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98 Cards in this Set

  • Front
  • Back

What is a description of cohort study design?

A cohort study starts with two groups without the disease, separates them into groups based on the exposure of interest (smokers vs non-smokers), and follows to see how many develop the disease.

What is a description of case-control study design?

Select a group of cases with the disease, a group of controls without the disease, and see who was exposed to the proposed cause.

Is a cohort study retrospective or prospective?

Prospective

Is a case control study retrospective or prospective?

Retrospective

What is nominal data?

Data with incomparable values (gender, yes or no)

What is ordinal data?

Data that can be ordered but without degrees of difference (most to least)

What is continuous data?

Data that is numerical and allows for difference (temperature or blood pressure). Interval and ratio are examples.

What is paired data?

Data that arises from the same individual at different points in time.

What test(s) for nominal data with two independent samples?

Chi squared, Fisher’s exact

When is Fisher’s exact test used?

With nominal data from two independent samples that are too small to use Chi squared.

When is Chi squared used?

With nominal data with independent samples. For more samples remember to apply Bonferroni.

When is Bonferroni adjustment used?

For Chi squared with more than two comparisons

What test(s) for nominal paired data?

McNemar’s test

When is McNemar’s test used?

With nominal paired data

What test(s) for nominal data with three or more independent samples?

Chi squared

What test(s) for ordinal data with two independent samples?

Mann-Whitney-Wilcoxon U-test, Wilcoxon Rank Sum (either), Kolmogorov–Smirnov

When is Mann-Whitney-Wilcoxon (U-test) used?

It is based on the median of ordinal data or non-parametric continuous data with two independent samples.

What test(s) for parametric independent continuous data with one or two groups?

T-test

When is t-test used?

Continuous parametric independent or paired data with up to two groups

What test(s) for ordinal paired data?

Wilcoxon signed rank test, or sign test

When is Wilcoxon signed rank test used?

With ordinal paired data

When is the sign test used?

With ordinal paired data, a less demanding Wilcoxon signed rank test

What test(s) for ordinal data with three or more independent samples?

Kruskal-Wallis

What test(s) for continuous parametric data with three or more independent samples?

ANOVA

What test(s) for continuous parametric data with three or more independent samples and confounders?

ANCOVA

When is Kruskal-Wallis used?

With non-parametric ordinal or continuous data with three or more unmatched groups. It is an ANOVA variation.

When is ANOVA used?

With ordinal or continuous parametric data of multiple samples to tell only if there is a difference anywhere.

When is Friedman test used?

With continuous non-parametric or ordinal data in three or more paired groups.

When is Cochran–Mantel–Haenszel used?

With nominal paired data in three or more groups.

What test(s) for ordinal paired data with multiple attempts?

Friedman test

What test(s) for nominal paired data with multiple attempts?

Cochran–Mantel–Haenszel

What test(s) for normality (parametricness) of continuous data?

Shapiro–Wilk, Kolmogorov–Smirnov (Lilliefor), or Anderson–Darling tests. Differences are hopefully beyond BCPS.

What test(s) for correlation of parametric data?

Pearson

What test(s) for correlation of non-parametric data?

Spearman

What correlation coefficient (r) value(s) shows greater association between variables? What test is this associated with?

Close to -1 or 1. Ranges -1 to 1.


Spearman test for correlation of nonparametric data.

What coefficient of determination (r2) value(s) shows the regression line fits the data? What test is this associated with? What would a result of 0.8 mean?

Close to 1. Ranges 0 to 1.


Pearson test for correlation of parametric data.


80% of the variability of Y is explained by the variability of X

How does power relate to the confidence interval?

Low power will have a wide confidence interval, good power will have narrow confidence intervals.

What is an acceptable power level?

20%

What is the difference in definitions between correlation and regression?

Regression is predictive, correlation is not.

What is the formula for standard deviation?

Square root of variance. Variance is squares of difference from the mean summed, then divided by n.

What is a definition of the standard deviation result?

Values that amount above or below the mean are one standard deviation away. Requires normal distribution.

How much of a normally distributed sample falls within 1 and 2 standard deviations from the mean?

68% and 95%

What is a definition of Standard error of the mean (SEM)?

The standard deviation of sample means over all possible samples drawn from the population.

What is the formula for standard error of the mean (SEM)?

SEM = SD / square root of n

What is the layout of a risk table?

Columns left to right are whether disease is truly present or absent. Rows are whether subject is exposed to suspected risk factor.

What is the layout of a contingency table?

Columns left to right are whether disease is truly present or absent. Rows are whether test resulted positive or negative. (a,b,c,d = TP, FP, FN, TN)

What are the formulas for Experimental event rate (EER) and Control event rate (CER)?

EER = a/a+b, CER = c/c+d

What is a definition of absolute risk reduction (ARR)?

The simple difference in incidence between active and control groups.

What is the formula for absolute risk reduction (ARR)?

ARR = EER – CER or a/a+b - c/c+d

What is the formula for number needed to treat (NNT)?

NNT = 1 / ARR

In what studies may relative risk be used?

Prospective studies, like cohort or experimental

In what studies may odds ratio be used?

Retrospective studies, like case-control or cross-sectional

Whatis the formula for relative risk (RR)?

RR = EER / CER or (a / a+b) / (c / c+d)

What is the formula for odds ratio (OR)?

OR = (a/b) / (c/d)

What is a definition of relative risk reduction?

The ratio of risk difference between exposed and unexposed groups.

Whatis the formula for relative risk reduction (RRR)?

RRR = (EER − CER) / CER or 1 - RR

What is a Hawthorne effect?

When behavior changes due to being aware of being observed.

What is a definition of any given null hypothesis?

There is no difference between the groups.

What is a definition for Type I Error and how does it relate to significance?

Alpha. Rejecting the null hypothesis when it is true. By definition, can only be considered if a statistical difference is found.

What is a definition for Type II Error and how does it relate to significance?

Beta. Accepting the null hypothesis when it is false. Should be considered when a result is NOT significant.

What is a definition for sensitivity?

True positive rate. The proportion of positives that are correctly identified as such. Avoidance of false negatives.

What is the formula for sensitivity?

Sensitivity = TP / (TP + FN) also a / a+c

What is a definition for specificity?

True negative rate. The proportion of negatives that are correctly identified as such. Avoidance of false positives.

What is the formula for specificity?

Specificity = TN / (TN + FP) also d / d + b

What is a definition for Alpha?

False positive rate. Rejecting the null hypothesis when it is true. Type I error. p = Alpha

What is a formula for Alpha?

1 – specificity = 1 - TN / (TN + FP)

What is a definition for Beta?

False negative rate. Accepting the null hypothesis when it is false. Type II error. Power = 1 - Beta

What is a formula for Beta?

1 – sensitivity = 1 - TP / (TP + FN)

What is a definition for power?

Power is sensitivity; the proportion of positives that are correctly identified as such.

What is a formula for power?

TP / (TP + FN). Equivalent to sensitivity, or 1 - Beta.

What is a definition of p-value?

The probability of obtaining a result equal to or more extreme if the null hypothesis were true. The type I error rate is at most alpha.

What is a formula for p-value?

Data, a null hypothesis, and alpha level, a t- z- or f- test and a computer or a table.

What values of a confidence interval show statistical significance in prospective trials?

Any that does not include 0.

What is a definition of Kappa?

Measures inter-rater agreement for qualitative items that takes into account the agreement occurring by chance.

What is the range and interpretation of a Kappa value?

-1 to 1, -1 is a systematic disagreement, 0 is chance, and 1 is perfect agreement. Higher is better, meaning the raters are very similar. Not learning formula.

What test(s) for non-parametric ordinal or continuous data with one or two groups?

Mann-Whitney-Wilcoxon (U-test), Kolmogorov–Smirnov

When is Wilcoxon Rank Sum used?

Ordinal data with two independent samples.

What test(s) for parametric paired continuous data with one or two groups?

T-test

What test(s) for continuous non-parametric data with three or more independent samples?

Kruskal-Wallis

What test(s) for continuous non-parametric data in three or more paired groups?

Friedman

What are the numerical conditions for using Chi Squared instead of Fisher's Exact?

where n is at least 20 and frequency per cell at least 5. For more samples, each cell must have at least 1 and >20% at least 5.

What is a definition for incidence?

The number of new cases within a population in a time period.

What is a definition for prevalence?

The number of cases of a disease in a population at a given time.

What is the equation for positive predictive value?

A / (A + B)

What is a definition of positive predictive value?

The proportion of positive results that are true positive results.

What is the equation for negative predictive value?

C / (C + D)

What is a definition of negative predictive value?

The proportion of negative results that are true negative results.

How does prevalence relate to sensitivity, specificity, and positive and negative predictive values?

Prevalence can be used to calculate predictive values, but has no relationship with sensitivity or specificity.

What is the definition of per protocol?

Once randomized, only patients who adhere to protocol are reported in outcomes.

What is the definition of intention to treat?

All patients randomized are reported at the conclusion of the trial regardless of adherence or outcome.

How are delta and confidence intervals used to assess the null hypothesis in non-inferiority trials?

Delta is the largest clinically acceptable difference; the comparison treatment must be "not much worse" than the standard treatment. The confidence interval may pass below the effect of the standard treatment, but must not pass below delta or the comparison drug is not non-inferior.

What is the general p-value and confidence interval for a one-sided test?

p-value: .025


confidence interval: 97.5%

Is per protocol or intention to treat more appropriate for a non-inferiority trial?

per protocol is preferred as it is more difficult to show non-inferiority in this way. Both would be nice.

What tests for heterogeneity in meta-analysis? What statistic is used? What does it mean to reject the null?

Cochrane Q.


Uses Chi Square and a p value.


If result is less than p value, then reject the null, meaning there is too much heterogeneity to pool results at face value.



How can an over or under powered meta-analysis be studied for heterogeneity. What does the result mean?

Cochrane Q will not work well. Use I^2. O% is best, meaning chance alone. >50% is high heterogeneity.

What does a highly incohesive forest plot indicate?

High heterogeneity between studies. There may be considerations to take with the study targets or methods.

How is funnel a funnel plot made? What does it indicate if weighted to one side?

y axis is study size, x axis is effect result. Publication bias.

What is interval vs ratio data?

Ratio data has a true 0 meaning no amount (weight), whereas interval data does not (temp in farenheit).