site and alters the shape of the enzyme, making the enzyme inactive
cooperativity
enzyme becomes more receptive of substrates after one substrate attaches to active site
reverse reaction
in problems with series of metabolic reactions
exergonic
exothermal
release energy
endergonic
endothermic
absorb energy
hydrophobic
nonpolar
hydrophilic
polar
glycosidic linkage
joins two sugar molecules to form a disaccharide
plasma membrane/cell membrane
--double phospholipid membrane (lipid bilayer)
- non polar hydrophobic tails--inside
-polar hydrophilic heads- outside
- proteins scattered in it
- fluid mosaic model
peripheral proteins
attach loosely to inner or outer surface of cell membrane
integral proteins
extend into cell membrane
transmembrane proteins
span across cell membrane, appearing at both surfaces
fluid mosaic model
mosaic nature of scatter proteins within the flexible matrix of phospholipid molecules
channel proteins
provide open passageways through cell membrane for certain hydrophilic molecules
ion channels
allow passage of ions across cell membrane
gated channels
ion channels in nerve and muscle cells that open and cose in response to electrical or chemical stimuli
porins
proteins that allow the passage of certain ions and small polar molecules through cell membrane
aquaporins
increase passage rate of water through cell membrane
carrier proteins
bind to specific molecules and transfer them across cell membrane after undergoing a change in shape
transport proteins
use ATP to transport materials across membrane
-active transport
- NA-K pump
Na-K Pump
active transport
Recognition Proteins
gives each cell type a unique identification--provides for distinction between cells
adhesion proteins
attached to neighboring cells or give cell stability
receptor proteins
provide binding sites for hormones and other trigger molecules--activates cell response--in cell membrane--cell communication
cholesterol
provide rigidity to cell membrane
nucleus
contains chromatin normally, during cell division becomes chromosomes
- nucleosomes
--nucleoli
-nuclear envelope
nuclear envelope
2 phospholipid bilayers
chromatin
thread like DNA
- not during division
chromosomes
condensed chromatin during cell division
histones
DNA coils around histones to form nucleosomes
nucleosomes
bundles of DNA formed by histones
in nucleus
nucleoli
in nucleus
build ribosomes
ribosomes
manufactured by nucleoli in nucleus
build proteins from amino acid
endoplasmic reticulum
rough ER--creates glycoproteins
smooth ER-- synthesis of lipids and hormones, break down toxins
Golgi apparatus
modify and package proteins and lipids into vesicles, which release them to outside environment
vesicles
sacs that carry materials from golgi to cell membrane
lysosomes
sacs containing digestive enzymes
only animal cells
peroxisomes
break down various substances
mitochondria
aerobic respiration
ATP from carbs
chloroplasts
photosynthesis
microtubules
filaments(micro and intermediate)
protein fibers
shape and movement of cytoskeleton
cytoskeleton
internal structure of cytoplasm
spindle fibers
guides the movement of chromosomes during cell division
centrioles
microtubule organizing centers
gives rise to microtubules that make up spindle apparatus
centrosomes
pair of centrioles enclosed in a centrosome
basal bodies
base of flagellum and cilium and organize their developement
food vacuoles
-receive nutrients
storage vacuoles
in plants
store starch, pigments, and toxins
transport vesicles
movement of materials between organelles or organelles and cell membrane
central vacuoles
plant cells
rigidity of cell by putting pressure on cell wall--exerting turgor
cell walls
plants, fungi, protists, bacteria
cellulose in plant and some fungi
chitin in some fungi and others
peptidogylcan in bacteria
support and structure for cell
anchoring junctions
protein attachments between animal cells for mechanical stablity
desmosomes
desmosomes
anchoring junction
mechanical stability
tight junctions
animal cells
passage of materials
communicating junctions
allow transfer of signals
gap junctions
animal cells
allow communication between cells by electrical signals
plasmodesmata
plant cells
material exchange
differences between plant and animal cells
plant--cell wall, choloroplast, central vacuoles
animal--lysosomes, centrioles, cholesterol
prokaryotes
plasma membrane, a DNA molecules, ribosomes, cytoplasm, cell wall
- no nucleus
hypertonic
higher concentration of SOLUTES
hypotonic
lower concentration of SOLUTES
isotonic
equal concentration of SOLUTES
simple diffusion
net movement of substances from high concentration to low
osmosis
diffusion of water molecules
dialysis
diffusion of solutes across membrane
plasmolysis
movement of water out of cell resulting in collapse of cell
facilitated diffusion
diffusion of solutes or water through channel proteins to increase rate
active transport
movement of solutes against concentration gradient by use of ATP
exocytosis
vesicles fusing with cell membrane and releasing contents to outside
endocytosis
cell membrane engulfs substance and brings it into cell by vesicle
phagocytosis, pinocytosis, receptor-mediated
phagocytosis
type of endocytosis when undissolved materials are wrapped around by membrane and engulfed, forming a phagocytic vesicle
pinocytosis
dissolved substances enter cell by cell folding inward to form channel--channel closes off and forms a vesicle surrounding the liquid
receptor mediated endocytosis
form of pinocytosis where specific molecules bind to specialized receptors
ligands
specific molecules that attach to specialized receptors
cellular respiration general formula
glucose + oxygen = carbon dioxide + water + ATP
aerobic respiration
glycolysis, Krebs cycle, oxidative phosphorylation (ETC)
glycolysis
1. 2 ATP added
2. 2 NADH formed
3. 4 ATP produced
4. 2 pyruvates formed

in cytoplasm
Krebs Cycle
1. pyruvate to acetyl CoA---produces NADH and CO2 as well
2. Krebs Cycle--3 NADH, 1 FADH, 1 ATP, CO2

mitochondria--matrix
NADH
FADH
energy containing coenzyme
Oxidative Phosphorylation
-ETC
- NADH and FADH release electrons which phosphorylate ADP to ATP
- produces H2O and ATP
-mitochondria--cristae
chemiosmosis
ATP generation by proton concentration gradient
1. Krebs cycle produces NADH and FADH
2. Electrons removed from NADH and FADH
3. H+ ions (protons) are transported to intermembrane compartment
4. creates a pH and electrical gradient
5. ATP synthase generates ATP
substrate level phosphorylation
energy is in phosphate group and both its energy and phosphate group are transferred to ADP to form ATP
oxidative phosphorylation
phosphate group added to ADP to form ATP but energy comes from electrons in ETC
Anaerobic respiration
in absence of oxygen
lactic acid and alcohol
glycolysis
goal is to replenish NAD+ so glycolysis can happen
---cytoplasm
role of oxygen in aerobic respiration
to take hydrogens from NADH so NAD+ is produced and can start glycolysis
--becomes water
Alcohol Fermentation
plants, fungi, yeast, bacteria
first glycolysis, then...
1. pyruvate to acetaldehyde and CO2
2. acetaldehyde to ethanol and NAD+
3. glycolysis continues with NAD+
Lactic Acid Fermentation
humans, mammals
1. glycolysis
2. pyruvate to lactic acid and NAD+
3. glycolysis
general equation for photosynthesis
and steps
CO2 + water + light = glucose + oxygen
chloropast
light dependent reaction(cyclic or non cyclic) to calvin cycle to ETC
Noncyclic Photophosphorylation
Light Reaction
1. Photosystem II--electrons excited
2. primary electron acceptor
3. ETC
4. Phosphorylation--makes ATP
5. Photosystem I-- electrons energized again and passed to new primary electron acceptor
6. NADPH-- energy containing coenzyme
7. splitting of water--replaces lost electrons and gives H to NADPH
chloroplast--thylakoid membrane
Cyclic Phosphorylation
Light Reaction
uses only photosystem I to only produce ATP
chloroplast-thylakoid membrane
Calvin Cycle
dark reaction, light independent reaction
fixes CO2 to produce glucose
C3 photosynthesis
1. carboxylation-uses rubisco
2. reduction
3. regeneration
4. carbohydrate synthesis
chloroplast--stroma
takes CO2 and energy from ATP and NADPH to produce glucose
photorespiration
rubisco fixes oxygen as well as carbon dioxide--reduces efficieincy of fixing CO2 and wastes energy
C4 photosynthesis
converts CO2 to malate, moves it to bundle sheath cells where there is little oxygen, and then converts back to CO2 so photosynthesis occurs without oxygen present
CAM photosynthesis
at night stomata open and bring in CO2 and convert it to malic acid
during the day stomata close and malic acid is turn into CO2 so calvin cycle can occur
reduces water loss
diploid
2 copies of chromosomes
homologous pairs
haploid
monoploid
1 copy of chromosome
number of human chromosomes, homologous pairs, and chromatids
46 chromosomes
23 homologous pairs
92 chromatids
Interphase
longest part of cell division
G1--growth
S--growth and duplication of DNA--chromosomes become double stranded
G2- growth + prep for cell division
compare chromosomes of daughter cells and cells in division (for somatic cells)
daughter cells are diploid with single stranded chromosomes, while somatic cells in division are diploid with double stranded chromosomes for S phase of interphase
Prophase
1. nucleoli disappear and chromatin condenses into chromosomes
2. nuclear envelope breaks down
3. mitotic spindle assembled
Metaphase
metaphase plate--between two poles of spindle
chromosomes line up in center of cell and sister chromatids separate
how to count number of chromosomes
count the number of centromeres---a chromosomes can be double or single stranded
Anaphase
sister chromatids (chromosomes) pulled towards opposite ends of cell by spindle
at end, each pole has a complete set of single stranded chromosomes--same number as parent cell
Telophase
nuclear division
1. nuclear envelope develops around each pole, forming two nuclei
2. chromosomes disperse into chromatin
3. nucleoli reappear
cytokinesis
divides the cytoplasm to form two cells
cell plate in plants, cleavage furrow in animals
cell plate
during cytokinesis in plants, becomes the cell membrane for each daughter cell. cell walls develop between the membranes
secreted by golgi
cleavage furrow
animal cells
groove formed as daughter cells split in cytokinesis
Meiosis I
-similar to mitosis except crossing over occurs and 2 haploid daughter cells produced with double stranded chromosomes
Meiosis II
same as mitosis except done for each daughter cell from meiosis I, producing 4 haploid daughter cells with single stranded chromosomes
Prophase I
1. nucleolus disappears, chromatin condenses into chromosomes, nuclear envelope breaks down, spindle apparatus appear (just like mitosis)
2. homologous chromosomes pair--synapsis--tetrads
-crossing over
chiasmata
synapsis
homologous chromosomes pair during prophase I of meiosis to form tetrads
tetrads
a group of four chromatids (2 homologous chromosomes)
chiasmata
sites where crossing over occurs, close relation between non sister chromatids of tetrads
crossing over
--genetic variation
- genetic material exchanged between non sister chromatids of a tetrad in Prophase I
Metaphase I
homologous chromosomes spread across the metaphase plate
(line up in center)
Anaphase I
in tetrad, one double stranded homologous chromosome to one end, other to other end (the chromosomes forming tetrad split)
Telophase I
nuclear membrane reforms, each pole becomes a daughter cell with a haploid number of double stranded chromosomes
Prophase II
no crossing over, same as mitosis
Metaphase II
chromosomes align in center, same as mitosis except half the number of chromosomes
(chromosomes are double stranded)
Anaphase II
chromosomes pulled apart--one chromatid towards each end of cell
-same as mitosis except half number of chromosomes
Telophase II
same as mitosis, nuclear envelope reappears and cytokinesis occurs
--results in four haploid daughter cells
zygote
diploid cell produced by fertilization (fusing of sperm and egg)
grows into multicellular organism by mitosis
diploid--has homologous pairs--one homologue chromosomes from each parent
spores
produced during meiosis
plants
haploid cells that divide by mitosis to become multicellular haploid structure (gametophyte)
gametophyte
haploid multicellular structure produced by spores
-produces gametes by mitosis b/c is haploid already
sporophyte
fusion of gametes from gametophyte, then mitosis to produce the diploid multicellular structure (sporophyte)
--meiosis produced haploid spores to begin cycle again
alternation of generation
gametophyte and sporophyte stages are multicellular
genetic variation due to...
-crossing over
- independent assortment of homologues
- random joining of gametes
independent assortment of homologues
(law of independent assortment)
--during metaphase I each tetrad separates into 2 double stranded chromosomes independently of other tetrads
-Mendelian genetics
--different for each tetrad which chromosomes will go to which pole
random joining of gametes
during fertilization it is random which sperm fertilizes egg
surface to volume ration
limits size of cells b/c at certain size, inner part of cell can't reach outside fast enough
genome to volume ratio
at certain size there is not enough genetic material to regulate cellular activities
checkpoints for division
if conditions are not right cell will not divide
cyclin-dependent kinases
influence cell division by activating proteins that regulate cell division
growth factors
receptors that receive signals to stimulate cell growth
ex. sign from damaged cells stimulate other cells to divide
density dependent inhibition
stop dividing when cell density in area gets too high
anchorage dependence
cells usually only divide when attached to external surface like a neighboring cell
multiplication rule
multiply probabilities of each event
gene
genetic material on chromosomes that contains the instructions for a particular trait
allel
one of several varieties of a gene
locus
location of a gene on a chromosomes
homologous chromosomes
a pair of chromosomes that have the same genetic info gene for gene---each parent contributes one of the chromosomes in pair
may have different alleles
law of segregation
Mendelian genetics
one member of each chromosome pair goes to opposite pole so gametes only have one copy of each chromosomes (and allele)
test cross
to see if dominant phenotype is homozygous dominant or heterozygous dominant
--cross it with homozygous recessive
--homo. dom. will produce all phenotype dominant
-hetero. dom. will produce half dominant, half recessive phenotypes
incomplete dominance
blending
codominance
both traits are shown...no blending
multiple alleles
ex human blood type
epistasis
one gene affects the phenotypic expression of a second gene
ex. pigmentation--one gene codes for whether you have pigment or not, and one gene codes for the color of pigment---if first gene codes for no pigment, second gene not expressed
pleiotropy
single gene has more than one phenotypic expression

ex. gene for round/wrinkled seeds in pea plants influences phenotypic expression of starch metabolism and water absorption
ex. sickle cell anemia-- if you have the trait it affects other things
polygenic inheritance
many genes influencing one phenotype
continuous variation/bell curve
ex height in humans
linked genes
genes that are on same chromosomes and don't segregate independently b/c physically connected
inherited together
-ex genes A and B are inherited together
-perfect linkage--no crossing over
-crossing over usually occurs
DNA polymerase reads in what direction and makes in what direction...
reads 3-5
new strand is made antiparallel-- 5-3
perfect linkage
no crossing over
- expect 1/2 of offspring to be like one parent, 1/2 to be like other parent
-only gametes with parental phenotypes
independent assortment ratio
expect 1:1:1:1 of the four types of possible gamete phenotypes
linkage with crossing over ratio
expect 2 big groups--parental phenotype
expect 2 small groups--recombinant phenotypes
linkage map
portrayal of sequence of genes on a chromosome
recombination mapping
farther apart = higher crossover rate

map distance = crossover percent

# of progeny that crossed over/total number of progeny = crossover %
autosomes
non sex chromosomes
sex-linked genes
genes on the X chromosomes
men cannot pass the gene onto sons b/c to son they give Y chromosome
- men have increased risk of trait b/c they only get one allele for it, which is expressed
ex. hemophilia
Barr body
an inactivated X chromosomes as a result of X-inactivation
--only the active X chromosomes will express the trait
ex calico cats
Nondisjunction
failure of one or more chromosome pairs or chromatids of a single chromosome (sister chromatids) to properly separate during meiosis or mitosis
--produces gametes with extra or missing chromosomes
--error during anaphase I- failure of homologous chromosomes to separate
--during anaphase II- failure of sister chromatids to separate
- can happen in mitosis
-polyploidy
mosaicism
nondisjunction during mitosis of embryo
polyploidy
all chromosomes under meiotic non disjunction and gametes have twice the number of chromosomes
--polyploidy zygote can form in the polyploidy gamete is fertilized by another polyploidy gamete
point mutation
single nucleotide in DNA sequence is wrong
- substitution, deletion, insertion
aneuploidy
extra or missing chromosomes, usually due to non disjunction
--Down syndrome--trisomy 21
-Turner syndrome- non disjunction of sex chromosomes causes XO (no second chromosomes)
duplication
segment of chromosomes is repeated on same chromosome
inversion
chromosomes segment rearranged on same chromosome
translocation
segment of chromosomes moved to another chromosome
mRNA
provides instructions for assembling amino acid--tells tRNA what amino acids to bring
tRNA
delivers amino acids to ribosomes for assembling amino acids into a polypeptide chain
rRNA
combines with proteins to form ribosomes
semiconservative replication
when DNA replicates, each new double stranded DNA molecule has 1 old strand, 1 new strand
helicase
unwinds DNA for replication
topoisomerases
prevents knots and removes twists from double stranded DNA as helicase unwinds the double helix
Okazaki fragments
short segments of complementary DNA on the lagging strand
--joined by DNA ligase
DNA ligase
connects Okazaki fragments
primase
lays down an RNA primer to start DNA replication b/c DNA polymerase can only add nucleotides to an already existing complementary strand
telomeres/ telomeres
ends of eukaryotic chromosomes
enzyme that builds short segments off of telomere to prevent DNA loss
codon/anticodon
codon--3 adjacent nucleotides on mRNA
anticodon--on tRNA and base pairs with codon on mRNA
Transcription
initiation, elongation, termination
--formation of mRNA from a DNA template
initiation--transcription
RNA polymerase attaches to a promoter region on the DNA and begins to unzip DNA into 2 strands
promoter region
where RNA polymerase attaches to begin transcription
- TATA--sequence of promoter
elongation--transcription
give direction
RNA polymerase unzips DNA and assembles RNA nucleotides using one DNA strand as a template
-occurs in the 5-3 direction
termination--transcription
when RNA reaches a special sequence of nucleotides that serve as a termination point, transcription stops
RNA splicing
removes nucleotide segments from mRNA
-removes introns
introns
non coding regions of transcribed DNA
exons
sequences of transcribed DNA that code for a polypeptide
Translation
--create polypeptide chains from mRNA template
--initiation, elongation, termination
initiation--translation
ribosome and tRNA attach to mRNA---tRNA attaches with start codon methionine (AUG)
elongation--translation
tRNA's attach amino acids to ribosome/mRNA template
termination--translation
ribosomes encounters stop codon and translation ends
translocation
tRNA moves from A site to P site during translation
point mutation
single nucleotide error
substitution, deletion, insertion, frameshift
frameshift mutation
deletion or insertion of nucleotide--everything after that is changed
deletion
nucleotide is deleted from sequence
frameshift
substitution
incorrect nucleotide in place of correct one--only affects that codon
insertion
insertion of an extra nucleotide
frameshift
silent mutation
codon still codes for same amino acid
missense mutation
new codon codes for different amino acid
nonsense mutation
new codon is a stop codon
mutagens
radiation or chemicals that cause mutation
carcinogens
mutagens that cause uncontrolled cell growth
proofreading
DNA polymerase checks for errors and replaces incorrect nucleotides with the right ones
mismatch repair
enzymes repair errors that aren't caught by DNA polymerase
excision repair
enzymes remove nucleotides damaged by mutagens
euchromatin
DNA loosely bound to nucleosomes
--being actively transcribed
heterochromatin
nucleosomes tightly compacted--DNA in inactive
transposons
have the effect of a mutation
genes that jump to different location on same chromosome, or to new chromosome
phage
virus that attacks bacteria
virus
has a nucleic acid, either DNA or RNA, but not both
also has a capsid that surround nucleic acid, and sometimes an envelope around the capsid
capsid
protein coat surrounding nucleic acid of virus
lytic cycle
--replication of virus by virus inserting its DNA into host cell and forcing host to produce viruses, killing host
retroviruses
have RNA and use reverse transcriptase to make DNA complement of their RNA

ex HIV
lysogenic cycle
viral DNA is temporarily incorporated into host cell's DNA
--called prophage in this stage
--a stimulus will cause it to enter lytic cycle
prophage
viral DNA in lysogenic cycle
bacteria
prokaryotes, no nucleus, no specialized organelles
a chromosome in shape of circular DNA molecule
--reproduces by binary fission
binary fission
bacterial cell reproduces by chromosomes replication and then cell division into 2 cells each with 1 chromosome
--have plasmids
plasmids
circular DNA outisde chromosomes
carry beneficial but non essential genes
--replicate independently
conjugation
DNA exchange between bacteria
creates variation

ex F plasmid, R plasmid
F plasmid
transferred by conjugation
enables bacteria to produce pili
R plasmid
transferred by conjugation
provides bacteria with resistance to antibiotics
transduction
creates variation in bacteria
new DNA is introduced to bacteria by a virus---viral DNA takes up bacterial DNA during lytic cycle--if that virus infects another bacterial, that bacteria can get DNA from the other bacteria
transformation
bacterial variation by absorbing DNA from their surrounding

ex mice experiment
operon
unit of DNA that controls transcription of a gene
promoter
region of operon--sequence of DNA to which RNA polymerase attaches to begin transcription
operator
region of operon that can block the action of RNA polymerase if the operator is occupied by a repressor protein
structural genes
contain DNA sequences that code for enzymes
--in operon
regulatory gene
--operon
--produces repressor proteins and activator proteins
repressor proteins
occupy promoter region of operon to stop RNA polymerase from transcription
activator proteins
assist the attachment of RNA polymerase to the promoter region
lac operon
--catabolic
- inducible operon
trp operon
-anabolic
-repressible operon
inducible operon/enzyme
always off unless substance to break down is around--then it is induced to being transcription by the substance binding with repressor protein to make it inactive
repressible operon/enzyme
always on unless substance does not need to be produced, in which case the product binds with the repressor protein to make it active and stop transcription
regulatory proteins
repressors and activators that influence if RNA polymerase with attach to promoter region
nucleosome packing/DNA methylation
addition of methyl groups makes DNA inactive and won't transcribe
chromatin packing
tighter it is packed the harder it is to transcribe
RNA interference
blocks transcription or translation or degrades existing mRNA by producing double stranded RNA
recombinant DNA
contains DNA segments of genes from difference sources
vectors and cloning vectors
carries foreign DNA into a cell
--ex plasmid
-must be cut with same restriction enzyme as foreign cell DNA
-cloning vector must have prokaryotic promoter upstream of eukaryotic gene insertion site
ubiquitine
breaks down final form of protein to render translation ineffective
restriction enzymes
cut DNA--cut at specific recognition sequences
sticky ends
unpaired extensions on ends of double stranded DNA when using restriction enzyme
gel electrophoresis
DNA fragments separated by size
RFLP's
restriction fragment length polymorphisms
comparisons in size of DNA fragments
ex compare crime scene to suspect (DNA fingerprinting)
complementary DNA (cDNA)
--because bacteria can't remove introns from DNA, we produce cDNA because bacteria can read it
-produce it by taking mRNA and using reverse transcriptase
PCR
polymerase chain reaction
uses DNA polymerase to make a lot of copies of DNA fragments
1- nucleotides, primers, DNA, and DNA polymerase
2-heat it to separate strands
3- cool it- primers attach and DNA polymerase copies
prions
messed up proteins that mess up brain proteins
--causes mad cow
Griffith et al
transformation experiment with mice

bacteria take up DNA in environment
Hershey and Chase
prove DNA is coding agent in viruses
Chargaff
discovered base pairing of adenine and thymine, guanine and cytosine
Watson and Crick
double helix structure of DNA
stages of cell communication
reception, transduction, response
flaccid v turgid
flaccid = deflate
turgid = inflate
major element in living things
CHNOPS
Lamarck
fossils---changes over time
1. use and disuse
2. inheritance of acquired characteristics--incorrect--you can't pass on big muscles to son by working out yourself
3. natural transformation of species--incorrect
Hutton and Lyell
uniformitarianism---geological processes are slow
Hardy Weinberg Theory
allele frequencies in pop do not change over time if 5 conditions exist:
1. large pop
2. no migration
3. no mutations
4. random mating
5. no natural selection

p + q = 1 --allele frequencies in pop as whole

p^2 + 2pq + q^2 = 1 --specific genotypes in pop

p^2 = homo dom
q^2 = homo recessive
2pq = hetero
p = dominant q = recessive
microevolution
--new species originate
-- pop of organisms change from generation to generation
macroevolution
change in groups of related species over long period of time
stabilizing selection
favors middle
directional selection
favors one extreme
diversifying selection
favors both extremes
gene flow
addition or removal of alleles as a result of emigration or immigration
genetic drift
random increase or decrease in alleles
founder effect
allele frequencies in a group of migrating individuals are, by chance, not the same as that population of origin
bottleneck effect
dramatic decrease in size of pop---very vulnerable to genetic drift
spliceosomes
small nuclear ribonucleoproteins
formation of mature mRNA