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380 Cards in this Set

  • Front
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Infection
Possibility of causing disease

Presence of the microbe in a host to the benefit of the micro-organism.
Colonization
Presence of microbes in host but which does NOT result in clinical disease and may be needed for health.
T/F Bacterial colonization in the body necessarily causes clinical disease
False. there are good flora too! think about yogurt
Latent infection
involves persistence of microbe in host with possibility of disease in future without shedding of organism in the interval
What is an example of a latent infection (this is related to chickenpox)?
Example: Shingles from Varicella Zoster
Some examples of acute disease are ______ Some examples of chronic disease are ______
Infections may also be acute (cholera, influenza) or chronic (leprosy, hepatitis B)
Nonclinical infections
inapparent infections which can still cause transmission of a disease.

These can occur at the preclinical (prior to onset of disease)

subclinical levels (mild disease, so spreads without being aware of having the disease
Mary Mallon was famous for what disease and how did people respond?
She was known as Typhoid Mary. She was a cook who transmitted typhoid fever. She was eventually quarantined
Describe the typhoid fever carrier state
can occur with or without acute symptomatic infection 2-5% of infections More common in women Shed organism for years
Infectivity
The ability of the microbe to cause infection (enter, survive, multiply in host), but not necessarily cause symptoms
attack rate (for infection) =
# infected / # exposed This attack rate (usually based on clinical criteria) is used in epidemic investigation
Pathogenicity
the ability of the microbe to cause disease. …without regard for severity!
attack rate (for pathogenicity) =
# of clinical cases / # infected
Virulence
the degree of severity of disease produced.
Virulence attack rate =
Virulence attack rate = # of fatalities / # of diagnosed cases = to case fatality rate
Epidemic:
a sudden increase in the frequency of infection in a particular region.
Pandemic:
an epidemic on a global scale HIV infection is an example
Endemic:
an infection that occurs regularly at a stable rate in a particular region
Modes of Transmission Direct
Person-to-Person Contact
Modes of Transmission Indirect
Common Vehicle 1.) Single exposure 2.) Multiple exposure 3.) Continuous exposures Vector
Infections are transmitted from a reservoir

What are 4 common reservoirs?
Inanimate objects
asymptomatic human
symptomatic human
Another species
Reservoirs

Two examples of inanimate objects being reservoirs
Fomite
contaminated water
Reservoirs

Two examples of another species being reservoirs
Zoonosis
Vector-borne diseases (like mosquitos)
Food borne illnesses.
Two major ones.
Salmonella
Botulism
Crytosporidiosis is an example of a _______ illness
waterbourne
Airborne illness
Different size aerosols
Air borne Large particle aerosols

Small particle aerosols or droplet nuclei residual of droplets which have evaporated to < 5 microns
- May remain suspended in air for prolonged periods of time
Airborne illnesses

Diseases caused by large particle aerosols
Bacterial: Hemophilus influenzae, Meningococci Diphtheria, Pertussis, pneumonic plague, Mycoplasma pneumoniae

Viral: - Adenovirus, Mumps, Parvovirus, Rubella
Airborne illnesses diseases caused by small particle aerosols (droplet nuclei)
Tuberculosis
Measles
Varicella
Influenza
Vector borne illnesses

Description
Vectors are other living organisms which harbor microbe and transmit to susceptible host
Vector borne illnesses disease examples are:
Examples: malaria, dengue, yellow fever
Fomites. Definition and examples:
inanimate objects which are contaminated and spread infection.

Examples: the common cold, cold sores, conjunctivitis, coxsackievirus (hand-foot-mouth disease), croup, E. coli infection, fifth disease (“slap cheek”), Giardia infection, impetigo, influenza, lice, meningitis, pinworms, rotavirus diarrhea, RSV, and strep
Zoönosis
infection normally present in vertebrate animals but which can rarely spread and cause disease in humans. (Example: brucellosis)
Zoonosis

Why aren't we too concerned about zoonoses?
Person to person transmission is rare. Disease may be mild. Infection usually requires extensive exposure.
Describe the shape of a point source infection curve.
Increase to a peak and then decrease
Describe the shape of a continuous infection curve
Increases to a plateau
Describe the shape of a propagation infection curve
Wavelike appearance with each crest increasing. There is a maximal crest and then a series of decreasing crests
Statistical inference:
drawing conclusions for data using statistical methods to describe and arrange data and to test suitable hypotheses
Most scientific problems address whether there are __________ or _________ between variables
differences, associations


most scientific problems address whether there are differences or associations between variables
"null" hypothesis = ?

"research" hypothesis = ?

What are we trying to accomplish in most research studies?
no difference = “null” hypothesis

a statistically significant difference = “research” hypothesis (also called the alternative hypothesis)
- most research studies aim to reject the null hypothesis
null hypothesis:

What does this mean in terms of the predicted effect and the means of the treatment to the placebo?

How do represent the association?
predicted effect does not exist;

that is, the mean response to treatment being tested is equal to the mean response to the placebo in the control group;

both responses have a normal distribution with an unknown mean and standard deviation

For difference: mean 1 = mean 2

For association: r^2 = 0
Null hypothesis:

What is the equation in terms of means? Describe what the equation means in words.
H0: μ1 = μ2

(that is that mean for the intervention group will equal mean for control group)
Research hypothesis:

What is the equation in terms of means? Describe what the equation means in words.
H1: μ for intervention > μ for control group
What are the two variables found in studies?
Factors (Independent variable)

Outcomes (Dependent variable)
Which of these statistical calculations assume normal distribution?

t-test
Chi square
ANOVA
Chi-square and ANOVA
Type I error:
reject the null hypothesis when it’s really true;

goal is to keep Type I error as low as possible
Type II error:
say the hypothesis is null when it’s really not
How is the alpha level (α) related to type I and type II errors?
When we pick the alpha level, we set upper limit on probability of making an erroneous decision to reject the null hypothesis (type I error)
What is the typical alpha value that is chosen for studies?

We are aiming for ______ type I error.
α = 0.05

We are aiming for low type I error
degrees of freedom (df) =
degrees of freedom (df) = total n - 2

total n = total number of participants in the study
Once we have an alpha value, degrees of freedom and a calculated t value,

What do we do to determine whether there is statistical significance?
use the student’s t distribution table

- look for the t - value that corresponds to the alpha value and the DoF

-Statistical Significance if
calculated t-value > table t-value
T-Test

What does it mean if:

table t-value > calculated t-value?
we cannot reject the null hypothesis; that is our t is not rare enough and our p value is not small enough
p-value:

Is the probability that...
probability that difference between groups during an experiment happened by chance or sampling error;

is the probability (0 to 1.0) of the sample statistics, given the samples size and assuming the sample was derived from a population in which the null hypothesis is true
T/F P-value tells you whether or not the results are important
False:

p-value does not tell you whether the null hypothesis is true or not but instead it is a probability- it tells you if your t is rare
What is the equation for power?

What does this means in terms of the two types of errors?
power = 1-β and is the probability of rejecting the null hypothesis when it’s false
How can we increase power?
- you can increase the power by increasing α (making it less stringent), making more room for error to capture more t’s but at the same time increasing chances of making a Type I error
Increased power leads to an increased chance of making a _______ error.
Type I error
T/F Virtually any study can be shown to be significant by using a big enough sample size
True
We can increase the power by increasing the ______ because small samples have “flukiness” and more sampling error which equals _______
sample size,

larger p value
What is the purpose of a standard error as it relates to the sample statistic?
standard error is related to the precision of sample statistic- we can express our confidence in our mean by calculating standard error
SE gets _____ as the SD increases and _____ as n increases
larger

smaller
SE
SE = SD/ sq. rt (n)
What does a large SE of the means indicate?
a large SE of means says that there’s a lot of variability between sample means;

that is, we don’t have confidence that our estimate (mean) equals the population
As n increases what happens to the means and the SE?
as n is increased, we get more and more stable means (smaller and smaller SE)
As n increases what happens to the probability that you will get a statistically significant mean?
Increases
What is the value of calculating power prior to the start of the study?
Knowing the power allows you to pick the proper n for the study
Confidence intervals

If the confidence interval for a risk interval crosses one, is there statistical significance?
No

- if the null hypothesis is that the odds ratio = 1 (no difference), then a 95% CI range that includes 1 means no statistical significance while a 95% CI range that does not include 1 means statistical significance
Confidence Intervals

If the null hypothesis is that the difference in the means is 0, what must be true about the CI if we want to reject the null hypothesis of no difference?
The CI cannot include 0
What is the difference between clinical and statistical significance?
it’s important to note the difference between statistical significance and clinical significance; to determine clinical significance, we want to know if the effect (shown to be statistically significant) is enough to make a real-world/practical difference
What measure is typically used to determine clinical significance?
effect size:

the observed and standardized measure of the magnitude of the observed effect
Effect size:
the observed and standardized measure of the magnitude of the observed effect
Cohen’s d (an effect size) =

How do we interpret the Cohen's d value?
(mean1 – mean2)/SD pooled

- an effect size of 0.2 is a small effect
- 0.5 a medium effect
- 0.8 or higher a large effect
Cohen's d, small effect value
0.2
Cohen's d, medium effect value
0.5
Cohen's d, large effect value
0.8 or higher
Why is the effect size important for studies?
effect sizes help address stability of effect across studies: helps scientists collectively move forward with the business of science
T/F A result that is rare is necessarily significant
False
T/F A p-value above 0.05 means the research is not valuable.
False. It is possible that the sample size was not sufficient.
T/F Scientists are more likely to put more credibility in a lower p-value
True

BUT REMEMBER
- don’t base your belief in something because of a low p value
T/F Just because results are statistically significant means that they are important
False
_____ or ______ is responsible for ALL mean differences
chance or sampling error is responsible for ALL mean differences.
weak positive correlation-
as x ↑, y ↑ but weak correlation
strong negative correlation
as x ↑, y ↓
perfect positive correlation
for every degree x increases, so does y
Pearson Correlations
Requirements
1. random selection of sample
2. normality of traits measured
3. at least interval level measurement
4. similar variation in x and y scores (assume that x and y distributions are normal, not skewed)
5. linear relation between x and y
Describe the range of the Pearson's coefficient
Pearson: r value ranges between -1 (a perfect negative relationship) to 0 (no relationship) to +1 (a perfect positive relationship)
Pearsons Coefficient (r)

(+ or -) 0.8-1.0
very strong relation
Pearsons Coefficient (r)

(+ or -) 0.6 -0.8
strong relation
Pearsons Coefficient (r)

(+ or -) 0.4-0.6
moderate relation
Pearsons Coefficient (r)

(+ or -) 0.2-0.4
weak relation
Pearsons Coefficient (r)

(+ or -) 0.0-0.2
little or no relation
What does r^2 (coefficient of determination) tell you
r^2 (coefficient of determination) tells you the percentage of shared variability (the strength of the association in proportion of variation in y explained by x)
- the higher the coefficient of correlation, the more you can explain x by y

*remember that correlation does not equal causation
T/F Correlation = Causation
False
T/F Pearson's correlations do not allow us to determine causation
True.

** it’s important to remember that Pearson correlations help determine a relationship between 2 variables but does not allow us to determine causation**
Ordinal tests require ________ tests

why?
nonparametric

data that’s ordinal requires nonparametric tests because with ordinal data, we don’t understand how much one scale point is different from another
T/F Nonparametric tests do not assume a normal distribution
True
Spearman Rank
a commonly used nonparametric test is the Spearman Rank correlation which is a nonparametric alternative to Pearson’s r that makes no assumptions about the populations mean or standard deviation
Data is ordinal and does not follow a normal distribution.

Spearman's or Pearsons?
Spearman's Rank correlation
Data follows a normal distribution.

Spearman's or Pearsons?
Pearsons correlation
Spearman's Rank correlation

What are the requirements
1. random selection of sample
2. both distributions of scores are in ordinal form (may have been converted by making continuous variables into categories)
3. linear relation between sets of scores
Spearman's Rank Correlation

What are the steps in determining correlation?
- computed “obtained” test statistic value (rs) is calculated and then the “critical” value of the test statistic (rcrit) is derived from a table

- rs is compared to rcri and:

- if absolute value of rs is greater than rcrit, reject the null hypothesis

- if absolute value of rs is smaller than rcrit, then fail to reject the null hypothesis
Chi-Square Test
Requirements:
1. randomly select samples
2. nominal level of measurement
3. independent cell entries (each participant can only be in 1 cell)
4. no expected cell frequency below 5 (assume 5 incidences in each cell)
Chi-Square Test

Cell frequency 3

Can we run the Chi-Square?
No.

no expected cell frequency below 5 (assume 5 incidences in each cell)
Assumptions of a Chi-Square test:
H0: fo = fe
Ha: fo ≠ fe
Steps in performance of a Chi-Square test:
1. then determine degrees of frequency: df = (# of rows-1)(# of columns-1)

2. using df and the α level you choose, get critical chi from a table

3. calculate chi for the data

4. compare chi calculated to chi critical
Chi-Square Test:

What is our interpretation when the
chi calculated > chi critical?
- if chi calculated is larger, then reject the null and conclude that the variables are not independent
the n you choose depends on 4 other values:
1. significance level, α (usually 0.05)

2. desired power (usually 80-95%) [power is the probability of rejecting the null when the null is not true]

3. variability of the population(s), σ’s

4. amount of change, Δ, from H0 (null) that we realistically want to detect
sample size required for a study is increased by what changes in the following?

alpha
power
standard deviation
delta
smaller alpha

larger power

larger standard deviation

decreases in delta (the changes we want to detect)
randomization:
randomly assigning each participant to a treatment group
How do we use randomization in clinical trials?
Used to reduce bias

used in clinical trials for internal validity by reducing bias (ex: having more people with a similar characteristic in 1 group than another group)
How do we use randomization in interventional studies?
Used to average out confounding bias

in intervention studies, we have the opportunity to select which subjects get which treatment- by randomly assigning subjects to treatment groups, we hope to average out the effects of confounding variables
T/F Randomization doesn’t guarantee a perfect balance among confounders;
True;

however, for reasonably large n’s, it’s unlikely that serious imbalances will occur
Name two situations where randomization isn't possible
when studying the difference between men and women

when randomization would be unethical
HIV Pandemic showed us the ______ systems are important warning systems
surveillance
HIV Pandemic

What is the common cause mode of transmission in males? females?
males - male-male
female - high risk heterosexual activity
How can the prevalence of HIV be increasing while incidence remains stable?
- duration of HIV is increasing due to improved treatment (HIV pts are living longer with the disease)
The upper respiratory tract is capable of removing particles greater than _____
4-5 microns
Epidemic Curves

Latent Period (Definition)
time between infection and when it can be spread to others
Epidemic Curves

Incubation Period (Definition)
time between infection and when symptoms appear
Epidemic Curves

What is significant about the timing of the latent period and incubation periods?
Latent period starts earlier than the Incubation period


This allows the infection to spread to individuals prior to when the symptoms start to appear
Epidemic Curves:

Point Source Infections appear _____ skewed
Positively
Epidemic Curves:

The gaps between the peaks on the curve of a propagated infection indicate the _______
incubation period
Epidemic Curves:

Propagated infection refers to ________
Transmission of infection from person to person
Multivariable Models
have more than 1 independent variable AND 1 dependent variable
Multivariable Models

multivariate models (MANOVAs)
are models with more than 1 independent variable and more than 1 dependent variable
Multivariable Models

Requirements for multivariable models:
1. random selection of samples

2. normality of traits in population

3. homogeneity of variance

4. at least 1 independent variable (nominal or ordinal) with 3 or more “levels” (which is the only distinction between multivariable models and t-tests)

5. one dependent variable (interval or ratio level)
Multivariable Models

Regression Models:
are models with an independent variable that’s either interval or ratio (not nominal) and the dependent variable is also interval or ratio
ANOVA
are defined by the number of independent variables (with 3 or more levels)
ANOVA

a simple or one-way ANOVA has ________
1 independent variable
ANOVA

factorial ANOVA:
designs with more than 1 independent variable
two-way ANOVA
has 2 independent vaiables

- ex: dosage groups with 3 levels and age groups with 4 levels- this would be called a 3x4 ANOVA
- three-way ANOVA
has 3 independent variables

- ex: 3 levels of dosage, 4 levels of age, and 3 levels of weight- this would be called a 3x4x3 ANOVA
repeated measures ANOVA:
where dependent variable is measured multiple times (time is an independent variable- longitudinal)
analysis of covariance (ANCOVA):
where dependent variable is corrected based on covariates (control for impact of potential cofounder)
How are the t-test and ANOVA related?
ANOVA is really just a mathematical extension of the t-test

- t-test has 2 levels of independent variables while ANOVA has more than 2 levels of independent variables
ANOVA is an "omnibus" test. What does this mean?
it tells you whether there are any significant differences between ANY of the means, but does not tell you which pairs had significant differences
What kind of test usually follows an ANOVA?
another type of test called a “post hoc” test must be done
in combining probabilities, if the events A and B are mutually exclusive

A = 0.4
B = 0.3
P(A or B) = P (A) + P (B)
= 0.4 + 0.3 = 0.7
say your chance of surviving a year after a diagnosis of prostatic cancer is 80% and that the chance of surviving 2 years is 60%- given that you’ve survived 1-year, what’s your chance of making it to 2 years?
A = “survive 2 years”
B = “survive 1 year”
P (A|B) = 0.6/0.8 = 0.75 (75%)
Decision Trees
can be described as a graphical aid to keep track of probabilities, both conditional and otherwise
Independence

When A and B are independent then P (B|A) = ???

Meaning
P (B|A) = P (B|A*) = P(B)

- that means that the probability of B is the same whether you know that A is true, that A is not true, or you don’t know anything about A at all
Multiplication Rule

A box has 5 black balls and 5 white balls. The chance of picking 2 black balls is
5/10 * 4/9 = 20/90 = 2/9

second number is 4/9 because there is one less black ball to pick from (4) and consequently one less ball to pick from overall (9)
The responsibility of the health of the US population falls under control of the _________
state government
What organization is responsible for the health of the US population when there are interstate implications for a health situation such as an outbreak?
Centers for Disease and Prevention (CDC), which is part of the Department of Health and Human Services
In an outbreak that effects multiple states, what is the relationship between the states and the CDC?
The states report data to and request assistance from the CDC
Cases can be first noted or identified by _______ or ______
astute clinicians

surveillance
What do you call the first case identified by surveillance?
The "Index case"
An index case may represent a _______ that is, when investigated, more cases are found and a need for public health action is determined
"sentinel" health event
Surveillance's main purposes
As an early warning system

prompt identification of shared exposures in order to prevent additional cases
The Paradox of Public Health:
The problem is that we only care about public health when it fails;

When public health infrastructure is working well, it appears like a waste of resources
The following paragraph describes what epidemiological concept?

Tuberculosis was very well-controlled in the US until the 1970s when government decided to cut back on funding; there was a huge surge of TB outbreaks (esp associated with HIV); then the need for public health initiatives was recognized and in the mid 1990s TB cases declined again
The Paradox of Public Health
Surveillance is targeted to the level of ____________ and is an _____ _____ prevention method
Surveillance is targeted to the level of populations and is an indirect primary prevention method
Who generally handles surveillance?
State public health agencies
What are the four main components of Surveillance?
1. case reporting (physicians report to state agency)

2. data analysis (done by the state public health agency)

3. communication of results (state agency informs physicians about outbreaks so that they are more vigilant)

4. application of findings (usually by physicians)
Surveillance - who is responsible?

Case reporting
physicians report to state agency
Surveillance - who is responsible?

Data analysis
Done by the state public health agency
Surveillance - who is responsible?

Communication of results
state agency informs physicians about outbreaks so that they are more vigilant
Surveillance - who is responsible?

Application of findings
usually done by physicians
What is a brief way to define surveillance?
information for action
Life cycle of Disease Prevention and Control
Surveillance -> epidemiological research -> applied research -> prevention methods - (back to)> surveillance

Epidemiological research is also linked to prevention methods
Public Health Surveillance Loop
Physicians report to the health agencies who analyze the data and return summaries, interpretations and recommendations to physicians and the general public
Bioterrorism requires that we have a good _______ _______ _____ for preparedness and good ______ _____
Bioterrorism requires that we have a good public health system for preparedness and good surveillance systems
How are cases in bioterrorism usually reported and what does this mean?
syndromic case-reporting

- case reports describe a constellation of symptoms (syndrome)

This is done because bioterror agents are rare and therefore diagnosis of a specific disease can be difficult
CDC Category A Diseases/Agents for Bioterrorism:

what are the four major features of these diseases?
- “high-priority agents include organisms that pose a risk to national security because they:

- can be easily disseminated or transmitted from person to person
- result in high mortality rates and have potential for major public health impact

might cause public panic and social disruption

- require special action for public health preparedness”
CDC Category A Diseases/Agents for Bioterrorism:

what are the 6 Cat. A diseases/agents?

***KNOW***
1. anthrax
2. botulism
3. plague
4. smallpox
5. tularemia
6. viral hemorrhagic fevers (both filoviruses like Ebola and Marburg and arenaviruses like Lassa and Machupo)
Important Attributes of Surveillance Systems
Simplicity
flexibility
Data Quality
Timeliness
Acceptability
Sensitivity
Positive Predictive Value
Stability
Representativeness
Important Attributes of Surveillance Systems

Why is simplicity important?
a simple form that is easy to complete helps to increase compliance
Important Attributes of Surveillance Systems

Flexibility
flexibility: able to respond to changes (esp if there’s social disruption)
Important Attributes of Surveillance Systems

Reliability
must be valid, reliable, and standardized (so can compare with past data)
Important Attributes of Surveillance Systems

Timeliness
must report quickly, analyze quickly, and get information back to physicians quickly
Important Attributes of Surveillance Systems

Acceptable
everyone is willing to participate
Important Attributes of Surveillance Systems

Do we want low or high sensitivity?
want high sensitivity (like in screening tests) even at expense of specificity
Important Attributes of Surveillance Systems

Do we want high or low false positives? why?
don’t want a lot of false positives because would trigger system for unnecessary reasons and waste money
Important Attributes of Surveillance Systems

Stability
esp if there’s social disruption
Important Attributes of Surveillance Systems

- representativeness
need to report across various groups in a population (rich, poor, all ages, all races, insured and uninsured, homeless, etc.)
Types of Surveillance

Describe passive surveillance. What are some features and problems of passive surveillance
passive: physician, infection control personnel (ICP), or lab reports cases as prescribed by state or local law without prompting

- problem: physicians are highly noncompliant

- features: provider-initiated, less complete, less labor, cheap
Types of Surveillance

active or stimulated: Define, compare to passive surveillance, features
active or stimulated: same as passive but also have regular examination and prompting done to ascertain presence or absence of cases

- results in better compliance
- features: Health Department-initiated, more complete, labor intensive, expensive
Types of Surveillance

T/F Active or stimulated surveillance is cheaper than passive surveillance
False.

Since active or stimulated surveillance often is Health Department-initiated, more complete, and labor intensive, the cost is usually higher than in passive surveillance
Who is required by state law to report Disease under penalty of law?
Licensed practitioners and labs
What is the problem with licensed practioners and labs when it comes to reporting disease?
penalty laws are rarely enforced
T/F Most cases of reportable disease are not reported
True
CSTE and CDC list of reportable Diseases

Category 1 - time to report is ____

report to?
24hrs

Category 1: reportable to local public health department within 24 hours of diagnosis
- ex: botulism
CSTE and CDC list of reportable Diseases

Category 2 - time to report is ____

report to?
1wk

Category 2: reportable to local public health department within 1 week
- ex: cryptosporidiosis
CSTE and CDC list of reportable Diseases

Category 3 - time to report is _____

report to?
1wk

Category 3: reportable to local WV Bureau of Public Health (State Health Department) within 1 week of diagnosis unless otherwise noted
- ex: HIV/AIDS must be reported to the state (not locally) within 30 days
What is true reporting of diseases in WV?
- in WV, not all reportable diseases are infectious
- ex: elevated lead, birth defects, cancer, hemophilia, etc.
- in WV, reporting is required by law and failure to report results in fines (but this is rarely enforced)
- in WV, for some diseases, may need to fill out supplemental forms for CDC and WVBPH
What is the general rule in the reporting of diseases?
More severe, rarer diseases are more likely to be reported than less severe, more common diseases
International health regulations require mandatory declaration of what diseases to WHO?
Cholera, plague, and yellow fever
Steps in Epidemic Investigation
1. establish the diagnosis** (most important)- only trust your own eyes to get credible information

2. establish a case definition
- a very operational definition which can identify cases easily and quickly, not a definition based on serological studies that take long time to get results

3. is an epidemic occurring?

4. characterize by person, place, and time

5. develop hypotheses regarding spread of disease

6. test hypotheses

7. initiate control measures

8. follow-up
Food-caused illnesses often cause this kind of epidemic.
Point Source Epidemic
Attack rates for determining which foods caused the disease.

What two calculations should be done?
attack rate for eating x = # of people ill that ate x / total # of people who ate x

attack rate for not eating x = # of ill that did not eat x/ total # of people who did not eat x

attack rate for eating x – attack rate for not eating x = difference in attack rates
Attack rates for determining which foods caused the disease

The food with the highest positive difference in attack rates is usually the ______
cause of the outbreak

there are some exceptions - make sure that the numbers make sense in the context of the whole table

Recall in our example that barbecued chicken and cola had the highest attack rates, but cola was a confounder
What is the equation for the basic reproductive number?
Ro = c x p x d

c: number of contacts per unit of time
p: probability of transmission with contact
d: duration of infectiousness (in units of time)
T/F Ro varies with populations, behavior, time, and other factors
True
T/F Ro only accounts for the first spread of disease and does NOT account for secondary transmissions
True, subsequent infections are NOT included in Ro
If we want to control infections we should try to keep Ro ______
below 1

if Ro <1, then 1 person is spreading the disease to less than 1 other person on average
T/F Ro gives us an indication of the period between the spread of disease
False

Ro tells us nothing about how long this takes (since the units of time cancel out in calculating Ro)
What is a unique situation where Ro falls below one?
Ro usually falls below 1 when the pool of susceptible people “runs out” because they all get the disease
Describe the characteristics of an epidemic in terms of time when Ro is high
if Ro is high, then there’s an explosive spread of the disease which depletes S (the pool of susceptible people) just as quickly so it dies out quickly- shorter epidemic
Describe the characteristics of an epidemic in terms of time when Ro is low
- if Ro is low, then have longer epidemic
T/F Kid 1 doesn't have any symptoms of a disease. He is unable to pass the disease along to one of his friends
False

- it’s important to note that the infectious period proceeds the symptomatic period (this is necessary for successful propagation of the organism)
What are the three main things we can do to control infections?
Environmental measures

Prompt investigation and management of outbreaks

Vaccinations
What is the #1 thing that you should always remember to do to help curb infection control in the Health Care Setting?

***KNOW***
hand-washing is the single most important/effective tool for disease control in the healthcare setting
What are some ways we can help control infection in the hospital setting?
Handwashing
Appropriate attire
Appropriate use of antibiotics
Reduce use of invasive devices
Surveillance systems
T/F Doctors have a high compliance when it comes to handwashing
False
Quarantine

Two major features
:restriction of activities on the basis of exposure
another important feature of quarantine is early detection of disease
Quarantine

Two major forms
2 forms:
- absolute or complete: no contact whatsoever
- modified: partial restriction in activities

- ex: a single man brought SARS to Toronto from Singapore and 100’s became ill; many health workers were put in modified quarantine- they were told to stay at home, wear a mask when they were around their families, and to take their temperatures twice a day (early detection of disease)
Absolute Quarantine
No contact whatsoever
Modified Quarantine
modified: partial restriction in activities
Isolation
restriction of activities on the basis of infection until infectious period has passed
- usually specific to mode of transmission
The difference between Isolation and Quarantine is?
Isolation - person is infected

Quarantine - person may/may not be infected (they may have been exposed)
The purpose of vaccines it to provide herd immunity. What does this mean?
With a high proportion of immune individuals the spread of disease is minimized and the individuals who are susceptible are protected by the immune individuals (are “free riders”)
T/F Vaccinations are individual-level efforts to keep Ro low
FALSE

- vaccinations are population-level efforts to keep Ro low
Disease Eradication

Incidence of the disease

Types of disease that can be eradicated
is the permanent reduction of a disease to 0 incidence

- only infectious diseases can be eradicated
WHO definition of eradication.
elimination is reducing a condition to lowest feasible levels

preventive measures are no longer needed

usually eradication involves a non-sustainable campaign where lots of money is gathered to eradicate a disease
The only disease to have ever been eradicated is _____ and it was the ___ WHO eradication effort
smallpox,

5th
What are some factors that must be considered before attempting to eradicate a disease?
- non-human reservoirs make eradication almost impossible
- ex: cholera is impossible to eradicate because its reservoir is water
- simple measure (vaccination, filtering water, etc)
- disease is easily identified
What characterizes a vaccine that can be used for eradication?
- safe for all age groups
- effective
- single dose
- stable in field conditions (don’t need to refrigerate)
- inexpensive
Currently the WHO is trying to eradicate ____
polio
Dr. Martin thinks this horrible disease will be the next to be eradicated.
Dracunculiasis (Guinea worm disease)

where a worm found in fresh-water crustaceans is taken in by drinking, the crustacean dies but the worm lives and travels down to the human’s foot where it burrows out
How can we prevent the drinking of the worm that causes dracunculiasis?
drinking in this worm is easily prevented: can filter water through cheese cloth which removes the crustacean, can boil water which kills the organism, or can use larvicide to kill
What are some new emerging infectious diseases?
- HIV
- SARS
- Ebola
What are some old infectious diseases that are reemerging?
TB
antibiotic resistant bacteria
What are three host factors that make us more susceptible to emerging infectious diseases?
more immuno-compromised people

international travel

behaviors
What are three environmental factors that are making us more susceptible to emerging infectious disease?
Competition for land which brings us into closer contact with farm animals

Globalization

Breakdown of public health systems
- such as reduced vaccination
What are two factors in agents that are increasing our risk of emerging infectious diseases?
Development of antibiotic resistance

Ability to mutate
Definition of Injury
“damage to an individual due to energy exchange or from acute disruption in the normal body energy process”
- excessive transfer of energy can be mechanical (75%), electrical, chemical, thermal, and radiation
- mechanical injury includes motor vehicles (31% of all injuries), firearms (22%), falls (8%), and other forms (13%); the remaining 25% of injuries are results of other types of energy transfer
Injuries

Are they accidents?
Are they random?
are not accidents

are predictable (not random) events that are preventable because they have known risk factors
Injuries

2 classifications
Intentional

Unintentional
What are some examples of injuries resulting from acute disruption of a normal energy process?
Drowning, near drowning
asphyxiation, CO
poisonings, ingestions
Injuries were the leading cause of death for what age groups in 1945 and 2004?
1945 - ages 1-24
2004 - ages 1-44
What is striking about the incidence of injury and lifetime cost due to injury when we compare the years 1985 and 2000?
Incidence of injury dropped 12%

lifetime cost due to injury has increased 158%
What are some ways we can look at injury cost data?
incidence counts and rates

fatal, hospitalized, nonhospitalized
lifetime productivity losses medical costs
total lifetime costs age and sex
body region injured mechanism of injury
nature of injury
The 3% decrease every 5 years in injury fatality rate since 1910 indicates what?
The drop in injury fatality rate parallels the decreases seen in chronic diseases that were more commonly fatal during the earl 20th century (influenza/pneumonia, TB, gastroenteritis)
T/F New chronic disease are making the deaths due to chronic disease rise
True. AIDS is one example
Who were the "parents of injury epidemiology"?
- the parents of injury epidemiology were William Haddon, who worked for highway safety, and Susan Baker, author of Injury Fact Book
What are the four steps in the public health approach to injury?
1. surveillance

2. risk factor identification

3. intervention evaluation

4. implementation
What is the ultimate goal of the public health approach to injury?
to change policy to change human behavior
What are the 3 phases of injury?
pre-injury: control of energy source lost

injury event: injury is transferred to people, causing damage

post-injury: regain physiological homeostasis and repair damage
Pre-injury
control of energy source is lost
injury event
injury is transferred to people, causing damage
post-injury
regain physiological homeostasis and repair damage
The host agent and environmental factors determine what in an injury?
Determine the loss of control which leads to injury, the extent of injury, and the degree of recovery
Injury as it pertains to the epidemiological triangle

Agent?
Vector?
Agent is the source of energy that caused the injury

Vector can transmit energy from the agent to the host
What can we do to reduce the likelihood of an injury event?
prevent or limit energy buildup

control circumstances of energy use to prevent unintended release

modifiy energy transfer to limit damage

Improve emergency, definitive, and rehabilitative care to affect recovery
What is Haddon's Matrix?
- takes the applied temporal factors into account with the epidemiological triangle

- was originally used to create highway safety measures: safer vehicles, safer roads, safer occupants, significant reductions in vehicle deaths per miles driven

- since 1972 (the matrix’s creation), Haddson’s matrix has been applied to both intentional and unintentional injury control
What is the practical use of Haddon's matrix?
Haddson’s matrix has been applied to both intentional and unintentional injury control

- useful for planning, resource allocation, and preventive strategy identification
injury control:
reducing frequency of injury and/or reducing impact from injury
injury prevention (primary prevention
preventing an injury from occurring in the first place
acute care (secondary prevention):
improving the medical response to an injury to help limit the amount of damage
rehabilitation:
improving the outcome from injury and decreasing disability

- often education, law, and technology are used together to help control and prevent injury
Rehabilitation:

Out of education, law, and technology, which one is the most important?
- of these 3, technology is the most important but it’s also very expensive and time-consuming to develop
Injury prevention strategies

education
reduce unsafe behaviors and promote safe behaviors
Injury prevention strategies

legislation
laws and policies to promote safety, remove unsafe products or punish unsafe behaviors
Injury prevention strategies

engineering
making the environment and products safer through design and manufacturing improvements; minimize human involvement (thus minimize error)
What are some past injury control successes?
- injury control successes include seat belts, auto safety, roadway design, bike helmets, smoke alarm programs, and graduated license programs
Challenges to Injury Control

ATV
- even though bike deaths are decreasing due to access to safer places to ride bikes and to use of helmets, ATV deaths are increasing
Challenges to Injury Control

Gun Control
gun control: guns are faster, more efficient, and have more rounds; they are also easy to obtain

*death from firearms is considered a U.S. epidemic
Challenges to Injury Control

Impaired driving
- 30-35% of automobile fatalities are due to DUI’s
- elderly driving also raises issues- should the elderly have to take a license exam every year?
Role of the Practitioner in Injury Control

What can we do?
- identify injury problems
- design and evaluate interventions
- counseling and education
- media interactions
- legislative advocacy
ATV

Characteristics
300-600 lbs; oversized, low-pressure tires; straddle seat; operator must be “rider-active”; handle bar for steering; motorized, gas-powered; increasingly larger engines and speeds up to 100 mph;
ATV

Intended Use

Practical use
intended for use off-road and on non-paved surfaces

are important part of WV culture: farming, mining, other occupations, hunting, competitive riding, and recreation
T/F More than one third of ATV deaths in the last 2 years in WV are due to DUI
True. 35% of ATV deaths in the last 2 years in WV are due to DUI
T/F It is legal to use an ATV on any road with any center line markings in WV
False. It is illegal
ATV

What kind of intervention is described below?

Make ATVs safer, educate on wearing helmet and not driving when drunk, and outlawing the use of ATVs on roads and highways
Pre-incident (primary prevention)
ATV

What kind of prevention is described below?

Don't carry passengers while riding on an ATV
incident (secondary prevention)
T/F The typical passenger victim in an ATV accident is a 12-14 year old female
True
T/F People typically do not wear helmets while riding an ATV
True
Why are children more likely than adults to have a head/neck/spine injury in an ATV accident than adults?
Because they are thrown out of the vehicle
Describe the Public Health Burden of ATV injuries in terms of YPLL
YPLL (based on 75, not 65) for males is 37 years and for females is 54 years

(this means the average age of death in males from an ATV injury is 38, while it’s 19 in females)
What makes ATV injuries quite costly to taxpayers?
- 1/3 of people injured by ATVs are insured by Medicare or Medicaid, a significant burden to taxpayers
What are the three objectives for Healthy People 2010 pertaining to ATVs?
Pass helmet law for youth and adults

Reduce death rates

improve injury surveillance
WV 2007 Strategic Highway Safety Plan
- reduce fatalities by 20%
- expand helmet law, require liability insurance
- require training
- develop crash tracking system
What was the only successful legislation passed in WV on ATV safety?
in 2004 legislation was passed pertaining to where ATVs can be ridden, passengers, helmets for kids, training, penalties, and local government authority
ATV

Who can educate individuals about ATV safety?
- adults and parents can lead by example and use common sense

community provides DMV safety awareness course, school education, healthcare education, and 4H education

parents should supervise their children, ensure helmet use, ensure training, understand and explain the risk, and use common sense (which unfortunately can’t be legislated)
ATV

Who is ultimately responsible for the safety of the ATV rider?
- the responsibility for careful operation rests almost entirely on the ATV rider
demography:
scientific study of the determinants and consequences of population trends (mortality, fertility, migration)
Our population has reached 6 billion when has most of the population growth occured?
In the past 200 years
Who brought up the issue of the population explosion?
Paul Ehrlich,

a population biologist, wrote The Population Bomb, bringing attention to the issue of the population explosion
What is the equation for the natural increase in population?
Natural increase = birth rate - death rate
Why is the population of the world growing despite the fact that both birth rates and death rates are declining?
Death rates are lower than birth rates
Over 90% of the population increase in the 20th and 21st century is occuring in the ______
less-developed world
What is the Law of 70?
if a population is growing at a constant rate of 1% per year, it can be expected to double approximately every 70 years
If the population is growing at a rate of 0.5% per year what is the doubling time?
140 years
What did Malthus propose about populations in his Essay on the Principle of population?
population tended to grow geometrically (exponentially) while the means of subsistence (food) grew only arithmetically (this is now known as the “Malthusian Trap”)
What are Malthus's postulates?
1. food is necessary to the existence of man

2. the passion between the sexes is necessary and will remain nearly constant

- the power of population is indefinitely greater than the power in the earth to produce subsistence for man
Malthus's postulates

Since there is tension between the growth of the population and the means of subsistence, _____ would serve as a positive check on population growth
mortality
Malthus's postulates

Solutions to the population growth/Subsistence problem
preventive checks via birth control through

1. abstinence from sex outside marriage

2. later age at marriage
What major period of time allowed for transition from linear to exponential growth of subsistence?
Industrial revolution.
Demographic transition framework
demographic transition framework illustrates population growth in terms of discrepancies and changes in 2 crude vital rates: mortality and fertility (it ignores migration)
reasons for measuring health and ill-health:
- disease/injury prevention
- health promotion
- health services planning
- program evaluation
crude death rate (CDR):
CDR = (number of deaths/midyear population) x 100,000
crude birth rate (CBR):
CBR = (number of births/midyear population) x 100,000
Demographers typically express rates per ______

Epidemiologists typically express rates per _____
Demographers: rates/1,000

Epidemiologists: rates/100,000
What is true when we compare Crude Birth Rate and Crude Death Rate?
the CBR is more “crude” than the CDR because we are all at risk of dying but we are not all at risk of giving birth
Demographic Transition

pretransition stage:
pretransition stage: both birth and death rates are high but birth rate is constant while death rate fluctuates; sometimes there is a net increase, sometimes there is a net loss
Demographic Transition

transition stage:
- transition stage: mortality rate drops while there’s a lag in the drop of the birth rate so there are major discrepancies between the 2 (large rate of natural increase)- this is a population explosion

- developed countries have gotten through this stage and into the post-transition stage
Demographic Transition

post-transition stage:
post-transition stage: both birth and death rates are low but death rate is constant while birth rate fluctuates

- during this stage, perhaps human beings are in a better position to control their fertility
What are the four "perspectives" on Demographic Transition?
Description
Classification
Explanation
Prediction
T/F Demographic Transition is poor at explaining and good at predicting
True
immigration:
permanent moves in across natural boundaries
emigration:
permanent moves out across natural boundaries
Brain Drain
describes movement of educated people from less developed countries to more developed countries (like the US)
T/F In the US immigration exceeds emigration
True
a great paradox: as mortality rates declined over time what happens to the proportion of younger and older people and why?
as mortality rates declined over time, this made the population younger, not older because the big beneficiaries of the mortality decline are the young
infant mortality rate =
infant mortality rate = # of infant deaths/# of live births
Describe family size in a transitional stage such as the Victorian Era.
- large families were characteristic of Victorian England not because the culture was concerned with having large families but because it was a transitional stage: kids were being born and surviving unexpectedly (the people were used to 50% or more of children dying before the age of 8 which is what happened in the pretransitional stage)
Describe family size in a pretransitional stage.
pretransitional stage did not have large families (had many children but died in childhood)
Why was the female infant mortality rate much greater than the male infant mortality great in India (year 2000)?
There is a strong preference for male infants -

female infant neglect > male infant neglect
What are the two ways that age-pyramids can be graphed?
1. in absolute numerical terms
2. in percentage distribution (better because gives comparability across time and space)
Age Pyramids

What are we comparing?
1. variation across age groups
2. variations within age group by sex
Describe the shape of an age pyramid for less developed regions.
pyramid for less developed regions have a wide base which means high fertility rate so high rate of population growth
Describe the shape of an age pyramid for more developed regions
more developed regions have a narrow base which means low fertility
Age pyramids are a cross section of data from 1 year and as a result they count _______
immigrants
Bumps in a pyramid can reflect what?
Wars can reduce male populations

Bias. such as immigrations of males into the United Arab Emirates
What were the major causes of the death in the early 1900's?
communicable, infectious diseases
What are the major causes of death today?
Chronic diseases
T/F Life expectancies have increased in most parts of the world
True
What are the four stages of the epidemiological transition?
1.) Pestilence and Famine

2.) Receding Pandemics

3.) Degenerative and Man-Made Diseases

4.) Delayed Degenerative Diseases and Emerging Infections (Hybristic)

(see page 46 of Allison's SG for diagram)
What were some of Thomas McKeown's conclusions about the population explosion?
modern medicine had little to do with decrease in mortality rates

showed that decreased death rate trends preceded effective therapies

the industrial revolution and increased affluence (not clinical medicine) were responsible for rising life expectancies
Life expectancy is calculated on basis of ____________ but has long-term implications
Cross-sectional data
Public health measures developed in the West have been more important in bringing about decline in mortality rates in _________
Developing Countries
What is the goal of public health in terms of the appearance of the graph of survival?
We want the graph to be as rectangular as possible
Life expectancy refers just to _______

We'd preferably want to ________.
quantity of life

maximize quality of life (compression of morbidity)
Who developed DALY? What is DALY?
Murray and Lopez

Disability Adjusted Life Years which incorporate mortality (quantity of life concerns) and morbidity and other quality of life concerns
Study interpretation: Describe the decision tree that leads from Association to Causal relationship
Association present ->Chance absent-> Hypothesis formed beforehand -> no bias -> no confounding -> fits causal criteria -> Causal relationship
In the decision tree that leads from Association to Causal relationship,

What probably occurred if chance was present? What can we do?
There is not a statistical significance.
Type II error

We need to consider whether the sample size was sufficient.
In the decision tree that leads from Association to Causal relationship,

What happens if a hypothesis was not specified first?
Hypothesis generating

Study/cluster
What do you need to consider when you are interpreting a "Positive study"?
Chance - Random Variability

Is the effect real?

Data Dredging

Hypothesis testing
What do you need to consider when you are interpreting a "Negative study"?
The possibility of:

Random variability, which could have obscured a real association.

This relates to sample size and statistical power
The number of the sample size, n is determined by:
Magnitude of effect

Proportion of population exposed for case-control studies, or developing the outcome for cohort studies / clinical trials
Error questions:

Ho is True
Accept Ho
Correct
Error questions:

Ho is True
Reject Ho
Type I error

Reflected in p value
cutoff is denoted as alpha
Error questions

Ho is False
Reject Ho
Correct

Power = 1-B
Error questions

Ho is false
Accept Ho
Type II error.
T/F Increasing Type I error decreases Type II error and vice versa
True
When do we look at Type I and Type II errors?
Type I errors: After the study

Type II errors: Before study
- this is related to the power!
What is true about most negative studies that are published in the literature?
They are underpowered
Key question is:
How big a sample do I need so that if my study is negative, I know I’m not missing anything?
This is the statistical power of a study
What is RR or OR are considered "small effects"

Is it easy to detect small effects?
It is harder to detect small effects (RR or OR < 1.5)
Why should we be wary of studies reporting small effects?
Studies reporting small effects may easily have arisen because of chance, bias, confounding
Exposure is difficult to determine and can limit epidemiological efforts. What are two examples of this?
EMF, Cancer
What are two methods to increase statistical power?
precise classification of disease and exposure status (minimize random misclassification)

adequate follow-up in cohort studies and clinical trials
Adequate follow up?

97%
yes

according to Sackett
> 95% : no worries
Adequate follow up?

87%
maybe

according to Sackett
>80: gray zone
Adequate follow up?

75%
no

according to Sackett
<80: No
Prospective cohort study looking at mortality in 100 patients with 84% follow-up reported 4 deaths

Is this adequate?
NO

4 die, 16 lost to follow-up

Reported mortality is 4/84 = 4.8%

If all those lost to follow-up had died,
worst case mortality: 20/100 = 20%

If all those lost to follow-up had lived,
best case mortality: 4/100 = 4%
Types of Bias

Two Broad Types
Selection and Information Bias
Selection Bias

Three types
The Healthy Worker Effect
Volunteer bias
Berkson’s bias
The Healthy Worker Effect

What type of bias? Description?

Inventor?
Selection bias

Worker population may not represent the general population. May be healthier

Anthony McMichael.
Volunteer Bias

Type of bias? Description?
Selection Bias

People who agree to be in a study are different than those in general population
Berkson’s Bias

Type? Description.
Patients getting care (clinics, hospitals, etc) are systematically different from patients in general populations
Patients with co-morbid conditions are more likely to seek treatment than those with only disease

What kind of bias is shown here? What was the example given in class?
Berkson's bias

Eating disorders and substance abuse together are more likely to be reported by family members than either one condition alone
Information Bias
Any error in how information is gathered about exposure and/or disease
What are the types of Information Bias?
1. Recall bias
2. Interviewer / Measurement / Expectancy / Systematic or Differential misclassification bias
4. Loss to follow-up
5. Expectancy bias
6. Proficiency bias
7. Neyman bias
Neyman bias

What type of bias? Describe.
Errors is WHEN we collect data

Length bias will be discussed under Screening

Look back bias

If we look at point prevalence, those individuals who had a short duration of disease will be underrepresented
Neyman Bias is also known as ________
prevalence-incidence bias
What two types of studies are particularly prone to Loss to Follow-up bias?
cohort and intervention studies
What are ways we can control/limit bias in our studies?
Must rely on study design

Prospective studies generally superior

Choice of controls in case-control study

Rigorous, standardized assessment methods

Use of blinding

Follow-up
T/F Prospective studies are generally superior in limiting bias than the other types of studies.
True
In a study of prophylactic administration of isoniazid, tuberculin-positive school children were randomly assigned to drug or placebo treatment groups. A third group, consisting of those who elected not to enroll in the study, was also observed. After several years, the third group had a significantly higher rate of tuberculosis than the placebo group.

What kind of bias is shown here?
Volunteer bias (type of selection bias)
T/F A confounder can be complex and either known or unknown
True
What can we do if we know what the confounder is?
If known, can be measured and statistically controlled
What is Simpson's Paradox, and what can it determine for us in terms of a variable?
If an apparent effect disappears after controlling for variable, it is a confounder
Methods to Control Confounding
Restriction
Randomization
Stratification
Multivariate analysis
Matching
Methods to Control Confounding

Restriction
Only study people who are homogenous with respect to a known confounder
Methods to Control Confounding

Early heart studies were primarily focused on men, what kind of confounding reduction method is being employed?
Restriction
Methods to Control Confounding

Stratification: Examples
Indirect, direct, SMR

Mantel Haenszel stratification

Chi square, RR for cohort
Mantel Haenszel stratification
Can calculate weighted average as OR or RR to obtain summary unconfounded risk estimate

Also works for Chi square
Stratification can only be done on a _____ number of factors
limited
Multivariate analysis

Describe it. Pros? Cons?
Computer based
Develop a model to explain data

Pros: Linear or logistic regression of multiple variables

Cons: Not good for complex relationships
What is the effect of matching on a confounder?
Match by using same status for potential confounder so effect “cancels out”
In which kind of study can individuals be matched to themselves?
Cross-over study
Influences on study results

Hawthorne Effect
Production of workers improved solely because they knew they were being observed

May account for false positive results
Prosecutor’s Fallacy
1/50,000 that DNA sample taken from innocent person matches DNA at the crime seen

3/4 that person that has DNA that matches the DNA at crime scene is innocent.
Gambler’s Fallacy
A random event is more likely to occur because it has not happened for a period of time
Regression to the Mean

What is can happen when you take a test and your find out your score (relative to the True score that you really deserve...)
Be unlucky and score below your ‘true’ grade

Score exactly at your ‘true’ grade

Be lucky and score above your ‘true’ grade
Ockham’s Razor
"Entities should not be multiplied beyond necessity.”

in other words, the simplest explanations are preferred
Validity (aka internal validity)
= is it a good study?
Generalizability (aka external validity)
= does the study mean anything for the patient before me?
T/F Generalizability is more important than validity.
FALSE.

Validity is more important. It has to be a good study before you can generalize the findings to the general population
What factors can threaten generalizability?
Volunteer bias

Restriction

Invasive intervention studies usually performed on advanced cases

Studies usually performed in academic settings

Compliance

Efficacy (ideal) versus effectiveness (real world)