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369 Cards in this Set

  • Front
  • Back
e.g. microaerophilic
Campylobacter (like a little bit of oxygen) can cause gastric ulcers
e.g. facultative anaerobe
E. coli (can grow with or without oxygen, found anywhere along flask)
Actinomyces +/-
+ rods
Clostridium +/-
+ rods
Bacilis +/-
+ aerobic
Bacteroides +/-
- rods (most gram - are rods)
lactose fermenters
e. coli, klebsiella, enterobacter

(- rods --> facultative anaerobic --> enterobacteriacae)
non-lactose fermenters
salmonella, shigella
Gram - aerobic rods
pseudomonas, hemophilus, vibrio
Gram - aerobic cocci
Neisseria
mycoplasma characteristic
lack cell wall
non-lactose fermenting, oxidase +
pseudomonas (blue)
non-lactose fermenting, oxidase -
shigella, salmonella (no color)
glycine pentapeptide bridge
gram +
transpeptidase (PBP) links:
NAMs

doesn't require ATP
types of exotoxins
1. A-B toxins (cholera, tetanus)
2. Membrane disrupting (hemolysins, alpha toxin)
3. Superantigens (TSS, SPE - strep pyrogenic exotoxin)
A-B toxin mechanism
cholera - Bs surround A, inject A into cell, upreg. of cAMP, efflux of ions out of channels, --> watery diarrhea
LPS = TLR __
TLR 4

and CD14 receptor on Mac
structure of LPS
complex lipid A
R --> S strep requires DNA/RNA
DNA
catalase-negative, beta-hemolytic, bacitracin-sensitive
strep pyogenes
catalase-negative, alpha-hemolytic, optochin-sensitive
strep pneumoniae
catalase-positive, coagulase-negative, novobiocin-resistant
staph saprophyticus
catalase-positive, coagulase-negaive, novobiocin-sensitive
staph epidermidis
teichoic acid
gram +

sepsis syndrome
Tx strep pyogenes
penicillin (exquisitely sensitive)
most common non-supperative complication of strep pyogenes
rheumatic fever

(glomerulonephritis is another sequelae -- tea-colored urine)
broad based bud
blastomyces dermatitidis
function of strep pneumoniae that causes the infection
cell wall
hemolytic uremic syndrome
invasive E. coli
Shiga toxin interferes with
protein synthesis

Shiga toxin can be in E. coli too
hemolytic uremic syndrome frequently in
children
linezolid - static or cidal?
static
Tx: klebsiella, penicillin allergy
Aztreonam

(can't give Vancomycin b/c it's gram negative)
painless ulcer, spirochetes; monitor progress of treatment with
RPR
blue baby, cough, lymphocytosis
pertussis
after treating with cephalosporin, a new fever days later is most likely from
enterococcus
most common cause of traveler's diarrhea
ETEC

(mechanism similar to cholera toxin)
enteric pathogen that mobilizes actin
salmonella
enteric pathogen that only requires small inoculum
shigella
spores unique to
Gram +
anaplasmosis:
1. affects __ cells
2. transmission
3. histological finding
neutrophils
Deer tick
morulae
treat anaplasmosis with
doxycycline
fever, high pulse, high RR, normal BP, high white count...no infection identified
Systemic Inflammatory Response Syndrome
Tx for outpatient MRSA
TMP-SMZ
tetracycline resistance
induction of multi-drug efflux pump
(--> resistance to multiple drugs)
transformation
lysis of donor (or it secretes DNA) --> free DNA (one segment of 1-2 genes) --> taken up by recipient with one of the strands degraded --> triple strand formation --> crossover followed by degradation of old --> some progeny will be transformant (copied crossover strand) and other non-transformant

*Griffiths-Avery experiment

*competence

*easiest method
conjugation
R-plasmid in donor (F+) transfers one of the strands to F- recipient through long pilus; each then replicates its strand; recipient is now F+

*usually gram negatives, esp. E. coli
*R factors = "resistance factors"
*tetracycline resistance happens very quickly in E. coli
*F stands for fertility plasmid
*efficient
transduction
bacteriophage infects host, cell lyses, bacteriophage injects into recipient -- the key is that phage is supposed to be picking up its viral genome that it had the bacterium replicate, but sometimes it accidentally envelopes a bacterial DNA fragment, which it injects into a recipient...that fragment is exchanged with some of the recipient DNA

*proven because DNAases had no effect
*filter prevented contact
*making pore too small for phage blocked transmission
*efficient because virus protects
a lot of toxin genes are transmitted b/w organisms via
transduction
N. gonorrhea pilin variation transferred b/w organisms via
transformation
bacillus sereus toxin transferred b/w organisms via
conjugation
where is cholera
Zimbabwe
common source outbreak epidemic
sharp curve, rapidly resolved (broad street pump)
propogated epidemic
flatter, longer curve; secondary cases; continues until enough of community develops immunity
difference between colonization and infection
invasion of tissue, stimulation of immune response
Tx pseudomonas
fluoroquinolones
opportunist, osteomyelitis
pseudomonas
siderophores
pigments, iron scaveging
pyocyanin
anti-oxidant, gives it's blue-green color
TLR5
flagella

in gut epithelium, TLR5 is basal (intracellular?), because you only want to recognize invasive organisms and not flora

in lung, TLR5 on surface of epithelium because there should never be bacteria there
H. pylori virulence mechanism
stops making flagella, eludes TLR5
Pseudomans ExoU
potent phospholipase that destroys tissue

important cause of ventilator-associated pneumonia
bacteria coordinate community gene expression through small molecules like
HSL (homoserine lactones)
Cyclic di GMP
HSL found in
Gram negative

secretion allows community coordination, e.g. biofilm in Pseudomonas (on all sorts of foreign materials in body), lung infections
GpA strep soft tissue infections may require
surgical debridement

s. pyogenes (general) may also benefit from prophylactic Abx, IV antibodies
vancomycin does not work against
gram negative

prevents cross-linking
Rifampin works by
inhibiting mRNA synthesis (binds RNA polymerase)
Rifampin only used alone for
Neisseria meningitidis (prophylaxis)

-ceftriaxone used to treat the infected individual
metranidazole for
anaerobes
parasites (giardia, gardenerella vaginalis, trichomonas vaginalis)
daptomycin does not work against
gram negative

(DOES do enterococci)
polymixins mechanism
bind to LPS on *gram negative*, then act like a detergent

Tx serious, resistant Gram negative
prototypical broad spectrum Abx
carbapenem

(no enterococci, though)
turns urine orange
rifampin
do not drink alcohol on
metronidazole

(-->disulfuram rxn: throbbing, headache, vomitting, flushing)
fever, chills, sore throat, myalgias --> abdominal pains, diarrhea, disoriented, drowsy, hypotensive
TSS
scalded skin syndrome
staph

exfoliatin toxins A and B - serine proteases
alpha toxin
cytotoxic to membranes, forms a pore, responsible for sepsis syndrome

made by staph (maybe others?)
most staph aureus infections result from
auto-inoculation
what kind of toxin in staph food poisoning
enterotoxin

heat stable, stimulates vagus nerve (increase peristalsis) and vomiting center
staph oxygen classification
facultative anaerobe
Tx staph epidermidis
vancomycin (s. epidermidis is highly resistant to antibiotics)
Tx staph saprophyticus
penicillin
site of colonization - group B strep (S. agalactiae
GU tract

--> neonatal infections involving meninges, blood, GU tract
enterococci infect:
urinary, biliary tract, cardiac valves

(colonize GI as commensal flora)
strep pyogenes colonize:
oropharynx, rectum
s. pyogenes is ___ hemolytic
beta (complete)
viridans strep is ____ hemolytic
alpha (incomplete)
enterococci is ____ hemolytic
gamma (none)
oxygen requirement of streptococci
facultative anaerobes
enterococcus faecalis can grow in:
salt and bile
viridans strep can grow in:
neither salt nor bile
most important virulence determinant of Group A strep
(1) M protein is antiphagocytic by inhibiting the *alternate pathway of complement system*

- 80 types (antigenic variation, different types can cause different symptoms; can vary geographically); without M protein, it's *avirulent*
-our antibodies are durable, but are type-specific

(2) also has a big capsule of hyaluronate

(3) pyrogenic exotoxins

-adhere using adhesin proteins F1 and lipoteichoic acid
findings not suggestive of Group A strep
cough, diarrhea, conjunctivitis

(more viral)
Dx of s. pyogenes
culture is gold standard

rapid strep antigen test is specific but not sensitive...if negative, confirm with culture

anti-streptolysin O reflects past infection
Jones criteria
carditis, polyarthritis, chorea, SC nodules, erythema marginatum

(rheumatic fever)

thought to result from cross-reactivity of M protein with myosin
Strep TSS
pyrogenic exotoxins A-C, superantigen, different from staph b/c of frequent presence of infection (esp. localized)

necrotizing fasciitis linked with specific M types and people who lack antibodies to those
rusty-colored sputum
s. pneumoniae
gram stain of s. pneumoniae
gram + lancet-shaped diplococci
s. pneumoniae is ___ hemolytic
alpha
s. pneumoniae is naturally competent, meaning
it can uptake naked DNA - virulence/resistance factors

90 different serotypes
lipoteichoic acid containing phosphorylcholine C-polysaccharide is unique to
s. pneumoniae

adhesins: choline-binding, pneumococcal surface adhesin A
risk factors for s. pneumoniae
complement deficiency, asplenia, smoking, HIV, COPD, antecedent resp. infection
s. pneumoniae pathogenesis
nasopharyngeal colonization = 2 phenotypes: opaque and transparent (latter can persist)

capsule is antiphagocytic

**infection follows from aspiration of nasopharyngeal secretions; pneumococci adhere to **type II alveolar cells** and initiate inflammatory response

**CELL WALL IS RESPONSIBLE FOR INFLAMMATORY RESPONSE** as is pneumolysin -- fluid accumulation, IL-1 etc
red hepatization, gray hepatization
s. pneumoniae

red hepatization - migration of PMNs, leakage of RBCs, TF expression, coagulation

gray hepatization - recruitmen of macrophages, fibrin deposition
resolution of s. pneumoniae requires
anti-capsular antibodies
__ pneumonia is not necrotizing
s. pneumoniae

gram - is necrotizing
Tx: S. pneumoniae
try penicillin, if resistant, then 3rd generation cephalosporin

either way, first 5 days are generally unresponsive -- vaccinate!
s. pneumoniae vaccine
prevnar - kids - heptavalent (covers 7 types) polysaccarhide protein conjugate, T cell dependent

pneumovax - was another that covered 23 types - used for adults
s. pneumoniae can spread to
meninges, middle ear, joints
scarlet fever
s. pyogenes

trunk, neck --> extremities...spares face
causes of otitis media in children
s. pneumoniae

(followed by hemophilus influenzae, then moraxella)
risk factors for IE
(1) antecedent valvular damage (rheumatic [old], MVP, degenerative)
(2) transient bacteremia
...plus hemodialysis, IV catheters, HIV

-turbulent blood flow leads to non-bacterial thrombus (platelets), or suture line of prosthetic valve, or normal valve in IDUs + transient bactermia --> adherence, more platelets

prosthetic valve, IDU (normal valves), nosocomial (bacteria in blood from catheters and prosthetics - hard to diagnose b/c maybe quiescent or maybe on Abx)
causes of IE
1. staph aureus (nosocomial)
2. viridans strep (dental procedure)
3. enterococcus (GI, GU procedures)
4. other staph
5. culture negative (Abx?)
6. strep bovis
7. gram negative (HACEK - oral flora)
8. fungus (candida nosocomial)
9. polymicrobial

mosty gram + disease, esp. staph
cause of IE in early post-op period

cause of IE in late post-op period
s. aureus

viridans strep
in IE, blood cultures should be
uniformly positive over time increasing
Lumpy-Bumpy
IE - glomerulonephritis with deposition of immune complexes + complement; Osler's nodes
Immunologic manifestations of IE
hyperIgG (rheumatoid factor), hypocomlementemia, immune complexes circulating

may also get sustained bacteremia, bland or septic embolizations
bloody sputum
infarcted lung tissue, possibly embolus from IE of IDU

may also have cavitating lesions
Roth spots
subacute IE (in eye)

Osler's nodes, Janeway lesions (macular), splinter hemorrhages
subacute IE usually caused by
viridans strep (1-2 months of malaise)

staph aureus usually acute
Duke criteria
Major: NEW murmur, positive culture, positive Echo

Minor: predisposition, fever, vascular phenomena, immunologic phenomena (osler, roth, rheumatoid factor, glomerulonephritis)

definite: 2 major, 1 major + 3 minor, 5 minor

possible: 1 major + 1 minor; 3 minor

Differential: rheumatic fever with carditis; collagen vascular disease, myxoma, left atrial thrombus, neoplasms
Tx IE
4-6 weeks of synergistic antibiotics (after multiple sets of blood cultures)

urgent for acute
High risk (prophylaxis for dental procedures, NOT GI or GU procedures) and medium risk groups for IE
High risk:
1. prosthetic valve
2. congenital heart disease
3. previous IE
4. heart transplant with valvulopathy

Moderate risk:
1. rheumatic valve (valvular dysfucntion)
2. MVP **with** regurg

Negligent risk:
1. rheumatic fever w/o dysfunction
2. MVP w/o regurg
lower UTI
cystitis
urethritis
prostatitis

dysuria, incr. frequency or urgency, hemorrhagic in 10%, bladder fullness, discomfort
complicated UTI
men, pregnant women, structural abnormalities, catheter, renal stones

cystitis of long duration, hemorrhagic cystitis
uncomplicated UTI
cystitis of short duration, no structural or neurological abnormalities
upper UTI Sx
fever with hypotension

vomiting, nausea, CVA tenderness
dysuria, freq., urgency, sweating, dehydration

vaginal discharge should necessitate pelvic exam (PID?)
risk of renal abscess in UTI
diabetics, urinary tract abnormalities
urine dipstick tests
leukocyte esterase

nitrate --> nitrite (not sensitive, but specific for certain bacteria that do this
indications for urine culture
pyelonephritis

pregnant women, children, men

structural abnormalities of urinary tract

treatment failure
indications for imaging (CT, IVP, ultrasound)
children (look for structure)
unresponsive bacteremic pyelonephritis
neurogenic bladder

men - do ultrasound and prostate exam
complicated UTI pathogen
e. coli
enterococcus
pseudomonas
s. epidermidis
catheter-associated UTI pathogen
1. candida
2. e. coli
reasons men get UTIs
insertive anal sex (age 16-35)
sex with female who has UTI
anatomical
uncircumcised
prostate hypertrophy (age 36-65)
obstruction
catheterization

*most common in older men b/c of urinary catheter
reasons for bladder infection in women 36-65
gyn. surgery, bladder prolapse
routes for UTI pathogenesis
hematogenous (staph in blood infects renal parenchyma --> pyelonephritis)

ascending route
host factors predisposing for UTI
renal stones
DM, transplant PT
neurogenic bladder
incomplete voiding
extrarenal obstruction
97% of women with recurrent pyelonephritis have:
P1 blood group (have galactose disaccharide on RBC surface that P fimbriae bind)

P fimbriae block phagocytosis; upregulation of P fimbriae is triggered by temperature, [glucose], [AAs]
virulence factors in UTI
fimbriae
flagella
hemolysin
aerobactin (siderophore)
factors inhibiting adhesion in UTI
bladder mucopolysaccharide
IgA

(also, high urea and low pH, micturition)
complications of acute prostatitis from UTI
epididymitis, prostatic abscess, chronic prostatitis (rate)
can also be bacteremia from vigorous prostate massage or spontaneous

Dx: tender prostate + UTI
Tx: acute prostatitis
broad spectrum gram negative until cultures come back

longer course of treatment
Tx UTI
3-day TMP-SMX

10-14 for complicated (maybe fluoroquinolones oral/IV)

even longer for prostatitis
Treat which patients with asymptomatic bacteriuria
pregnant women
neurological or structural abnormalities
**patients undergoing urological surgery
Sepsis = __ + __
infection + SIRS (systemic inflammatory response syndrome...2 criteria)
SIRS criteria
fever (>100.4 or <96.8)
HR >90
RR >20
WBC >12K
Severe sepsis =
sepsis + organ dysfunction (hypoperfusion)
septic shock =
severe sepsis + hypotension despite resuscitation
organisms causing sepsis
**most common are gram +

staph, strep, pseudomonas, neisseria meningitidis, mycobacterium, ricketssia, candida, histoplasma, aspergillus

could also be from toxin
TLR2
peptidoglycan - gram positive
life-threatening sepsis linked to incr/decr protein C
decreased

also increased coagulation, push toward inflammation
TAF1 and PAI inhibit:
fibrinolysis

(protein C inhibits these inhibitors)
signs of early shock (BP, temp, pulse, skin, mental status, urine output, labs)
slightly hypotensive
temp. can be in any direction
bounding pulse
warm dry skin
altered mental status
oliguria
alkalosis
signs of late shock (BP, temp, pulse, skin, mental status, urine output, labs)
severely hypotensive
temp in either direction
thready pulse
cold/clammy skin
AMS
anuria
acidosis
epidemiology of sepsis
20-50% mortality
mortality rate is less, but more total deaths, higher proportion stay in hospital
2nd leading cause of death in non-coronary ICUs
10th leading cause of death overall
more common in men and minorities
therapies for sepsis
works:
fluids
protein C

sepsis bundle: lactate, blood culture prior to abx, abx within 3 hours, pressor if MAP > 65

doesn't work:
steroids (unless stress)
insulin (unless high glucose)
vasopressin
controlling glucose tightly (made it worse)
always STD test for
syphilis and HIV

screen asymptomatic people with risk factors
neisseria gonorrhea classification
aerobic, non-motile, non-spore forming

gram negative diplococci kidney bean shaped
n. gonorrhea biochem
Thayer Martin medium
oxidase +
complex media
CO2 enriched atmosphere
ferments glucose
n. gonorrhea ferments
glucose only
n. meningitidis ferments
glucose and maltose
gonorrhea transmitted by infected __ surfaces
urethral, cervical, rectal, pharyngeal

culture urethral, cervical, pharyngeal, rectal specimen on Thayer-Martin media

**nucleic acid amplification test
gonorrhea virulence and immune evasion:
pilin (inhibits phagocytosis)
porin (resists degranulation, lysosome fusion, block complement)
OpA (cell-cell communication, tight binding)

antigenic variation (Opa, pilin), phase variation (Opa, pilin), IgA protease, LOS, transferrin binding proteins (compete with humans rather than make siderophores), eta lactamase
Dx gonorrhea
Gram stain specific and sensitive in symptomatic men
gonorrhea incubation

sx in women
2-5 days

like UTI + vaginal discharge, vag. bleeding
other manifestations of gonorrhea
epididymitis, prostatitis, Bartholin glands abscess, pharyngeal infection (kinda like strep), proctitis
disseminated gonorrhea
1-3% of patients, associated with female sex and menstruation, complement deficiency

Sx: fever, skin lesions, tenosynovitis, migratory polyarthralgias, oligoarthritis
Tx gonorrhea
3rd generation cephalosporins (single injection) + presumptive Tx for chlamydia (1 day azithromycin or 7 day tetracycline)

for PID, cover GC, chlamydia, GNRs, anaerobes, and strep -- treat longer
chlamydia serovar A-C
conjunctivitis, could lead to blindness
chlamydia more common in M/F
females

3-5% outpatient clinic (asymptomatic)
15-20% STD clinic (asymptomatic usually)

25% of men asymptomatic
80% of women with cervicitis have normal cervical exam
chlamydia incubation period
7-21 days
other manifestations of chlamydia
epididymitis, prostatitis, PID, proctitis, Reiter's

urethritis in women (not mentioned for gonorrhea), Bartholinitis, LGV

most common cause of NGU in men (non-gonococcal urethritis)
Reiter's
conjunctivitis, arthritis, urethritis -- sometimes ulcerative lesions on skin

men with chlamydia
Dx chlamydia
Nucleic acid amplification test
-urethral/cervical samples, urine, vaginal swabs

cultures not routinely done unless sexual abuse suspected

serology for LGV
cervical motion tenderness
PID

also discharge, burning sensation, abdominal tenderness, cervical discharge
LGV sx
primary - painless genital lesion
secondary - adenopathy (buboes), fever, headache, myalgias
late (months to years) - chronic hard inguinal masses, lymphatic obstruction, urethral strictures
Tx LGV
tetracycline or erythromycin 21 days
Herpes stages
primary (21 days if untreated...2 days lesions come, shedding and sx stop after 2 weeks) - cervicitis, balanitis, urethritis, fever, malaise, itching, discharge, dysuria

recurrence - 70% (milder, shorter, unilateral)
Tzanck preparation
unreliable herpes thing
Dx herpes
viral culture - better earlier
in situ, PCR
serology
Haemophilus ducreyi classification
gram neg. coccobacilli

ragged edges, painful
usually single lesion

**buboes, chancroid ulcer and lymphadenitis

Africa
Dx chancroid
culture or visualization on an aspirate
Tx chancroid
macrolide, cephalosporin, or quinolone
calymmatobacterium granulomatis
granuloma inguinale - Donovan bodies (dark stain in smear)

painless, no regional lymphadenopathy

gram negative bacilli

Papua New Guinea, India, Africa, S. America
Tx calymmatobacterium granulomatis
doxycycline 21 days

or macrolide/quinolone/TMP-SMZ
yaw
treponema pertenue
highest incidence of syphilis
MSM, black, HIV+

25% of people co-infected with HIV (syphilis increases risk)
time course of primary syphilis
21 day median incubation

clean-based ulcer heals in 3-6 weeks, but spirochete disseminates
secondary syphilis
chancre resolved
*rash - palms and soles
condyloma lata
mucous patches
alopecia
eye thing

T cells response
dendritic cells express the CCR5 receptor for HIV (HIV likes to infect them)
antibodies detectable
tertiary syphilis
gummatous (pox)
cardio
CNS
Dx syphilis
darkfield specific but not sensitive
fluorescence not used b/c expensive
gold standard is inoculation of rabbits, but not routinely done

(1) nontreponemal - very sensitive but not specific
1. RPR
2. VDRL (CSF - specific, not sensitive)
3. Ab to cardiolipin (titer)

(2) treponemal
1. FTA-ABS (positive or negative)
2. MHA (microhemaglutination)
Tx for syphilis
early syphilis - 1 IM penicillin

late syphilis - 3x IM penicillin (one per week for 3 weeks)

if allergy, try to desensitive, or else try doxy, macrolide, ceftriaxone
Jarisch-Herxheimer rxn
treatment of syphilis - first 24 hours -- usually patients in early syphilis;

fever, headache, myalgias - give antipyretics
response to syphilis Tx should look like
at least 4x decrease in 6 months, 8x decrease by 12 months

maybe 4x decrease by 12 months if early latent

if not, suspect HIV
examine CSF for neurosyphilis if:
HIV with late syphilis or syphilis of unknown duration
ophthalmic signs
treatment failure
evidence of active late syphilis

do titer of that, and cell count
stages of neurosyphilis
early: asymptomatic meningitis
early symptomatic (weeks to years): ocular, stroke, symptomatic meningitis
late symptomatic (years to decades): dementia, personality change, tabes dorsalis (locomotor ataxia)
tabes dorsalis
neurosyphilis

ataxia, lancinating pain
Argyll-Robertson pupil
-contracts not to light but accomodation
-dilates to painful stimuli
Tx syphilis
IV penicillin 2 weeks
LP 3-6 months after tx, then every 6 months after that
VDRL should be non-reactive after 2 years
failure to respond - re-treat
pregnancy and syphilis
routinely screen pregnant women -- when present, can lead to perinatal daeth 40% of time (also low birth weight, congenital abnormalities, prematurity, active syphilis in neonate)
pathogens for neonatal meningitis

prevention?
GpB strep agalactiae
Listeria monocytogenes (gram + rod)
enterococci
e. coli K1 specifically
salmonella

(fecal flora or GU flora - birth - baby aspirates)

early onset - sepsis - pneumonia
late onset - sepsis - meningitis

identify colonized mothers (80% are screened), give *ampicillin*
-also preterm and multiple births are at risk
Tx for GbS
baby has poor host defense, bacteria replicates - treat for 3 weeks or it tends to relapse
Listeria monocytogenes
gram + rod, motile
unpasteurized cheese, unwashed produce

flu-like illness in mom...not that rare
s. pneumoniae virulence factors in meningitis
pneumolysin - stimulates neuronal apoptosis
release of NO - tissue damage
platelet activating factor (clotting, lack of perfusion)
acidosis
elastase
reactive oxygen species
cell wall fragments --> inflammation (meningitis)
sialidase - acts as an adhesin
pathophys of meningitis
inflammation, edema opens up BBB --> CSF protein (loss of tight junctions)

increase ICP --> loss of perfusion, maybe stroke-like picture

derangement of BBB --> hypoglycemia

SIADH - syndrome of inappropriate ADH secretion
principles of meningitis treatment
steroids (especially in S. pneumoniae)
-->
Abx (has to cross BBB)

manage ICP
manage septic shock
prophylax in school
worst meningitis prognosis
s. pneumoniae (sooo much inflammation)

high incidence in South
treatment for S. pneumoniae meningitis
penicillin in 20x MIC

prevent with vaccine
epidemiology of H. influenzae B meningitis
gone in vaccinated kids (universally vaccinated...pretty much eradicated) - capsule allows efficient phagocytosis

sporadic cases in adults who lack the Ab
pathogenicity/virulence of n. meningitidis
colonizes nasopharynx, taken up by epithelial cells - receptor-mediated endocytosis (LPS)

**encapsulated**, binds factor H, inhibits lysis

carriage in population - disease in those who lack the antibody

fulminant SEPSIS
susceptibility to neisseria meningitidis
complement deficiency
n. meningitidis B not covered by vaccine because
sialic acid epitopes look like self...responsible for sporadic cases
normally have n. meningitidis immunity by:
cross-reactive carbs (n. lactamica
n. meningitidis prophylaxis

new vaccine
rifampin, cipro, ceftriaxone

menactra - same + travelers + complement deficiency + HIV+ adults
outcome of meningitis survivors
1/3 have real cognitive deficits, doesn't matter if they took steroids

hearing loss #1
epilepsy
hydrocephalus
ADD
if not bacterial meningitis, what test can you do?
india ink - cryptococcus
antibody - western blot
viral culture
PCR
mycobacterium
imaging in meningitis
CT - ICP, infarct, ventricle size

MRI - diagnostic, followup
lower respiratory tract
bronchi, lungs
#1 cause of pneumonia
s. pneumoniae

(in kids, viral is important)
(gram negatives important in alcoholics, immuno-compromised)
how do you get pneumonia
microaspiration
hematogenous spread (esp. pneumococci)
contiguous spread (i.e. from lymphnode, not so common)
macroaspiration (alcoholic, babies)
risk factors for pneumonia
smoking, alcoholism, toxic inhalations, travel, asthma

CF, COPD, kartagener's

chemotherapy, HIV, malnutrition, transplant
Typical pneumonia features and pathogens
rapid onset of fever, cough

s. pneumoniae, h. influenzae, staph aureus, GAS, moraxella
atypical pneumonia features and pathogens
weeks to months percolating along

legionella, mycoplasma, chlamydia pneumonia, c. psittaci
typical organisms for birth-3 wks. pneumonia
GpB strep, Listeria monocytogenes, cytomegalovirus, HSV
pneumonia in 3 wks.-3 mos.
chlamydia, RSV, PIV

s. pneumoniae, pertussis, staph aureus
pneumonia in 3 mo. - 5 yrs
VIRUSES!

RSV, PIV, adenovirus, rhinovirus

strep pneumoniae, hemophilus, mycobacterium, mycoplasma
pneumonia in 5-15 yrs
atypicals

mycoplasma, chlamydia, TB, s. pneumoniae
pathogens for inpatient ICU
s. pneumoniae (but that one is in all categories)

staph aureus is becoming a pneumonia problem

(the atypicals are usually outpatient)
Sx of pneumoniae
dyspnea, fever, cough, chills, chest pain, myalgia, headache
multilobar, abscesses on CXR
s. aureus
diffuse interstitial CXR
mycoplasma
virulence factors for s. pneumoniae
phosphorylcholine - adherence, PAF
IgA protease
capsule
pneumolysin
adhesins
lipoteichoic acid initiates complement pathway, NO (tissue damage) -- it's hosts inflammatory response that causes problem
Dx s. pneumoniae
blood culture (6-10% CAP are bacteremic)
urine antigen test
sputum culture

*susceptibility test is key! 60% are penicillin resistant
Tx s. pneumoniae
beta lactam

cephalosporins, vancomycin, macrolides, linezolid
typical presentation of mycoplasma

complications
college student, studying, mild respiratory symptoms

"walking pneumonia"
**lacks seasonal pattern**

complications:otitis media, erythema multiforme, hemolytic anemia, myocarditis, pericarditis, neuro

**so if you see pneumonia with weird manifestations, think mycoplasma**
features of mycoplasma
and Dx
NO cell wall

membrane has sterols
remains extracellular
TLR2 important for binding to epithelium
P1 attachment to sialic acid receptors of resp. epithelium
causes destruction of cilia --> mechanical irritation, persistent cough
**acts as superantigen** for PMNs and macs to release cytokines

**cultures rarely done**
IgG serology instead
bedside tests - cold agglutinin
Tx mycoplasma
macrolides or fluoroquinolones
erythema multiforme
mycoplasma
types of chlamydial pneumonia

infect how
trachomatis, psittaci, pneumoniae

non-ciliated columnar cells; multiply in macrophages
Dx chlamydial pneumonia
serology -
treat empirically in meantime
chlamydia trachomatis pneumonia
presentation:
findings:
Tx:
1-3 mo. old infant, staccato cough, rapid RR, NO FEVER
-CXR shows diffuse infiltrates (hilar)
-Tx: erythromycin

*c. pneumoniae is similar but in school age children or elderly

both outpatient usually
c. psittaci presentation
pneumonia, fever, rash, **neurological** (nerve palsy, seizures, hepatitis, pericarditis)

hazy CXR

outpatient usually

Tx: tetracycline, erythromycin
legionella pneumonia epi features

gram?
usually serious, requiring hospitalization - multilobar
only 2-6% of CAPs though

immunocompromised, hospitalized

legionella penumophila (1, 4, 6) and micdadei

gram negative bacilli - fastidious (special media)
legionella pathogenesis
pili and flagella, IC multiplication, evade phago-lysosome fusion

hemolysin, a lot of proteases, ribonucleases --> microabscesses

**T-cell mediated immunity, which is why you see it in immunocompromised or people on steroids
legionella presentation
incubates 10 days
starts as flu-like, super high fever (105), rigors, cough

CNS (confused plumber), diarrhea, nausea manifestions

high white count, abnormal liver

high mortality 15-20% - ICU
Legionella Dx, Tx, prevention
culture on special media
urine antigen (only tests one strain)
serology, but takes a while
thus treat empirically

Tx: Macrolide or levofloxacin

prevention: hyperchlorination, superheating, copper-silver ionization
presentation for pertussis
whooping cough, clear lung exam, leukocytosis with **lymphocytes** unlike with pneumococcus

can also cause encephalopathy
three stages of pertussis
catarrhal (lot of organisms)
paroxysmal (coughing and coughing)
convalescent (still coughing, but organisms down)
Gram of bordatella

types

spread

bacteremia?
gram negative coccobacilli

pertussis, parapertussis, bronchiseptica

respiratory droplets

NO bacteremia, unlike pneumococcal
pertussis toxins
toxins cause **local tissue damage** in respiratory epithelium

pertussis toxin - A/B subunit, works through G-protein to increase cAMP and cause respiratory secretions, sloughing (paroxysmal)

adenylyl cyclase toxin and hemolysin - inhibits WBC chemotaxis, phagocytosis

heat-labile toxin - local tissue destruction

tracheal cytotoxin - destroys ciliated cells, NO kills epithelial cells
Bordet-Gengou media
pertussis

(blood, charcoal, starch)
Dx pertussis
special media - Bordet-Genou
nasopharyngeal culture

serology testing is kinda iffy in kids who got the vaccine

PCR testing is becoming standard of care
Tx pertussis
decrease symptoms and transmission - better if early

macrolide (TMP-SMX is alternative)

give abx prophylaxis to those close by
empiric therapy for pneumonia
beta-lactam + macrolide
Tx for vector-borne
doxycycline

(kids with lyme, give amoxicillin)
IV ceftriaxone for the secondary pathology of Lyme
RMSF

1. organism
2. vector
3. geography
4. timeline
5. gram stain
6. virulence
7. the bite
8. seasonal
9. who?
10. cause of lethality
11. lab values
12. risk of severe disease
13. Dx
1. rickettsia ricketsii
2. hard tick (ixodidae) - dog tick or wood tick
3. southeast, carolinas
4. 5 days - fever, chills, headache, myalgias
10 days - palms/soles petechial rash --> centripetal
5. gram negative bacilli (doesn't stain well)
6. small peptidoglycan, weak LPS
7. most see the tick but don't feel the bite...needs to feed for hours
8. spring and summer
9. kids playing with dogs
10. microvascular injury (incr. vasc. permeability) --> multiorgan failure (CNS, renal, hepatic, pulmonary, gangrene --> amputation)

OmpA/B, phospholipase mediate adherence; escapes phagosome (phospholipase lyse the phagosome membrane), replication in cytosol by binary fission
11. hyponatremia, thrombocytopenia, elevated liver enzymes
12. older, male, black, alcoholism, G6PD deficiency
13. clinical suspicion -- important b/c the IHC on a skin biopsy takes time, also with PCR or IFA serology -- deadly if not treated!!!
activates host cell actin, pushing it to surface--> extracellular release, cell-cell spread

damages cell membranes with free radicals, proteases, phospholipases
R. ricketsii
Rickettsial pox
1. where
2. pathogen
3. vector
4. clinical presentation
5. if not treated
6. Dx
1. poor housing, NYC
2. rickettsia akari
3. mite (reservoir: mouse)
4. black eschar (resembles anthrax); 10 days - flu-like sx, diffuse rash resembling chicken pox
5. will resolve on own
6. clinical, or IHC
Epidemic typhus
1. association
2. pathogen
3. vector
4. inoculation
5. time course
6. pathogenesis
7. main targets
8. mortality
1. crowding, war
2. rickettsia prowazekii
3. body louse (reservoir: humans)
4. after louse bite, you scratch its feces into the bite site
5. 7 days after bite, fever, myalgias, headache, cough, delirium (typhos means HAZY)...centrifugal RASH that spares palms, soles, face
6. lyses cells
7. brain and lung
8. 5-40% depending on how well host is
Brill-Zinsser disease
reactivation of typhus (less severe); holocaust survivors
human granulocytic anaplasmosis HGA (type of ehrlichiosis)
1. pathogen
2. typical patient
3. geography
4. feature
5. gram
6. labs
7. Sx
8. when?
9. vector
10. mortality
11. pathogenesis (no LPS or peptidoglycan)
12. Dx
1. anaplasma phagocytophilium
2. gardener/golfer
3. NE, mid-atlantic, upper midwest, pacific NW
4. morulae (live and multiple in phagosome) -- in NEUTROPHILS
5. gram negative coccoid, obligate intracellular
6. leukopenia, thrombocytopenia, elevated liver enzymes
7. can be asymptomatic OR fever, headache, myalgias, arthralgias, malaise, nausea - like rickettsial minus rash
8. spring, summer
9. hard ticks (black-legged/deer tick - east, WESTERN black-legged tick) - reservoir is small mammals like mice
10. up to 3% - can also lead to opportunistic infections because it affects granulocytes
11. prevents lysosome fusion (no LPS or peptidoglycan); disrupts leukocytes' function; AnkA
12. clinical suspicion, PCR acutely, serology is more accurate...looking for morulae is low-yield
Human monocytic ehrlichiosis (HME)
1. pathogen
2. geography
3. feature
4. vector/reservoir
5. mortality
6. Sx
7. pathogenesis
1. ehrlichia chaffeensis
2. south, southeast; golf-communities with wildlife
3. morulae (monocytes)
4. lone star tick (white-tailed deer reservoir)
5. up to 3% of cases
6. like rickettsial minus rash OR can be asymptomatic
7. prevents lysosome fusion
Lyme disease
1. pathogen
2. epidemiology
3. geography
4. transmission
5. reservoir
6. when?
7. Sx progression
8. pathogenesis
9. Dx
1. Borrelia burgdorferi (gram neg spirochete)
2. most common vector-borne illness
3. primarily NE
4. tick feeding 24+ hours (i. scapularis tick which is very very small unlike others)
5. small mammal (mouse) for nymph which infects...the adults which don't infect are on deer...can get co-infected with HGA and Lyme)
6. summer almost exclusively
7. early: erythema migrans, possible fever, flu-symptoms
early neuro disease: CN palsy, meningitis, radiculopathy
cardiac disease: heart block
late disease: CNS, arthritis (esp. knee), PNS
8. OspC variant determines dissemination; hematogenous spread facilitated by OspA (binds plasminogen)
DpbA/B bind to decorin on collagen in ECM of joints, heart, CNS
other surface proteins bind fibronectin
9. clinical if erythema migrans; if not, antibodies or CSF
post-lyme disease syndrome
chronic symptoms after treatment

don't recommend more tx
common causes of bacterial diarrhea
1. campylobacter
2. salmonella
3. shigella
diarrhea that can be person to person b/c of small inoculum
shigella
salmonella TYPHI
EHEC
campylobacter jejuni
types of toxins in diarrhea, who has them
1. enterotoxin - leads to watery diarrhea via efflux from cell (cholera, ETEC, perfringes)
2. cytotoxin - inflammatory diarrhea (shiga toxin: EHEC, shigella)
3. neurotoxin - CNS or PNS, increases peristalsis, causes vomiting (s. aureus, bacillus cereus)
-the staph neurotoxin does both
-bacillus has 2 neurotoxins: emetic (1-6 hours), diarrheal (10-12 hours)
shiga toxin mechanism
B binds to host cell, transfer of A

A disrupts binding of tRNA to 60S ribosome --> destruction of intestinal cells, decreased absorption from gut
Diarrheal tissue invasion associated with
salmonella pathogenicity islands - invade gut via M cells by injecting secreted invasion protein --> phagocytosis and ruffling
--replicates in phagosome (tolerant to acids), spreads to adjacent epithelial cells and lymphoid tissue
location of 1. watery diarrhea
2. dysentery (cytotoxin)
3. enteric fever (systemic infection)
1. proximal small bowel
2. colon or distal small bowel
3. distal small bowel
pathogens of dysentery
shigella
campylobacter
EIEC
EHEC
C. diff
salmonella NON-TYPHOIDAL
pathogens of watery diarrhea
cholera
ETEC
c. perfringes
bacillus cereus
s. aureus
pathogens of enteric fever
salmonella typhi
yersinia enterocolitica
Tx cholera
doxycycline, rehydration

(75% asx, symptoms last 3 days...no tenesmus, strain, or abdominal pain or fever)
daycare

vomiting, diarrhea, fever, lethargy, tachycardia, tachypnea, mild dehydration
shigella
shigella dysenteriae 1 produces:
transmission:
member of:
Sx timeline:
course in body:
secondary manifestations:
shiga toxin
person-to-person (easily)
enterobacteriaceae (gram neg. rod)
first few days: cramping, watery diarrhea, fever
later: tenesmus, dysentery
lasts 7 days, shedding for 1-4 weeks
moves through mucosa only...from small to large bowel
HUS (hemolytic uremic syndrome) - hemolytic anemia with fragmented RBCs, acute renal injury, thrombocytopenia
HUS associated with
shigella dysenteriae
EHEC (HUC in kids, hemorrhagic colitis)
STEC (HUC in kids, hemorrhagic colitis)
e coli resembling shigella dysentery
EIEC
children's diarrhea (e. coli)
EPEC (nursery)
EAEC (also traveler's diarrhea)
traveler's diarrhea
ETEC
(or EAEC)
e. coli in cattle and spinach
EHEC (hemorrhagic colitis)
salmon pink rash, splenomegaly, fever
salmonella typhi

fever begins 5-21 days after ingestion; persists 4-8 weeks if untreated
-death in 1-30%, intestinal perforation, abscesses, endocarditis
salmonella serotypes
2500

s. typhi and s. paratyphi are strictly human pathogens

non-typhoidal colonizes nearly all animals, so causes infection through contaminated food
features of non-typhoidal salmonella
(1) gastroenteritis
nausea/vomiting/diarrhea 6-48 hours post
fever, cramping
self-limited in 3-7 days

(2) bacteremia
occurs more rapidly than typhoid
lacks rose spots
often in AIDS patients

(3) tissue invasion/localized infection
cholecystitis, osteomyelitis, septic arthritis
Dx diarrhea
fecal leukocytes
bacterial culture
toxin
ova and parasites
shiga-like toxin
EHEC
Tx diarrhea
many bugs are self-limiting, so rehydration will go a long way

Abx for: ETEC, shigella, campylobacter, salmonella
-doxycycline for cholera

AVOID Abx for EHEC b/c it might elaborate more shiga-like toxin
peptostreptococcus
gram + in skin
synthesizes vitamin K, deconjugates bil acids
bacteroides fragilis
because anaerobes are less virulent...
infections are generally polymicrobial

*usually endogenous flora
anaerobe that forms spores
clostridium
anaerobe with capsule
B. fragilis
veillonella
gram negative cocci
normal oral flora; isolated in human bites
veillonella
peptostreptococcus seen in these infections
bone and joint, esp. prosthetic (p. magnus)

female genital tract, intra-abdominal infections
proprionibacterium
acne, opportunistic infections of prosthetic devices

colonizes skin, oropharynx, GU tract

gram + rod
actinomyces transmission
only endogenous, no person-person
Tx actinomyces
prolonged penicillin and debridement
infections from lactobacillus
bacteremia

endocarditis
c. perfringens features

Tx
gas gangrene (myonecrosis) - could happen during surgery
-cellulitis, fasciitis
alpha-toxin destroys membranes
food poisoning 8-24 hours after ingesting meat; self-limited

Tx penicillin + clindamycin
debridement, hyperbaric chamber
clostridium perfringens found in
soil and water contaminated with feces
GI tract of humans and animals

Type A - most human infections
pathogenesis of c. perfringens
alpha toxin --> lyses erythrocytes and endothelial cells --> vascular permeability and hemolysis

beta toxin --> necrosis

enterotoxin --> membrane permeability of sm. intestine
Tx C. diff
metronidazole

relapse in 20-30%
C. diff toxins

Sx
enterotoxin (A) - hemorrhagic necrosis
cytotoxin (B)

mild or bloody diarrhea

only 5% of us are colonized with C. dfif in GI tract
Types of tetanus
1. generalized (lock jaw, hyperthermia, sweating, risus sardonicus, opisthotonos)
2. cephalic (cranial nerves)
3. localized (to site of injury)
4. neonatal (infected umbilical stump)
Tx tetanus
tetanus Ig
metronidazole or penicillin
debridement
floppy baby
c. botulinum

listless, sluggish pupils, no reflexes, poor oral intake
clostridium botulinum found
soil and water; homemade preserves (food-borne), syrups or honey (infant) with botulinum spores; also dust

symptoms in 2 days

wound botulism (skin popping)

asymptomatic adult carriage

toxin A,B,E, and F = human disease
Tx c. botulinum
metronidazole or penicillin
supportive care
botulinum Ig, or equine Ig
Dx c. botulinum
symmetric cranial nerve palsies (4 Ds)
symmetric flaccid paralysis
mentation intact

toxin or organism in stool or serum (mouse bioassay)

electromyography
most common intestinal bacterium

80% of peritonitis, intra-abdominal abscesses
bacteroides (also in vagina)
clinical disease of gram negative anaerobic bacilli
*periodontal
*chronic sinus infections
brain abscess
intra-abdominal
gynecological
*diabetic and decubitus ulcers
pathogenesis of bacteroides
capsule polysaccharide (adhesion, abscess formation, phago. evasion)
superoxide dismutase
synergy with aerobes
**(LPS not a major virulence factor)**

the abscess part is highly associated with anaerobes
superficial fungal infections
dermatophytes (not dangerous) - keratinase; cause inflammation below

Dermatophytes:
tinea corporis - ring worm
tinea pedis - tinea pedis
tinea unguum - ring worm of nails
tinea capitis - ring worm of scalp
tinea cruris - jock itch

malassezia furfur:
tinea versicolor
(lipiphilic; fungemia with lipid infusion)
Subcutaneous fungal infections (dimorph)
--sporotrichosis (sporothrix schenkii) - foreign body (splinter/thorn/nail) --> local, can spread to adj bones and joints **e.g. mycetoma of feet**; spread via lymphatics -- inoculated into SC tissue -- **dimorphic** pyogenic granulomatous rxn **ulcerating nodules along hard cord**
True pathogens - dimorphs - systemic
histoplasma capsulatum
coccidioides immitis
blastomyces dermatiditis
Histo:
1. geography
2. niche
3. dissemination
4. patho
5. cavitation?
1. ohio, mississippi valleys, carribean
2. guano, chicken coops
3. hematogenous, via macrophages
4. mold transforms into yeast in lung
5. can cavitate, can reactivate
spherules
coccidioides immitis
coccidioides immitis
1. geography
2. morphology
3. clinical
1. SW, Mexico, Central/South america
2. spores transform into spherules (pomegranate-like) in lung
3. acute self-limited flu-like (valley fever)
acute or chronic lung disease
dissemination (black, pregnant, immunocompromised)
---localizing in skin, bone, CNS
blastomyces dermatiditis
1. habitat
2. patho
3. test
4. clinical
1. midatlantic (general east of mississippi), peanut farms, beaver dams, organic debris rather than soil
2. transforms into yeast in lung
3. unlike others, no good skin reactivty test (no good antigen marker)
4. cavitary; disseminates to skin, bone, urinary tract in men (prostatitis, cystitis, osteomyelitis)
**can resemble skin cancer...likes to move out to cooler temperatures
cryptococcus neoformans
1. patho
2. source
3. clinical
4. test
1. thick gooey capsule causes problems; inhalation of yeast leads to transient colonization OR acute/chronic lung disease OR CNS invasion
2. pigeon droppings, eucalyptus trees
3. pneumonia, meningoencephalitis, fever, headache, stiff neck, hydrocephalus
4. serum or CSF antigen assay diagnostic in >95% of cases...good antigen b/c of big capsule!
opportunist fungi
1. cryptococcus - YEAST
2. candida albicans - YEAST
3. aspergillus fumigatus - MOLD
4. mucorales genera, rhizopus, mucor - MOLD
candida albicans
1. source
2. patho
3. morphology
4. test
5. Tx
6. case
1. normal flora mouth, GI, GU
2. colonized areas: change in environment (wet skin, antibiotics, birth control, catheter), leads to overgrowth
non-colonized areas: change in immunity (immaturity, HIV) leads to invasion
3. yeast with pseudo-hyphae - protects against phagocytosis
4. only yeast that can take up gram stain
5. take away the thing that's causing it
6. dishwasher, diaper rash
pathogenesis of invasive candida
1. elimination of normal flora
2. breach in anatomic integrity (often biofilm on catheter)
3. defective PMN function

**has a lot of -ases; can adhere to plastic

**usually in critically ill patients with multiple risks (hospitalized, neutropenic, on antibiotics, many catheters)

**fever, leukocytosis, organ dysfunction

**microabscesses in heart, lung, kidney, liver, skin, eye

**candida endocarditis
aspergillus fumigatus
1. source
2. clinical
1. inhalation of spores - mold without a yeast phase
2. a. can elicit allergy (allergic bronchopulmonary aspergillosis...resembles asthma)
b. grow in pre-existing cavity (aspergilloma)
c. invade vasculature - disseminate with local and distant disease (in very sick) (invasive aspergillosis with pneumonia)

**neutrophils prime defenders

**it loves blood vessels, so you can get pulmonary, brain, renal infarcts
Dx aspergillosis
biopsy needed
Mucormycosis
1. source
2. susceptibility
3. clinical
4. mortality
1. everywhere - literally - carpet, chair, etc
2. it loves sugar and acidic solutions, so diabetics, metabolic acidosis, iron overload, PMN dysfunction --> fulminant like a mac truck
3. pneumonia progressing to infarct; sinusitis progressing to brain infarct
4. 50% with meds (importance of host defenses)
most acute and fulminant fungal infection
mucor
mold/yeast?

dermatophytes
furfur
dermatophytes - mold
furfur - yeast
fungal infections that rely more heavily on PMNs vs lymphocytes
lymphocytes: dimorphs, crypto, candida

PMNs: candida, aspergillus, mucor
classes of anti-fungals

cidal or static?
1. polyenes (membrane synthesis) - cidal
2. azoles (membrane synthesis) - static
3. echinocandins (wall synthesis) - cidal
amphotericin B
polyene - lipiphilic, hydrophobic, hydrophilic, amphipathic, amphoteric - macrolides and polyenes

forms channels - cations and macromolecules leak out, cell dies

**bind to sterols, so they can be toxic to us too

**IV admin is gold standard of antifungal drug (can have an oral suspension for oral thrush of candida)
**very uncomfortable to receive - fever, chills, nausea, vomiting, diarrhea (symptomatic premedication
resistance to amphotericin B
dermatophytes (less sterol)

(inducible resistance rare)
Nystatin
topical polyene used Tx candida
cumulative amphotericin B toxicity
renal cells lyse with cumulative effective; elevated creatinine; low K+, Mg++

normocytic anemia
less toxic amphotericin B
encased in liposomes or otherwise highly lipid associated, colloidal dispersion - equal efficacy, $$$
azoles

Tx

mechanism
1. fluconazole** oral, low toxicity, IV available; crypto, cocci, candidiasis
2. itraconazole - dimorphs, dermatophytes; high adipose levels
3. voriconazole - oral and IV; **visual toxicity** - aspergillus, resistant candida

inhibit cytochrome p450 sterol synthesis, toxic byproduct, sabotage membrane integrity

**toxicity is interfering with our sterol synthesis; inhibit our p450 metabolism
azole resistance
nonalbicans candida

inducible rare, but alter p450 or decrease membrane permeability
echinocandins

Tx for
caspofungin - IV - generally well tolerated

for tough aspergillosis
fluorocytosine

Tx for
5-FC

inhibits DNA synthesis

rapid evolution of resistance precludes monotherapy

*effective synergy for crypto
*toxicity - bone marrow suppression, gastritis
Tx mucosal candida
pretty much anything
Tx dermatophytes
topical, systemic azole (systemic for nails)
Tx histo/blasto/coccid
amphotericin B
itraconazole close 2nd
Tx crypto
ampho
fluconazole
itraconazole
synergy with 5-FC
Tx aspergillus
ampho
voriconazole
caspofungin
Tx systemic candidiasis
ampho
fluconazole
voriconazole
caspfungin
co-resistance
several resistance mechanisms in same organism
integrons
mobile genetic elements present in both gram + and gram - that mediate both co-resistance and co-selection
co-selection
the selection of multiple antibiotic resistance genes when one resistance mechanism is selected (usually both have same promoter)

hotspots
penicillin resistance in S. pneumoniae
alteration of PBP, altered cell wall
origin of enterococcal resistance of vancomycin
animal feed had glycopeptide avoparcin
origin of MRSA resistance
pig farmer
how long to develop immune response to TB
6-12 weeks (slow replication) - positive PPD at this time

proliferation of CD4 cells allows rxn to PPD; release IFN-gamma; macs release TNF-alpha

**TNF-alpha REQUIRED for granuloma formation

**patients with no CD4 cells don't go through this process
small antigen load + hypersensitivity -->

large antigen load + hypersensitivity -->

small or large antigen load and no hypersensitivity (AIDS) -->
epithelioid (stimulated mac) cells and giant cells

necrosis and caseation

no granuloma and huge #s of bacilli
primary infection with resolution: __%
85%

ghon complex - hilar node calcification

also enlargement of nodes

progressive primary disease in children -- dissemination, CNS involvement

cavitary is most infectious...highest number of bugs
reactivation in __% of TB
10-15% (85% of which are in lungs)

caseating necrosis, cavity formation
Potts disease
spinal manifestation of TB
Dx reactivated TB
fever, fatigue, night sweats, weight loss; productive or dry cough
miliary pattern TB seen in
children
immunocompromised

(need to biopsy)
INH works by
inhibiting synthesis of mycolic acids
INH toxicity
hepatic (4% >65), neuropathy (pyridoxine - vitamin B6)
RMP mechanism
inhibits RNA polymerase
RMP toxicity
GI upset, jaundice, skin rash

**induces p450 system, DDI

highly protein bound
PZA use
patient must be weighed

not in pregnant

unknown mechanism...need slightly acidic pH
PZA toxicity
gouty arthritis rarely
increase in transaminases (hepatic)
ethambutol use
bacteriostatic

weigh patient, adjust dose for **renal insufficiency**
ethambutol toxicity
Ishihara test for visual deficits (starts as blurry vision, then colorblindness (retrobulbar neuritis)
problem in renal insufficiency
MDR TB Tx

toxicity
Injectable (streptomycin) + 3 oral (quinolone, cycloserine, others)

cycloserine--> convulsion, psychotic depression
ethionamide --> hepatic
streptomycin --> CN VIII toxicity (capreomycin less toxic but 15x more $$$)
XDR =
resistant to INH, RMP, quinolone, one of injectables