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18 Cards in this Set
- Front
- Back
First point at which gene expression can be controlled
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transcription
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strength of promotor
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can vary the amount of gene product made
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transcriptional activators
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increase or upregulate transcription by enhancing the interaction between RNA pol and a promoter by binding the RNA pol or binding near the promoter regions upstream of the start site
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transcriptional repressors
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decrease or downregulate transcription
bind the operator region and block binding or advancement of the RNApol |
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allosteric proteins
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proteins whose activity is dependent on binding of a particular small molecule
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Catabolite activator protein
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allosteric activator
when glucose is absent cAMP is produced which activates CAP allowing it to facilitate transcription of various sugar utilization pathway genes known as catabolite repression |
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lac repressor
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deactivated by a small molecule which binds the operator in front of the genes required for lactose utilization and prevents their transcription in the absence of lactose
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covalent modification
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reversible modifications such as phosphoylation that can change the activity of some regulators
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LexA repressor
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prevents activation of the SOS DNA repair response
upon dna damage the RecA protein is produced which cleaves LexA irreversible reaction |
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Sigma factors
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a component of the RNA pol that provides specificity between the polymerase and the promoter
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alternate sigma factor
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allow RNApol to recognize atypical -10 promoter regions thereby limiting transcription of these genes to situations where the alternate sigma factor is produced
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antitermination
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rare case in which RNApol may be modified in a way that allows it to ignore termination signals and continue transcription
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Regulation at level of translation
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stability of mRNA (nuclease production, mRNA secondary structure, antisense RNAS)
efficiency of ribosome-binding site antisense RNA |
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Antisense RNA
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small untranslated RNA that is complementary to the beginning of a particular transcript
binds to the mRNA and prevents translation may also decrease mRNA stability |
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operons
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consists of two or more genes whose products function together in a particular cellular process
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regulons
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multiple individual genes or operons may be under control of the same transcriptional activator or repressor
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posttranslational modifications
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reversible ones include phosphoylation, methylation, acetylation
generally work by altering the conformation of the enzyme irreversible ones include posttranslational processing where a part of a protein is cleaved to activate or inactivate it |
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Bvg
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Bordetella virulence gene regulon
two-component regulatory which comprises the BvgS/ BvgA proteins. BvgA is a sensor kinase. It transfers the phosphate group to the transcriptional response regulator BvgA which can then bind to promoters of several genes and operons |