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105 Cards in this Set

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Each cell contains the entire DNA information, but only ___ they need from within it.
use the genes
What does regulating gene expression mean?
CONTROLLING the types of proteins that made in the cell.
What are the two goals of regulating gene expression?
Turn off some genes
Turn on some genes.
What are ways to regulate genes?
-Regulating transcription
-Degrading mRNA, slowing its life span.
-Slowing down the processes
Read through 8.2 (genetic engineering)
BASIC NOTES
What is rBGH?
A protein
How do we grow rBGH?
-Transfer of rBGH gene to bacteria
-Bacteria serve as factories
What are restriction enzymes?
enzymes used by bacteria as defense, cut DNA specific sequences. allow us to make precise cut in DNA
What are Plasmids?
Small, circular pieces of bacteria which can be used to carry a gene into a cell
Two ways to produce recombinant ptoeins?
restriction enzymes
plasmids
Read 8.2
Read 8.2
Steps of producing (recombinant) proteins?
1. Remove gene from cow with restriction enzymes
2. Insert gene into bacteria plasmid
3. Insert recombinant plasmid
4. Extract the protein and inject it into cow.
What is Recombinant DNA?
a prefix used to indicate genetical engineering.
What are some examples of uses of recombinant proteins?
-Clotting proteins for hemophiliacs
-Insulin for diabetes
How do we make insulin?
(8.2) same was for recombinant proteins.
How much milk in the US has rBGH used?
20%
If ___, traits can change across generations.
genes make proteins, which make traits, which can mutate
Darwin defined evolution as what?
"Descent with modification"
Evolution and genetic change occurs in ___.
generations
INDIVIDUALS DO NOT EVOLVE.
POPULATIONS EVOLVE>
What is the gene pool?
All the available alleles and genetic information in a population.
Formal definition of evolution?
-Genetic change in a lineage of populations of generations, through time.
What allows for phylogenies to work?
Descent with Modification
What does descent with modification allow for?
family trees, phylogenies.
Why does descent with modification mean that a family tree exists?
-All life has DNA
-DNA similar in closer relatives
What do phylogenies resemble?
trees
The Y axes on phylogenenies is?
Time
Parts of a phylogenies?
-Branches - genetic connections
-Nodes - genetic divergence
Our BEST definition of evolution is?
A change of allele frequencies in a population

and

Descent with modificatio
What is regulating gene expression?
turning a gene on or off, or modulating it
What are the 5 ways to regulate gene expression?
-Regulation of Transcription
-Regulation of Chromosome Condensation
-Regulation of mRNA Degredation
-Regulation of Translation
-Regulation of protein degradation
How is regulation of transcription done in Eukaryotes?
activators
How is regulation of transcription done by Prokaryotes?
Repressor proteins
What is regulation of chromosome condensation?
condensing chromosomes, which prevents RNA polymerase from being able to access genes.
What is regulation by mRNA Degradation?
Regulation how long mRNA is?

(NUCLEASES cut them)
What is regulation of translation?
Regulating steps of translation
What is regulation of protein degradation?
Using enzymes (proteases) to affect lifespan of protein
Steps for cloning a gene with bacteria?
1. Remove Gene from cow chromosome with RESTRICTION ENZYMES.
2. Collect plasmid from bacteria and bind with gene from cow
3. Reinsert new RECOMBINANT PLASMID back into bacteria
4. Inject these (proteins, or whatever) back into cow.
How many of US cows use BGH?
One-third.
Biggest criticism of BGH?
Damage done to cows' health.
What was the primary belief about species before Darwin?
They were "fixed"
Why didn't pre-Darwinian ideas gain popularity?
-No theories backing the idea
-Limited Data
What did Lamarck argue?
Organisms changed through time be inheritance of ACQUIRED characteristics, like giraffes stretching or tails being cut off.
What historical factor allowed for Darwin to travel?
The age of exploration had just begun.
What were Darwin's credentials?
Medical dropout, preacher, naturalist.
What influences were had on Darwin during his travel?
Two books:
"Principles of Geology"
"Essay on the Principle of Population"
What were Darwin's initial observations?
A high degree of similarity AND variation. GEOGRAPHICAL VARIATION.
What claims did Darwin make?
-Changes in species related to adaption of environment
-Adaptions could lead to DIFFERENTIAL SURVIVAL AND REPRODUCTION
Why did Darwin publish his book so late?
He didn't publish until Wallace corresponded with him.
What are the three evidences of evolution?
-Fossils
-Homologous structures
-Similarity in DNA
Why did it matter that Wallace published his work along with Darwin?
They were indepdent but led to the SAME CONCLUSION.
What are fossils?
ONCE LIVING organisms that turned into rock
What animals do we have an abundance of fossils for?
Horses, whales, snails
What do Fossils show as evidence of evolutio?
trends in EVOLUTIONARY development of traits.
What do homologous structures show as evidence of evolution?
Similar structures mean similar ancestry.
What is a scientific theory?
many hypothesis that have been tested and support the same conclusion
What are the two criteria for a theory?
1. Represent a BODY of knowledge
2. Widely accepted
Most people could accept about how many evolutionary hypotheses?
Four
What are the 4 evolutionary hypotheses?
1. Static model
2. Transformation
3. Separate types
4. Common descent
Of the 4 evolutionary models, which is most likely true?
Common descent.
What is the static model of evolution?
Species arise separately, do not change
What is the common descent model of evolution?
Species change over time, new species can arise, common ancestor
What is the transformation model of evolution?
species arise separately but change over time
What is the "separate types" model of evolution?
species change over time, new species can arise, but all have separate ancestors.
What evolutionary model is supported by homology?
common descent
What is natural selection?
Some individuals having traits that make them more likely to SURVIVE and REPRODUCE
Natural selection works with what ability?
fitness
What is "fitness"?
The ability to procure resource for your own reproductive success
What are the categories of natural selection?
Stabilizing
Directional
Diversifying
What is stabilizing selection?
favoring of the average morph of a trait
What is directional selection?
favoring extrem morphs of a trait
What is diversifying selection?
favors two opposite morphs at the same time.
The three aspects of evolution?
Natural Selection
Mutation
Genetic Drift
What is genetic drift?
random changes in gene frequencies
What can lead to genetic drift?
environmental catastrophes
genetic bottlenecks
gene flow
What increases genetic diversity?
gene flow and mutation
What decrease genetic diversity?
natural sleection and genetic drift
What are genetic bottlenecks?
populations going through a rapid decrease of size and lose diversity
What is gene flow?
movement of indiviudals and their genes from one population to another. NOT MIGRATION
What is vertical change?
accumulated changes in a lineage, OVER TIME
Example of vertical change?
peppered moth: not a new species, but IS evlution
Natural selection is a ___ of evolutionary change.
mechanism
What is speciation?
the generation of new specias via some mechanism of change
Biological classification?
Kingdom
Phylum
Class
Order
Family
Genus
Spcies
How id biological classification carried out?
grouping organisms based on shared similarity and history.
What is Phylogeny?
Family trees
Parts of phylogeny?
Branches (stems) and nodes (divergences)
What are phylogenies based on?
similarity due to DNA
Broadly, what is a species?
all of a given kinds of a given organism.
How are specific species named?
with latin binomials,

"genus species"
What part of biological classification is most inclusive?
Kingdom/Phylum/HIGH PART
What are the three ways to define species?
Biological species
geneological species
morphological species
What is the biological species concept?
"species are a group of interbreeding individuals in a natural population"
What is the genealogical species concept?
"smallest group of reproductively compatible organisms containing ALL know descendants of a single common ancestor"
What is the morophological species concept?
reliable physical characteristics distinguishijng them from all species
By mixing the definitions of species, how can be MOST accurately define them?
Once isolation prevents two groups of individuals from mating and new species are former, often with moropholigcal differences.
How does genetic divergence take place?
when groups go through REPRODUCTIVE ISOLATION
What are the Speciation Mechanisms?
a) Pre-fertilization barriers
b) Post-fertilization barriers
Kinds of pre-fertilization barriers?
temporal - different reproduction time
ecological - different places
behaviorial - different behavior
mechanical - different parts
gamete incompatibility- different gametes
What are the types of post-fertilization barriers?
Allopatric speciation
Sympatrix speciation
What is allopatrix speciation?
a post-fertilization barrier in which a physical barrier prevents gene flow between 2 previously interbreeding populations.
What is sympatric speciation?
post-fertilization barrier occuring within a population without physical barriers.
What are niches?
placed occupied by a species with its ecosytem
What is adaptive radation?
spread of species of common ancestry into different niches
What is PUncatied evolution?
a way to have sudden speeds of evolution