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176 Cards in this Set

  • Front
  • Back

what is chemistry

chemistry is the science of the structures of matter

atoms are

atoms are building blocks of matter

what is matter

matter is anything that occupies space




what is mass

mass is the mount of matter in any object

what is weight

weight is the force of gravity acting on matter

in outer space weight is_____ but mass____

in outer space weight is close to 0 but mass remains the same as on earth

atoms

atoms are substances that can not be split into simples substances by ordinary means



over 115 elements (92 occur naturally)


4 elements that from 96% of body's mass

oxygen, carbon, hydrogen, and nitrogen

9 less common elements


Ca, P, K, Na, Cl, Mg, Fe, &I

atoms are smallest...

atoms are smalls units of matter that retain properties of an elements

atoms consists of 3 subatomic particles

protons +



neutotons o



electrons -

electrons

surround the nucleus as a cloud (electrons are designation regions of the cloud)

electron shells

most likely region of the elctron cloud where to find electrons

1st shell holds

2 electrons

2nd shell holds

8 electrons


3rd shell can hold

up to 8 electrons


higher shells can hold

up to 18 electrons

number of electrons =

# of electrons = # of protons

each atom is electrically __

neutral

what is atomic number

number of protons in the nucleus

that is mass number

the sum of its protons and neutrons

mole is

mole Is quantity of an element with a weight (in grams) = equal to that element's atomic weight

isotopes

atoms of an element with different numbers of neutrons & different mass numbers

all isoptopes of an elements have same properties which are ?

have same # if electrons( which determine its chemical properties)

only radioactive isotopes are unstable how do they become stable ?


they decay overtime to a more stable configuration

what is half-life

half life is time required for half of the radioactive atoms in a sample to decay

what are free radicals

atoms with an unpaired electron in is outmost shell



unstable and highly reactive

how can free radicals become stable (2)

by giving up electrons



taking one off another molecule ( breaking apart important body molecules)

how are free radicals produced

produced in your body by absorption energy in ultraviolet light in sunlight,



x-rays by breakdown of harmful substances , and during normal metabolic reactions

how may damaged be slowed

with antiolxidants such as vitamin C and E

what are chemicals properties

chemical properties are a function of the outer electron shell

ionic bonds

ionic bonds are formed from electrical attractions between ions of opposite charge

covalent bonds

covalent bonds are formed from sharing of electrons

Hydrogen bonds

hydrogen bonds are weak attractive forces between the positive poles from covalent hydrogen bonds and negative poles of other covalent bonds

cation

lose an electron



Sodium loses al electron to become Na+

anion

gains an electron



chlorines gains an electron to become Cl-

ionic compounds generally exists

exist as solids



NaCl table salt

Polar Covalent bonds

unequal sharing of electrons between atoms

in a water molecule oxygen attract hydrogen electrons more ___

in a water molecule oxygen attract hydrogen electrons more strongly

non-polar covalent

share the electron(s) equally no net charge

hydrogen bonds

only about 5 % as strong as covalent bonds



useful in establishing links between molecules

chemicals reaction

when new bonds form or old bonds are broken

metabolism

all the chemical reactions in the body

law of conversation of mass

total mass of reactants equals the totoal mass of the products

ADP + P = ATP

requires energy

ATP=ADP + P

releases energy

synthesis reactions

2 or more atoms, ions or molecules combine to form new & larger molecules

anabolism

all the sysntheis reactions in the bidy together

endergonic

require investment of energy



energy is stored in the new bonds




amino acids to from a protein molecule

Decomposition Reactions

large molecules are split into smaller atoms, ion or molecules

catabolism

all decomposition reactions occurring together in the body

exergonic

release energy stored in chemical bonds

chemical reactions can be reversivle

reactants can be products or products can revert to the original reactants


Chemicals reactions involve___

chemicals reactions involve energy changes

law or conservation of energy

energy can neither be created nor destroyed - just converted from one form to another

kinetic energy

energy of motion

potential energy

stored energy

what is chemical energy

chemical energy is potential energy stored in the bonds of molecules



digestion of food releases chemical energy so that It can be converted to hear or mechanical energy

activation energy

energy needed to begin a reaction

catalsyst do what

catalysts speed up chemical reaction by lowering the activation energy

normal body temperatures and concentrations are too ___ to allow chemical reactions to occur

are too low to allow chemical reactions to occur

enzymes orient the colliding particles properly...

so that they touch at the spots that make the reaction happen

enzymes are ___ by reactions and

enzymes are unchanged by the reaction, and can be used repeatedly in similar reations

most of the chemicals in the body are___

compounds (2 or more elements)

inorganic compounds

usually lack carbon & are structurally simple



water, oxygen, Co2, salts, acids, and bases`

organic compounds

contain carbon, hyrdrogen, and usually oxygen



always have covalent bond

most compunds exist in a nature as

mixtures

what is a mixture

a combination of elements or compounds that are physically blended but not joined by bonds --air

solutions

when solutes dissolved in a solvent

colloids

when solutes are mixed in a solvent



particles are larger so does not look clear (milk)



particles do not settle out of solution

suspensions

have larger solutes mixed in a solvent



particles settle out of solution because of size blood

water

most important inorganic compound in living systems



medium of nearly all chemical reaction


5 things about water

makes excellent solvent for ionic or polar substances



ions become electrolytes as they can conduct a current



gives water molecules cohesion (surface tension



allowes water to moderate temperature change



major component of lubricating fluids`



most versatile solvent

water

water has ____ bonds

polar covalent

water's shape allows__

waters shape allows each water molecule to interact with adjacent ions/molecules

H20 + NaCl

oxygen attracts sodium


sodium & chloride separate as ionic bonds are broken


hydration spheres surround each ion a posibilty of bonds being reformed

water____ many substancess

water dissolves or suspends many substances

non polar moleucles

do not have positive or negative poles



lack or few covalent bonds


when non polar covalent bonds are exposed to water

hydration spheres do NOT form and the molecules do NOT dissolve

hydrophibic

molecules that do not readily react with water



ex)fats and oils

ph 0-6

acidic

ph 8-14

alkaline


basic

ph of 1 ___ timex more H+ than pH of 2

ph of 1 (10 times more H+ than ph of 2)

ph of ______ is maintained in blood

7.35-7.45

water in chemical reactions

participates as a product or reactant in certain reactions in the body

hydrolysis reactions

water is added to separate it into 2 smaller molecules

dehydration synthesis reaction

two smaller molecules are joined to form a larger molecules releasing a water molecule

organic compounds

always contain carbon and hydrogen



usually large, unique molecules with complex functions



make up 40% of body mass

properties of carbon atoms

from bonds with other carbon atoms produce large molecules




with many different shapes (rings, straight, or branched chains)



some large molecules may not dissolve in water

many functional groups cab attach to carbon skeleton

ester, amino, carboxyl, phosphate groups

macromolecules


very large molecules (polymers if all monomers subunits are similar)

isomers

have same molecular but different structures



glucose & fructose are both C6H1206

sterioisomers

isomeric molecules that have the same molecular formula and sequence of bonded structure , but different 3-D orientations pf their atoms in space

carbohydrates (watered carbon)

diverse group of substances formed from C,H, and O





main function is source of energy for ATP formation



forms only 1-3 % % of total body weight`


glycogen

storage in liver and muscle tissue


sugar bulding bloacks of DNA & RNA

carbohydrates

monosaccharides

simple sugars



contains 3-7 carbon atoms



we can absord only 3 simple sugars without further digestion in our small intestine


3 examples of monosaccharides

glucose found in syrup or honey



fructose found in fruit



galactose found in dairy products

Disaccharides

formed by combining 2 monosaccharaides by dehydration synthesis (releasing water molecule)

sucrose =

glucose + fructose (both isomers)

maltose =

glucose + glucose

lactose=

glucose & galactose

Polysaccharides

contains 10 or 100's of monosaccharaides joined by dehydration synthesis to from starches

in animals glycogen

glycogen is a chain of hundreds of glucose molecules




found in liver & skeletal muscle



when blood sugar level drops, liver hydrolyzes glycogen to create and releae glucose into the bloodn

in planst cellulose is

large carbohydrates molecules used for energy storage


(rice, potatoes, grains)

lipids

fats



formed C , H, & O



18-25% of body mass`

examples of lipids

fatty acids, glycerides, steroids, phospholipids, glcyolipids, eiscosanoids, liproprotains, and some vitmainds

hydrophobic of lipids

fewer polar bonds because of fewer oxygen atoms



insoluble in polar solvents like water

lipoproteins

combines with proteins for transport in bloof

triglycerides

neutrals fats composed of a single glycerol molecule and 3 fatty acid molecule



very concentrated from of energy



source of insulation preventing heat loss



source of protection by cushioning delicate organs




3-carbon glycerol ml\molecule is the backbone



triglyceride structure

3 fatty acids & one glycerol molecule



fatty acids attached by dehydration synthesis

saturation of tryglyerides

determined by number of single or double covalent bonds



saturated fats contain single covalent bonds and ae covered with hydrogen atoms


monosaturated

are not complerlt covered with hydrogen-- olive, canpla, and peanut oils

polysaturated fats

contain even less hydrogen atoms-- safflower and corn oils along with oils from fatty fish

phosphliids composition

a polar head



a phosphate group (PO4)& glycerol molecule


can form hydrogen bonds with water




2 non polar fatty acid tails



interact only with lipids

amphipathic

molecules with polar & nonpolar parts


(phospholipid) composition of cell membrane

double layer of phospholipids with tails in center

how are steroids formed

formed from 4 rings of carbon atoms joined together

why are steroids classified as sterols

classified as sterols because they have alcohol group attached to one or more of the rings


cholesterol found in ____

found in animal cell membranes



starting material for synthesis of other steroids

cholesterol derivatives include

sex hormones & adrenal cortex hormones


bile salts


vitamin D

eicosanoids

lipid type derived from a fatty acids called arachidonic acid (from food sources only)

prostaglandins= wide variety of functions (6)

modify responses to hormones


contribute to inflammatory response


prevent stomach ulcers


dilate airways


regulate body temperature


influence formation of blood clots


leukotrienes=

allergy & inflammatory response

protein (polymer)

18-20% of body weight


contain carbon, hydrogen, oxygen, and nitrogen


constructed from combinations of 20 different amino acids

how are dipeptides formed from

2 amino acids joined by a covalent bond called a peptide bond

peptides formed

from a few amino acids (under 10)


polypeptide chains formed

from 10-100 (but can be as high as 200 amino acids (but can be as high as 2000 amino acids)

levels of structural organization

primary, secondary, tertiary, (and quaternary)



shape of the protein influences its ability to from bonds`

amino acid (monomer structure)

central carbon atom


amino group (NH2)


Carboxyl group (COOH)


Side Chains (R groups) vary between amino acidds

dipeptides formed from

2 amino acids joined by a covalent bond called a peptide bond- dehydration synthesis

polypeptides typically formed

from 10-100 amino acids

proteins contin

over 100 amino acids to form a functional until form polypeptides

primary is

unique sequence of amino acids

secondary

is alpha helix or pleated sheet folding

tertiary is

3-D shape of polypeptide chain

Quaternary is

relationship of multiple of multiple of polypeptide chains

Disulfide bridges

stabilize the tertiary structure of protein molecules


____ between sulfhydryl groups of 2 cysteine amino acids

covalent bonds between sulfhydryl groups of 2 cysteine amino acids

fibrous proteins

arranged in sheets or strands

Globular Proteins

compact, rounded and quite hydrophillic

____dictates function

Protein structure dictates function

7 protein functions

1. structural support


2. Metabolism of cell


3. Defense


4. Transport


5. Movement


6. Homeostasis


7. Plasma Membrane

structural support

collagen, keratine, etc

metabolism of cell

enzymes (similar enzymes from different organs are called isoenzymes)

defense

antibodies (IG's) & waterproofing of skin, hair and nails

transport

many hydrophobic substances are bound to transport proteins (globulins) for transport

movement

actin/myosin contract muscles

homeostasis

non steroidal hormones

plasma membrane-

glycoproteins for self recognition, and transmembraneous channels for selective permeability

function of protein depends on

depends on its ability to recognize and bind to some other molecle



this determined by its "folded" 3-D shape



hostile enviroments such as heat, acid, or salts will____

change a proteins 3-D shape and destroy its ability to function


enzymes

enzymes are protein molecules that act as catalysts

some enzyme=

apoenzyme + cofactor

apoenzymes

are the protein portion

cofactors

are non protein portion


cofactors may be

metal ion (iron, zinc, magnesium, or calcium)



may be organic molecules derived from a vitamin

enzymes usually end in suffux ___ and are named for the ___

enzymes usually end in suffix -ase and are named for the types of chemical reactions they catalyze

isoenzymes

same function different organ

bonds are made or broken

bonds are made or broken when atoms, ions or molecules collide

enzymes speed up reactions by

enzymes speed up reaction by properly orienting colliding molecules, reducing activation energy

1000+ known enymes ____ to 10 billions that in beaker

1000+ known enzymes speed up metabolic reactions to 10 billion times that in beaker


cofactor

non organic metal ion

coenzyme

organic vitamin

enzyme functionality (highly specific )

acts on only on substrate



speed up only one reaction

active site:

exact fit vs induced fit


enzyme functionality (very efficient)

speed up reaction up to 10 billion times faster

enzyme functionality (under cellular control)

rate of synthesis of enzyme


inhibitory substances


inactive forms of enzyme

DNA (polymer) structure

huge molecules containing C,H,O,N and phosphorus

a molecule of DNA is

a chain of nucleotideses

Nucleotide=

nitrogenous base (A-G-T-C) + pentose sugar+ phosphate group

each doube helix stand serves as

template for new DNA

RNA differe from DNA

single stranded


ribose sugar not deoxyribose sugar


uracil nitrogenous bases replaces thymine

types of RNA within the cell, each with a specific function

messenger RNA


Ribosomal RNA


Transfer RNA

ATP

temporary molecular storage of energy as it is being transferred from exergonic catabolic reactions to cellular activities