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95 Cards in this Set
- Front
- Back
RNA is read from ________ and synthesized from ______
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5-3, 3-5
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Capping only occurs in _______
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Eukaryotes
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Polycistonic is found in what kind of RNA?
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mRNA
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Ribosomes don't _______ transcripts of trp operon
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attenuate
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RNA polymerase ____ factors to bind to promoter
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sigma
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Rho binds to ______ sites
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rut
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What 3 factors are involved in termination of transcription?
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Rho, rut, and terminator sequences
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When lactose is present, a _______ binds to the _______ and promotes transcription?
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If you have 2 base codons, after 4 generations, you have _______ amino acids
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16
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O.D. measures _______
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quantity
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What 4 things activate transcription?
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Phosphorylation, being expressed, ligands, dephosphorylation
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Central Dogma
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DNA --> RNA --> Protein
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Process of DNA --> RNA
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Transcription
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Process of RNA --> Protein
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Translation
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Enzyme used in transcription
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RNA Polymerase
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Enzyme used in translation
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Ribosomes
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Process of DNA --> DNA
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Replication
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Enzyme used in replication
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DNA Polymerase
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Where does replication occur?
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Nucleus
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Where does transcription occur?
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Nucleus
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Where does translation occur?
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Cytoplasm
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The mechanism of DNA replication is _______.
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Semiconservative
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What would be the correct sequence of RNA transcribed from the following strand of DNA : attgcacggaatccc
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auugcacggaauccc
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RNA differs from DNA where?
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2' Carbon
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A nucleotide is composed of what?
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Ribose, Phosphate, and a Base
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The primary structure of a protein cosists of ______
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A sequence of amino acids
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What type of bond does not participate in protein folding?
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Phosphodiester
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What is the function of ribosomes?
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They chain amino acids together in the correct order as specified by a template mRNA molecule
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What are enzymes?
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Proteins that catalyze the conversion of a substrate to a product
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What do restriction endonucleases do?
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They digest DNA at the recognition sequences
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Electrophoresis uses electricity to separate nucleic acids or proteins based on ______
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size
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If an mRNA contains 366 nucleotides between and including the start codon and the stop codon, how many amino acids does it code for?
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121
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What is the purpose of the polymerase chain reaction?
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It synthesizes a large amount of DNA using a small amountof template
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What is a selectable marker?
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A gene that is used to determine which cells contain a plasmid (usually killing the cells that don't)
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What are 3 components of a plasmid used for cloning?
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Restriction enzyme recognition sites, bacterial origin of replication, selectable marker
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Which kind of RNA serves as a template for translation?
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mRNA
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Which kind of RNA is an adaptor between mRNA and amino acids?
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tRNA
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Which kind of RNA catalyzes the formation of peptide bonds?
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rRNA
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Which kind of RNA is a component of the splicesome that removes introns from mRNA?
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snRNA
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What happens at a promoter?
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RNA polymerase binds
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Introns are cut out of ______.
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RNA
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DNA is synthesized in the _________ direction
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5'-3'
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Protein synthesis occurs in the _______ direction.
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N to C
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RNA is synthesized in the ________ direction
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5'-3'
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Structure of protein which amino acids make up the protein
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Primary
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Structure of protein that involves disulfide bonds, covalent bonds, interaction, and the chain starts to turn back on itself; involves localized structures such as alpha helix, beta pleated sheets and random structures
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Secondary
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Structure of protein that is a 3 dimentional structure of the entire protein complex with two or more put together
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Tertiary
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Structure of protein that for some proteins offers function
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Quaternary
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How one part of a protein influences another part of a protein
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Allosteric Regulation
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7 Factors that influence eukaryotic transcription regulation
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Phosphorylation, being expressed, ligands, dephosphorylation, cleavage factor, changing of binding partners, release of inhibitors
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FISHING is used to monitor ________ and ________
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recombination, translocation
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What is molecular biology?
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The study of life at the molecular level.
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The ______ of a molecule determines its function.
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structure
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A sequence of DNA that is involved in constructing a polypeptide chain
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Gene
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Characteristics of a gene
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genotype, phenotype, heritable, codes for a product, contributes to a function
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Strong bonds
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Covalent
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Weak bonds
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Hydrogen, Ionic, Hydrophobic
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Discovered the nucleus and nuclein in the nucleus and his student renamed it nucleic acid
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Miescher
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Base + Sugar -->
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Nucleocide
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Nucleocide + P -->
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Nucleotides
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1' Carbon _______
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binds to N
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3' Carbon _______
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doesn't do much
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5' Carbon _______
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binds to P
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Chargaff's Rule states:
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# of Pyrimidines = # of Purines
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Came up with the correct model of the DNA
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Watson and Crick
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Characteristics of the double helix
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strands are anti-parallel, h bonds hold the bases together, they are grouped into minor and major grooves
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_______ have more H bonds and require more energy to break them up
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C and G
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In bacteria and plasmids, when DNA strands begin to twist back on itself and have twist within twists
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Supercoiling
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______ release tension and allow the strands to uncoil
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Topoisomerases
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3 concepts when using tools of molecular biology
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Separation, Identification, Quantification
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______ is the short arm and _______ is the long arm of a chromosome
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P-arm, Q-arm
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The center of the chromosome
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Centromere
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Cut and Paste
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DNA
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Copy and Paste
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Retro
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3 main steps of transcription
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Initiation, Elongation, Termination
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_______ doesn't need a primer
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RNA Polymerase
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Person who studied the nucleosome and histones
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Roger Kornberg
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The trombone structure has to keep replicating for each _________.
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Okasaki fragment
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The loop to form the DNA but create a problem because one strand is longer than the other (leading is longer)
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Telomers
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Pulls the two strands apart
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Helicase
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Enzyme which lays down the primer
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Primase
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Makes the leading and lagging strands, Okazaki fragments
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DNA Polymerase III
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Once the primers are removed, the RNA is taken away and the gap is filled in by this
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DNA Polymerase I
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Seals the bond between the Okazaki fragments
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Ligase
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During DNA damage, bacterias uses ________ while humans use ________ to repair damaged DNA
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photoliases, polymerase
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What detects where DNA is broken and can't repair?
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Damethylate
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Process where and enzyme takes out the mutation then goes back in with a polymerase and ligase
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Methylation
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____ is when a G and A bind together, while ______ is when a G and a T bind together.
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Transversion, Transition
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________ is used to perform deamination on bases; it keeps the base together, but changes the base on the sugar
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Glycosylase
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When 2 chromosomes "cross over" and swap DNA
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Recombination
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_________ shows different ways that the DNA can cut and cross over (either horizontally or vertically)
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Holladay Junction
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With ______ recombination you don't get much swapping
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Patch
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With ______ recombination you get more swapping
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Splice
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Patch recombination is cut _______, while splice is cut _______.
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horizontally, vertically
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__________ is used to see what the gene controls
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Gene Knock Out Technology
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