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17 Cards in this Set

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Organic Chemistry
chemistry that specializes in the study of carbon compounds
Stanley Miller
set up closed system experiment to mimic conditions thought to have existed on early Earth, discovered that some organic molecules that are common in organisms were created
Valences
Basis for rules of covalent bonding in organic chemistry
Hydrocarbon
organic molecules consisting only of carbon and hydrogen, non-polar, hydrophobic
Adenosine triphosphate (ATP)
a nucleotide derived from adenosine, contains 3 phosphates bonded to each other, produced by cellular respiration, transports potential to react with water and release energy
Isomers
compounds that have the sane numbers of atoms if the same elements but in different structures with different properties
Structural Isomers
differ in the covalent arrangements of their atoms, may also differ in location of double bonds (straight and branched)
cis (same)-trans (opposite) Isomers
carbons have covalent bones to the same atoms, but atoms differ in spatial arrangements due to the inflexibility of double bonds,
Enantiomers
isomers that are mirror images of each other, differ in shape due to the presence of an asymmetric carbon (attached to four different atoms or groups of atoms) usually only one i biologically active
Functional Groups
affect by changing the molecular shape, or are directly involved in chemical reactions
Hydroxyl Group
-OH, differs from hydroxide ion, alcohols, polar, can form hydrogen bonds with water, helping dissolve organic compounds such as sugar, hydrophilic
Carbonyl Group
>C=O, carbon atom joined to an oxygen by a double bond, ketone if within carbon skeleton, aldehyde if is at the end, hydrophylic
Carboxyl Group
-COOH, oxygen double bonded to carbon, bonded to OH group, carboxylic acid, can donate H+ because covalent bond b/w O and H is so polar, hydrophilic
Amino Group
-NH2, consists of nitrogen atom bonded to two hydrogen atoms, Amines, acts as a base, can pick up a H+ from surrounding solution, hydrophilic
Sulfyhydryl
-SH, consists of a sulfur atom bonded to an oxygen, Thiols, two can react and form a covalent bond (cross-linking in protein), hydrophilic
Phosphate Group
(-OPO3)-2, phosphate atom bonded to four oxygen atoms, one of which is bonded to the carbon skeleton, carries negative charge, organic phosphates, contributes negative charge to molecule, molecules containing them have potential to react with water and release energy, hydrophilic
Methyl
-CH3, consists of a carbon bounded to three hydrogen atoms, methylated compounds, affects expression of genes if bounded to DNA, hydrophobic