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181 Cards in this Set
- Front
- Back
taxonomy
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the grouping of species based on vertical descent and common characteristics
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what are the three primary domains
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archea
bacteria eukaria |
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archea and bacteria are
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prokariotic
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order of which each domain is broken into
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kingdom
phyla class order family genes |
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characteristics of prokaryotes
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simple cell structure
no true nucleus no enveloped organelles horizontal + vertical gene transfer |
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characteristics of eukaryotes
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complex cell structure
nucleus membrane bound organelles only vertical gene transfer |
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what is a genome
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the complete genetic makeup of an organism
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the evolutionary history and relatedness of all living organisms can be illuminated by
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genome analysis
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genomics are
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techniques used to analyze DNA sequence in genomes
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what is a proteome
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the complete complement of proteins that a cell or organism can make
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proteomics are
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techniques used to analyze the proteome of a species
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biology is a scientific
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dicipline
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science is the (4 things) ...
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observation
identification experimental investigation theoretical explanation of natural phenomena |
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what is the scientific method used to test
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theories
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we should investigate life at
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different levels
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different branches of biology study at
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different levels using a variety of tools
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biology is the study of
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life
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two properties of life
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unity and diversity
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what is unity
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common set of characteristics based on biological evolution
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what is diversity
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many types of environments with diverse organisms
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what are the 7 characteristics of life
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cells + organization
energy use + metabolism response to environmental change regulations + homeostaisis growth and development reproduction biological evolution |
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what are the levels of organization
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atoms
molecules + micromolecules cells tissues organs organism population community ecosystem biosphere |
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what does evolutionary change involve
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mods to existing structures
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structures may be modded to
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serve new purposes
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legs used for walking were modded into
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dolphin flipper or bat wing
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evolutionary change is the
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vertical descent with mutation
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vertical descent with mutation is the
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change observed as a progression in a series of ancestors
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what is another name for lineage
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vertical descent
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mutation is
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random change in the genetic makeup of an organism
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benefit to mutation
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increased survival and reproduction
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natural selection is the
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beneficial change resulting in population increase
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example of natural selection
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change in horse teeth and size due to dietary shift and adaptation to climate changes (forests to grasslands)
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evolutionary change is
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horizontal gene transfer
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horizontal gene transfer most often involves
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prokaryotic organisms such as bacteria and the direct transfer of genetic material between different and same species
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evolutionary change also involves (3 things)
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antibiotic resistance
toxin production capsule formation |
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what is a hypothesis
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- proposed explanation of a natural phenomena
- educated guess based on previous observations - tentative answer to a well formed question |
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example of hypothesis
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maple trees drop leaves in atom because of shortened sunlight
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theory is a
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broad explanation of an aspect of the natural world substantiated by lots of evidence
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a scientific hypothesis must have these two qualities
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- must be testable
- must be falsifiable |
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data collected from hypothesis must be
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qualitative or quantitative
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what do hypothesis' do
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they make predictions that can be shown to be correct (hypothesis) or incorrect (null hypothesis)
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3 types of bonds are
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- covalent (polar or non polar)
- ionic - hydrogen |
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in covalent bonds
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atoms share electron pairs
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describe atom shells in covalent bonds
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bond between valence shells that are not filled
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what is the octet rule
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- atoms are stable when shell is full
- full shell is 8 electrons, except for hydrogen, which is 2 |
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polar covalent bonds are
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2 atoms, different electronegativity, form covalent bonds
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properties of water
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- covalent
- more electronegative oxygen than electronegative hydrogen - molecules have a partial negative change region and a partial positive change region |
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hydrogen bonds are
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- weak polar covalent bonds
- dashed or dotted lines - strong bond overall |
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gene box is called the
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toga box []----
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gene bonds are (letter pairs)
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H-T (double)
G-C (triple) A-T (double) T-A (double) C-G (triple) |
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what happens to atoms in ions
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loose or gain 1+ electrons
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cation is what charge
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+
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anion is what charge
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-
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in an ionic bond, what bonds to what
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cation bonds to anion
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example of ionic bond
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sodium cation bonds to chlorine to form salt
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in a chemical reaction
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1 or more substances form to new substances
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what properties do reactions share
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- all require energy
- reactions in living organisms require a catalyst - proceed in particular direction, eventually require equilibrium |
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what is a solvent
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a liquid
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what is a solute
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substance dissolved
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ions and molecules that have polar covalent bonds will what in water
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dissolve
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hydrophilic is
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polar covalent
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hydrophobic is
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non polar
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amphipathic has
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polar and ionized regions and polar at other sites
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what is concentration
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amount of solute dissolved
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what is molarity
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# moles in 1 liter of water
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change in state means
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gain or loss of energy
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how stable is water as a liquid
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extremely stable
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the colligitive properties of water depend on
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concentration
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adding solutes to h20 means
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lowered freezing point below 0 Celsius + raised boiling point above 100 c
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some animals produce what that dissolves in their body
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antifreeze
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water participates in
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hydrolsis and dehydration
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water provides what type of support
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force
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what does water remove
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toxic waste components
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three more properties of water
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evap cooling , cohesion, and adhesion
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pure water can ionize into
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hydrogen and hydroxide ions
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acids are molecules that
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release hydrogen joins in a solution
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what do bases lower
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the H+ concentration
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some bases release x and others bind y
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x- OH-
y- H+ |
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pH =
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log base 10 of the concentration of [H+]
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pH 6 or below
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acidic
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pH 7
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neutral
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pH 8 or above
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Alkaline
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cells are what percent water
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70-95
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cells are mostly made up of
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carbon
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organic molecules contain
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carbon
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is carbon abundant in living organisms?
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hell yea
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carbon macromolecules are
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large + complex
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carbon can form large and x molecules
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diverse
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carbon has how many electrons in outer shell
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4
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carbon needs how many to fulfill octet rule
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4
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carbon can make up to how many bonds
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4
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non polar bonds are what in water
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not soluble
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carbon can form what type of bonds
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polar or non polar, single or double
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polar bonds are what in water
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soluble
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functional groups are
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atom groups with special chemical features
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each functional group has the same
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solution
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just know that "aminos have the same"
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just know that "aminos have the same"
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isomers have
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2 structures, identical molecular formulas, different structures
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strut isomers have
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same atoms but different bonding relations
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sterioisomers have
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same bonding but spatial position is different
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what are the 4 types of organic molecules
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- carbs
- lipids - proteins - nucleic acids |
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monomer sub unit of protein
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amino acids
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monomer sub unit of DNA/RNA
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nucleotides
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monomer sub unit of Lipids
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NONE BITCH
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monomer sub unit of carbs
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monosaccherides
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carbs are linked to
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hydrogen and hydroxyl group. Mono, di, and polysaccharide
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monosaccharides have how many carbons
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5 and 6, whatever that means smh smh sumuh
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pentoses pairs with
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ribose
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deoxyribose pairs with
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hexose
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the remaining one pairs with
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glucose
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monosaccharides may be what form
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linear of ring
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glucose isomers are
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monosaccharides
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structural isomers are
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different arrangement, same isomers
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sterioisomers are
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geometric isomers
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disaccharides are
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carbs made of 2 monosaccharides joined by dehydration or condensation reaction
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disaccharides are broken apart by
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hydrolysis
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examples of disaccharides
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sucrose, maltose, lactose
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polysaccharides are
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linked together by long polymers
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structural role of polysaccharides
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cellulose
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lipids are composed of what atoms
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hydrogen and carbon
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what is the defining feature of lipids
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1. not polar
2. not soluble in water |
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fats are a mixture of
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triglicerides
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fats are formed by
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bonding glycerol to 3 fatty acids
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fats are joined by
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dehydration or condensation
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saturated means
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linked by a single covalent bond, solid at room temp
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unsaturated means
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one or more double bonds, 1 double mono saturated, 2 or more polyunsaturated, liquid at room temp
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amino fats are
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saturated
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unsaturated fats are
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healthier
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fat stores
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energy
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1 gram of fat stores
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twice as much energy as one gram of glycogen or starch
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fats can also be structural in providing
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insulation and cusioning
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what are phospolipids
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glycerol, 2 fatty acids and a phosphate group, and amphipathic molecules
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the phosphate region is
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polar, hydrophilic
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fatty acid chains are
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non polar and hydrophobic
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what are steroids made of
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4 interconnected rings of carbon atoms
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how is a steroids solubility
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not very water soluble
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estrogen and testosterone differ
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slightly
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proteins are composed of
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carbon, hydrogen, oxygen, nitrogen, and small amounts of other elements, notably sulfur
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amino acids are what
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monomers
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aminos have a common structure with
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variable R group
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how many aminos are there
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20 ked
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what determines structure and function
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side chain
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aminos form
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peptide bonds
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amino acids are made of
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1 or more polypeptides
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aminos are broken by
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hydrosis
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know how to draw these bonds
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know how to draw these bonds
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what are the 4 protein structures
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primary, secondary, tertiary, and quaternary
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what are nucleic acids responsible for
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the storage, expression, and transmission of genetic info
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how many classes of nucleic acids are there
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2
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dna contains
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purines and pyrimidines
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what are the two purines and how many rings
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adenine and guanine, 2 fused rings
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what are the two pyrimidines and how many rings
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thymine and cytosine, single carbon ring
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out of adenine thymine guanine cytosine purines and pyrimidines, which bind
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AT, CG, PP...remember none of them can be alone
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what were the percents that chargoff said
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20A 20T 30S 30G
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what are the actual percents
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15A 15T 35G 35C
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monomer of dna is
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nucleotide
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nucleotides are made of
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phosphate group, 5 carbon sugar, and a single or double ring of carbon and nitrogen atoms
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dna is bounded by
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3 prime carbon to 5 prime carbon
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what type of bonds in phosphate backbone
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covalent
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what type of bond between bases
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hydrogen
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energy part of the cell is
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ATP
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how does atp provide energy
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looses a phosphate to make energy for another bond to form
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compare dna to rna
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DNA: thymine, 2 strands, 1 form
RNA: uracil, single stranded, several form |
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know what a nucleotide, sugar, and lipid looks like
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know what a nucleotide, sugar, and lipid looks like
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x makes x makes x
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DNA makes RNA makes PROTEINS
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what does the R in dna group do
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allows dna or genes to interact
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what causes proteins to fold
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look up
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what determines the FUNCTION of a structure
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DNA
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what are the protein phases
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primary secondary tertiary and quaternary
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aminos start and end at what terminuses
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N to T. All aminos are in between
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what type of structures are formed in tertiary
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3D
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what is in the secondary protein structure
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folding, repeating or irregular, and caked regions
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what is the one amino that contains sulfur
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cystine
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what are the 4 factors promoting folding
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hydrogen bonds, ionic bonds and polar interactions, hydrophobic effects, and van de walls forces
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there is specific binding where in each protein
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at the surface
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what bridge is NOT involved in protein protein reactions
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disulfide
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why is disulfide bridge not involved in protein protein interactions
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because its a covalent folding property
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proteins contain what with their structures
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functional domain
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what has distant structures in proteins
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module or domains
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what is stat
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signal transducer and activation of transcription
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each stat protein domain has what
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its own specific function
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