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33 Cards in this Set

  • Front
  • Back
mRNA
messenger RNA
Translation
to make protein from RNA, you must break the code
Minimum number to make twenty words (of amino acid possibilities)
4^3 = 64
How does the code work?
1. code words are 3 nucleotides long

2. 64 codons, or code words

3. codes occur in series, keeping it ordered

4. codons are non overlapping

READ THE RNA 5' TO 3'
The genetic code
is redundant, several codons can specify the same amino acid

Uracil - RNA
Thymine - DNA

the code shows RNA because it's decoded by a ribosome
How many codons make an amino acid?
61

3 do not because 2 are stop codes and 1 is a start
Start codon
AUG
Stop codon
UAA, UAG, UGA
How is an RNA copy made?
strand are separated, one strand is used as a template to build RNA, and uses complementary base pairing
What is needed to make RNA?
a gene to serve as a template, ribonucleotides, and several enzymes and proteins
What is transcription catalyzed by?
RNA polymerase builds the RNA, it can initiate polynulceotide synthesis and no primer is needed
Where does transcription begin?
starts on the promoter
How many templates in transcription?
One, the promoter decides which one is the template strand
What direction does it go?
cannot add to the 5' end, so it builds 5' to 3', adding to the 3'

READ 3' TO 5' to determine each template strand
RNA Promoter
Contains the start site, where RNA polymerase does its thing

transcription ends at the terminator
Non template strand
the strand that isn't being transcribed the promoter DNA polymerase will run along the template strand
Where will mRNA go after transcription?
to the cytosol
Three Steps to RNA Transcription
1. Initiation

2. Elongation

3. Termination
Initiation
the RNA polymerase attaches to the start site
Elongation
the RNA polymerase begins unwinding the template strand that it read 3' to 5', detaching it
Termination
the completed RNA transcript is off the DNA strands and the RNA polymerase come off the strands
How to count polypeptide chain in mRNA
find the first start codon (AUG), and then the last stop codon (UAA,UAG,UGA)

count in threes until you reach the stop. that's how many there will be
Coding region
region between stop and start codons
How is RNA translated?
1. codons are decoded by ribosomes

2. requires transfer RNAs

3. tRNAs recognizes codons through complementary base pairing
How does a ribosome decode?
requires tRNAs

and then they recognize the codons by complementary base pairing
What are tRNAs?
80 nucleotides long RNAs forming a 3-D L shape

they are held together through hydrogen bonds
Ends of the tRNAs
one end has a 3 nucleotide sequence called an anticodon which is complementary base paired to another codon

the other end carry the amino acid encoded by the codon they recognize to the ribosome
How is the correct amino acid joined to each RNA?
by tRNAs syntheses (they're enzymes)

there's 20, one for each amino acid
What's a ribosome and what does it do?
a large complex of polypeptides, with rRNA inside

has 2 subunits and a passage for the mRNA to go through

contains 3 binding site: A, P, E
The Ribosome Does 3 Things
1. facilitates base pairing: b/w a codon in mRNA and a tRNAs anti codon

2. catalyzes: the dehydration reaction that joins amino acids covalently, making peptide bonds

3. maintains the 'frame': of reading the polypeptide chain, from the start codon location
What's needed to make a protein?
mRNA

a set of amino acyl tRNAs to complement all of the codons

a ribosome
Where do tRNAs and rRNAs come from?
there must be genes encode for them, encoded by the genome and made by the transcription?
What is a gene?
a region of DNA encoding either a polypeptide or RNA