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19 Cards in this Set

  • Front
  • Back
Double Helix
Structure of DNA. Two strands which are anti parallel
Antiparallel
DNA's two sugar-phosphate backbones subunits run in opposite directions. Always run 5 prime to 3 prime.
Semi Conservative
When DNA replicates each of the two daughter molecules will have one new strand and one old strand.
Origin of Replication
The replication of chromosomes begin at particular sites called origins of Replication. Made of short stretches of DNA having a specific sequence of nucleotides.
Replication Fork
At the end of each bubble, a Y shaped region where the parental strands of DNA are being unwound.
Steps of DNA Replication
Step 1: Proteins that initiate DNA replication recognize the sequence and attach to DNA separating the two strands and opening up a replication bubble.
Step 2: Helicases unwind the double helix at the replication forks making them available as template strands.
Step 3: Single-strand binding proteins bind to the unpaired DNA strands, keeping them from repairing.
Step 4: Initial nucleotide is created as a primer. This RNA primer is then synthesized by primase.
Step 5: The completed primer, generally 5-10 nucleotides long, is thus base-paired to the template strand. The new strand will start from the 3' end of the RNA primer.
Step 6: DNA polymerase III adds the bases to the 3' end of the strand.
Step 7: DNA runs into the next RNA primer.
Step 8: DNA polymerase I removes RNA bases, replaces them with DNA Step 9:DNA ligase joins two strands.
Helicases
Enzymes that unwind the double helix.
Single-Strand Binding Proteins
Bind to the unpaired DNA strands, keeping them from repairing.
Topoisomerase
The untwisting of the double helix causes tighter twisting and strain ahead of the replication fork. This enzyme helps relieve the strain by breaking, swiveling, abd rejoining DNA strands.
Primer
The initial nucleotide chain that is produced during the DNA synthesis. Made of a short stretch of RNA.
Primase
Synthesizes the primer by adding more RNA nucleotides one at a time, using the parental strand as a template.
DNA Polymerase
Catalyze the synthesis of new DNA by adding nucleotides to a preexisting chain.
Leading Strand
DNA strands made by DNA polymerase III remaining in the replication fork and adding nucleotides in the mandatory 5' to 3'. only one primer is required for DNA polymerase III to synthesize the entire leading strand.
Lagging Strand
DNA polymerase must work in a 5' to 3' so it moves away from the replication fork. Occurs at the same rate in which the leading strand is made. Synthesized discontinuously as a series of segments.
Okazaki Fragments
Segments of the lagging strand. Named after the Japanese scientist who discovered them. Each fragment must be primed separately. DNA polymerase I cannot join the final nucleotide of the adjacent fragment. Another enzyme (ligase) must complete the strand.
DNA Ligase
Joins the sugar-phosphate backbones of all the Okazaki fragments into a continuous strand.
Mismatch Repair
Sometimes nucleotides sometimes evade proofreading by a DNA polymerase. In a mismatch repair, other enzymes remove and replace incorrectly paired nucleotides that have resulted from replication errors.
Nuclease
DNA-Cutting enzyme and the resulting gap is then filed with nucleotides using the undamaged strand as a template.
Telomeres
Eukaryotic chromosomal DNA molecules have special nucleotides called telomeres at their ends. Do not contain genes. Two protective functions. 1) Prevent the staggered ends of the daughter molecule from activating the cell's systems for monitoring DNA damage. 2) Kind of buffer zone that provides some protection against the organisms genes shortening. Postpone erosion.