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207 Cards in this Set

  • Front
  • Back

major elements of the animal body

-oxygen


-carbon


-hydrogen


-nitrogen

matter

-anything that occupies space and has mass


-can exist as a gas, liquid or solid and is composed of elements

chemical symbol

the abbreviation of the name of a chemical used to identify the elements in the periodic table of elements

atom

the smallest unit of an element that retains the unique properties of the element

the subatomic particles are

-protons


-neutrons


-electrons

what happens if you change the number of protons in an atom?

-if the number of protons in an atom is changed the element is changed to another element, this can only be done with extraordinary means (like a nuclear reaction)

atomic number

the number of protons in an atom

what charge to protons have?

positive

isotope

one of two or more atoms have the same atomic number (same number of protons) but different masses (different number of neutrons)

what happens if the number of neutrons in an element are changed?

it becomes an isotope of that element

what is the charge of neutrons?

neutral

ion

an electrically charged atom or molecule

cation

positively charged ions

anions

negatively charged ions

what happens if the number of electrons in an atom is changed?

-the atom becomes an ion of that element


-if an electron is added it becomes negatively charged


-if an electron is removed it becomes positively charged

what is the charge of an electron?

negative

electron shell

-the grouping of electrons around the nucleus of an atom

inert

-chemicals with full outer electron shells that are therefore chemically inactive

atomic weight

-the average mass of an element


-determined by adding the number of neutrons to the number of protons

How many elements are there

-112 w/ 92 occurring in nature
-116 if including hypothetical and possibly nonexistent elements

Nitrogen, oxygen, hydrogen and carbon make up what % of the matter found in all living organisms
96%
The subatomic particles of an atom are:

-protons
-neutrons
-electrons

Molecule

-the smallest unit of substance composed of 2 or more atoms that retains the properties of the substance

molecule of an element

-two or more atoms of the same element joined together

compound

-a substance made up of 2 more elements

chemcial bond

-the atoms are sharing or transferring electrons between them


-it is the force by which atoms are bound in a molecule

the 3 types of chemical bonds

-covalent bond


-ionic bond


-hydrogen bond

covalent bond

-a chemical bond that is formed when atoms share electrons


-the strongest chemical bond

a single covalent bond

-a chemical bond that is formed when atoms share one electron

a double covalent bond

-a chemical bond that is formed when atoms share two electrons

a triple covalent bond

-a chemical bond that is formed when atoms share three electrons

polar molecule

-a molecule with oppositely charged ends


-sometimes the shared electrons in a covalent bond spend more time with one atom than with the other, this forms a molecule with oppositely charged ends


-ex: water

ionic bond

-a chemical bond formed when electrons are transferred from one atom to another


-the 2nd strongest type of chemical bond

what are the 2 scenarios in which an ionic bond is most likely to form?

-those with fewer than 2 electrons in their outer shell and those with nearly full out shells:


-an atom with 1 electron in its outer shell will be inclined to give up that electron so the "new" outer shell will be stable


-an atom that needs only one electron readily accepts electrons that will make its outer shell full and stable

electrostatic attraction

-the force between two particles of opposite electrical charge

hydrogen bonds

-a hydrogen bond is a specific type of weak ionic bond


-a chemical bond between hydrogen atoms already covalently bonded in a molecule to oppositely charged particles


-the weakest chemical bond

chemical reaction

-the formation and breaking of chemical bonds

chemical equation

-the way in which a reaction is described in writing


-shows the molecular formula of the reactants and the products as well as the direction of the reaction (indicated by an arrow)

the 3 types of chemical reactions

-synthesis reaction (requires energy)


-decomposition reaction (releases energy)


-exchange reaction (no net energy requirements)

synthesis reaction

-a new and more complex chemical is made from multiple, simpler chemicals


-new bonds are formed so energy is required


-potential energy is stored in the chemical bonds between the atoms

decomposition reaction

-a single, complex chemical is broken into multiple, simpler chemicals


-energy is released from the breaking of bonds


-the potential energy which has been stored in the bonds is released

exchange reaction

-certain atoms are exchanged between molecules: it is a combination of synthesis and decomposition reaction


-exchanged reactions have no net energy requirements


-the energy released from breaking the bonds is used to create the new bonds

factors which can influence the rate of chemical reactions
-concentration of reactants
-temperature
-catalysts/enzymes
-activation energy required

how concentration of reactants influence the rate of chemical reactions

-the more reactants that are available, the more likely they will come in contact and be able to react with each other

how temperature influences the rate of chemical reactions

-when temperature increases, the speed of molecular movement increases and the chance of the molecules meeting improves


-temperature also increases the velocity at which reactants meet and the velocity provides the energy for reaction

how catalysts/enzymes influence the rate of chemical reaction

-certain reactions require the presence of a catalyst


-reaction speed is increased when there are more catalyst proteins present

catalysts

-special proteins that hold the reactants of a chemical reaction together so they may interact


-a catalyst is not destroyed or used up by the reaction

inorganic molecules

molecules that do not contain hydrocarbon groups (hydrogen and carbon bonded together) and they often have ionic bonding

organic compound

molecules that contain hydrocarbon groups (hydrogen and carbon bonded together) and are usually covalently bonded

examples of inorganic molecules

-water


-salts


-acids


-bases

examples of organic compounds

-carbohydrates


-lipids


-proteins


-nucleic acids

properties of water

-water is a universal solvent


-water is an ideal transport medium


-water has a high heat capacity and a high heat of vaporization


-water is used for lubrication

solutes

substance that is dissolved into another

solvent

a substance in which another is dissolved

solution

two or more substances mixed together homogenously

hydrophilic

-water loving


-substances that dissolve or mix well in water


-usually polar molecules or ions

hydrophobic

-water hating


-substances that do not mix well with water


-usually electrically neutral, non-polar molecules

ionize

divide into separate ions

salts

-mineral compounds that have ionic bonds and are the principle form of minerals that enter and are stored in the body


-have the ability to transmit an electrical charge

acids

-ionically bonded substances that when added to water freely release hydrogen ions


-proton donors

bases

-alkaline compounds that are ionically bonded and ionize when in water and also release a hydroxal ion


-proton acceptors

what does the pH scale measure

alkalinity and acidity

what is 1 on the pH scale

the most acidic

what is 14 on the pH scale

the most alkaline

what is 7 on the pH scale

the middle of the pH scale and neutral

what pH does the animal body maintain

around 7.4

what happens when an acid and a base are mixed together?

-they neutralize each other


-they bring the pH of the scale closer to 7

buffers

-buffers are weak acids and bases are ones that do not completely ionize in water


-buffers help cells maintain a neutral pH by not allowing excessive hydrogen or hydroxyl ions to accumulate

what happens when a weak acid or a weak base is added to water?

-it does not ionize completely and it will act as either an acid or a base to bring the solution to a neutral pH

organic molecule

-contain hydrocarbon group


-typically have covalent bond

functional group

-a group of atoms that define the properties of an organic molecule


-allows for differentiation between molecules with similar hydrocarbon structures

macromolecules

long, complex molecules often with repeating units

carbohydrates

-molecules used for energy, storage of energy, and cellular structures


-composed of carbon, hydrogen, oxygen

monosaccharides

-the simplest form of a carbohydrate

Phosphorylation
The breaking of the bonds in ATP in order to use the energy stored in the molecule
Cellular respiration
The process by which cells use nutrients to create ATP
Where is ATP made?
The mitochondria
Where is ATP made?
The mitochondria
ATP
-The main form of energy used by the cells
-fuels any work the cells need to do
-adenosine triphosphate
Where is ATP made?
The mitochondria

ATP

-The main form of energy used by the cells
-fuels any work the cells need to do
-adenosine triphosphate
ATP stands for...
Adenosine triphosphate

Where is ATP made?

The mitochondria

ATP

-The main form of energy used by the cells
-fuels any work the cells need to do
-adenosine triphosphate
ATP stands for...
Adenosine triphosphate
What is the main form of energy used by cells?
ATP (adenosine triphosphate)
What are the 3 types of RNA?
-transfer RNA
-messenger RNA
-ribosomal RNA
Transfer RNA
Copies the information in the DNA molecule
Transfer RNA
Copies the information in the DNA molecule
Messenger RNA
Carries the information out of the nucleus
Transfer RNA
Copies the information in the DNA molecule
Messenger RNA
Carries the information out of the nucleus
Ribosomal RNA
Uses the information to create proteins needed by the body
How many strands of nucleotides does RNA have?
One strand

How many strands of nucleotides does RNA have?

One strand
Which nucleotides are found on RNA?
-uracil
-adenine
-cytosine
-guanine
How many strands of nucleotides does RNA have?
One strand
Which nucleotides are found on RNA?
-uracil
-adenine
-cytosine
-guanine

How many strands of nucleotides does RNA have?

One strand
Which nucleotides are found on RNA?
-uracil
-adenine
-cytosine
-guanine
Which nucleotides are found on both RNA and DNA
-Adenine
-guanine
-cytosine
Which nucleotides are found on DNA?
-Thymine
-adenine
-cytosine
-guanine
How many strands of nucleotides does RNA have?
One strand
Which nucleotides are found on RNA?
-uracil
-adenine
-cytosine
-guanine
Which nucleotides are found on both RNA and DNA
-Adenine
-guanine
-cytosine
Which nucleotides are found on DNA?
-Thymine
-adenine
-cytosine
-guanine
Which nucleotides are only found on RNA?
Uracil
How many strands of nucleotides does RNA have?
One strand
Which nucleotides are found on RNA?
-uracil
-adenine
-cytosine
-guanine

Which nucleotides are found on both RNA and DNA

-Adenine
-guanine
-cytosine
Which nucleotides are found on DNA?
-Thymine
-adenine
-cytosine
-guanine
Which nucleotides are only found on RNA?
Uracil

Which nucleotides are only found on DNA?

Thymine

How many nucleotides code for 1 amino acid?

3 nucleotides
What is the sugar in DNA?
Deoxyribose
What is the sugar in DNA?
Deoxyribose
What is the sugar in RNA?
Ribose
How many strands does DNA have?
2 strands which spiral around each other in a double helix
The function of DNA
-contains all the instructions needed by the cell to produce proteins
-It is the blueprint for all proteins in the body
Function of RNA


-transfers the protein making instructions out of the nucleus and into the cytoplasm of the cell and builds the proteins
-It is the scanner/fax/printer that brings the instructions where they are needed

At least how many amino acids must be joined together to make a protein?

100 amino acids
What are the largest molecules in the body?
Nucleic acids
Which elements are Nucleic acids made up of?
-carbon
-hydrogen
-oxygen
-nitrogen
-phosphorus

The 2 classes of Nucleic acids are...

-DNA
-RNA

Where is DNA found?

Mainly in the nucleus but also some maternal in the mitochondria

What is the structure of a nucleotide?
-5 carbon pentose sugar
-phosphate group
-nitrogenous base
Which elements make up carbohydrates?
-carbon
-hydrogen
-oxygen
Which elements make up carbohydrates?
-carbon
-hydrogen
-oxygen
What is the function of carbohydrates?
Energy, storage of energy, cellular structures

Hexose sugar

A sugar with 6 carbon atoms

Pentose sugar

A sugar with 5 carbon atoms
Examples of Hexose sugars

Glucose, fructose

Dehydration synthesis
-a synthesis reaction wherein water is a byproduct
-the combination of 2 or more simple materials to form 1 or more complex materials by removing water
Hydrolysis
The breaking down of more complex materials into simpler ones by adding water
Anabolism

The process by which cells use synthesis reactions to build molecules needed for cellular respiration

Catabolism
The process by which cells use decomposition reactions to release energy held in bonds between atoms and to generate the simple molecular building blocks needed by the cell

Disaccharide

When 2 monosaccharides are joined together via dehydration synthesis
Polysaccharide
The combination of many monosaccharides, all joined together by dehydration synthesis
Disaccharide
When 2 monosaccharides are joined together via dehydration synthesis
Polysaccharide
The combination of many monosaccharides, all joined together by dehydration synthesis

Glycogen

A polysaccharide that stores fuel in body tissues
Disaccharide
When 2 monosaccharides are joined together via dehydration synthesis

Polysaccharide

The combination of many monosaccharides, all joined together by dehydration synthesis
Glycogen
A polysaccharide that stores fuel in body tissues
Cellulose

A polysaccharide that provides structural strength to plants

Glycoproteins

-a macromolecule composed of a carbohydrate attached to a protein
-plays an important role in the adhesion of the cell to other cells and in recognition of molecules to be transported into the cell

Function of lipids

Used in the body for energy and stored in fat for future energy needs

The 4 classes of lipids

-neutral fats (triglycerides)
-phospholipids
-steroids
-eicosanoids

Chemical makeup of lipids
Carbon, hydrogen, oxygen (but much less oxygen than carbs)

Glycerol molecule

-A modified three-carbon simple sugar


-the main component in triglycerides

Structure of a neutral fat/triglyceride

Contains 3 fatty acids and a glycerol molecule

Fatty acid

A chain of carbon atoms with one or two hydrogen atoms attached to each carbon by double (unsaturated) or single bonds (saturated)

Saturated fatty acid

-A fatty acid when all the bonds in the hydrocarbon chain are single bonds & as many hydrogen atoms as possible are attached to the chain
-mainly found in animal fats like butter and lard
-solid at room temperature
Saturated fatty acid
-A fatty acid when all the bonds in the hydrocarbon chain are single bonds & as many hydrogen atoms as possible are attached to the chain
-mainly found in animal fats like butter and lard
-solid at room temperature

Unsaturated fatty acid

-when there are some double bonds between the hydrogen and carbon atoms in the hydrocarbon chain
-mainly of plant origin like corn oil and olive oil
-liquid at room temperature

What are the 3 types of eicosanoids?

-prostaglandin
-thromboxane
-leukotrienes
Prostaglandin
-mediates inflammation
-an eicosanoid
Prostaglandin
-mediates inflammation
-an eicosanoid
Thromboxane
-mediates platelet function
-an eicosanoid

Leukotrienes

-mediate bronchoconstriction and increased mucus production
-an eicosanoid

glucose

-the primary fuel of the body


-6 carbon ring with another functional carbon group


-hexose sugar

fructose

-a 6 carbon string, can be a string or a ring


-the primary sugar in fruit which is then converted to glucose in the body


-hexose sugar

glycolipids

-a macromolecule composed of a lipid and a carbohydrate


-plays an important role in the recognition of molecules to be transported into the cell

triglycerides/neutral fats

-hydrophobic


-stores energy for future use


-protects organs against impact


-insulates body and organs


-ex: adipose tissue

example of triglycerides/neutral fats

adipose tissue

lipoprotein

-a macromolecule composed of proteins and lipids


-used to transport fats within the body


-the hydrophilic proteins allow the hydrophobic fats to be shielded from the blood plasma to be transported

structure of phospholipids

-2 fatty acids attached to a glycerol backbone facing in one direction in place of a 3rd fatty acid (like the triglycerides) they have a phosphate group attached to a nitrogen-containing compounded extending in the other direction

the "head"side of a phospholipid

-the head side is the phosphate group side


-it is water soluble, polar and hydrophilic

the "tail" side of the phospholipid

-the tail side is the lipid side


-it is water-insoluble, hydrophobic and non-polar

lipid bilayer

-the unique water-related proteins are what cause the phosopholipids to line up with the tail ends facing/touching each other and the head ends facing out when placed in a polar substance like water


-the hydrophilic heads form hydrogen bonds with the water and the tails repelled from the water bump up against other tails


-the main component of a cellular membrane

steroids

-lipids that take the form of 4 interlocking hydrocarbon rings


-different types of steroids are formed by attaching unique functional groups to the four-ring structure of the molecule


-they are hydrophobic non-polar substances with very little oxygen


-they are all similar in structure and can potentially be converted into one another

example steroids

cholesterol, cortisone, estrogen, progesterone, testosterone

eicosanoids

-lipids formed from a 20-carbon fatty acid and a single ring structure


-important substances in the mediation of complex chemical processes in the body such as inflammation, clotting, bronchoconstriction and mucus production

where are steroids produced

-adrenal glands, testes, ovaries

what is the most abundant organic molecule in the body?

proteins

what are proteins made up of?

amino acids

which elements are proteins made up of?

carbon, oxygen, hydrogen, nitrogen

functions of proteins

-cell structure of body tissue


-regulating growth and transporting molecules


-defending the body against invaders


-catalyzing reactions

structure of amino acids

-a central carbon atom attached to a hydrogen atom


-an amino group


-a carboxyl group


-a unique group of atoms called a side chain designed by the letter R

the R group of the amino acid

-the r group defines each amino acid


-the side chain depends on the amino acid

what orders the specific combination of amino acids?

the cell's dna

how many different amino acids are used in the body?

20

peptide bond

the bond by which a carboxyl group of one amino acid links with the other amino groups of another amino acid

dipeptide

a short chain of 2 amino acids

tripeptide

a chain of 3 amino acids linked together

polypeptide

a chain of 10 or more amino acids linked together

protein

when a chain exceeds 100 amino acids

primary structure of proteins

the sequence and number of amino acids that link together to form the peptide chain

the secondary structure of proteins

-the natural bend of parts in the peptide chain as it forms in three dimensions


-most common shapes are alpha helix and beta-pleated sheet

the most common shapes of the secondary structure of proteins

-alpha helix (slinky toy shape)


-beta-pleated sheet (an accordion shape)

the tertiary structure of proteins

the overall shape of a single protein molecule

the quaternary structure of proteins

-when two or more protein chains join to form a complex macromolecule

disulfide bond

when a sulfur atom in one part of a protein covalently bonds to a sulfur atom in another part of the protein

structural proteins

-stable, rigid, water-insoluble proteins that are used for added strength to tissues or cells


-often have a long stringy shape

structural proteins are aka

fibrous proteins because they often have a long stringy shape

examples of structural proteins

-collagen (the main protein in connective tissues like ligaments, cartilage, bone and tendons)


-fibrin (fibrous connective tissue in blood clots)


-keratin (the main protein in hair, hooves, horns, and outer layers of skin)

collagen

-structural protein/fibrous protein


-the main protein in connective tissues like ligaments, cartilage, bone, and tendons

keratin

-structural proteins/fibrous proteins


-the main protein in hair, hooves, horns and outer layer of skin

fibrin

-structural proteins/fibrous proteins


-the fibrous connective tissue in blood clots

functional proteins

-generally water-soluble and have a flexible 3D shape, which can change under different circumstances


-aka globular proteins


-highly chemically active molecules


functional proteins are aka

globular proteins because they have a convoluted changeable shape

examples of functional proteins

-hemoglobin


-antibodies


-protein-based hormones


-enzymes

enzymes

-proteins that catalyze or speed of chemical reactions without being destroyed or altered and are specific to the reaction that they catalyze (or their substrates)


-functional proteins/globular proteins

substrates

the substances enzymes act upon

how enzymes/substrates work

-via a lock and key method


-an enzyme fits its substrates exactly and is itself unaltered at the end of the reaction

hyperthermia

-elevated body temperature


-example causes include fever, heatstroke, prolonged seizures

denaturation of proteins

-when the hydrogen bonds holding proteins in their tertiary and quaternary structures are broken the proteins are released from their complex structures and stretch into a straight chain of amino acids


-because they no longer have their unique shape these proteins lose their function