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76 Cards in this Set

  • Front
  • Back
steno-
narrow range
eury-
wide range
obligate
necessary
facultative
not necessary
philo-, philic-
lover, loving
phobe-, phobic-
fearer, fearing
extreme
very high or low
hyper-
also extreme
psychro-
cold
acido-
low pH
meso
middle
akali- or baso- or alkaline
high pH
thermo-
hot
halo-
salt
psychrophile
grow in cold temperatures
obligate psychrophile
only grows at low (cold) temperatures
eurythermic
grow over wide range of temperatures
hyperthermophile
grows at very high/extreme temperatures
heterotroph
an organism that must obtain carbon in an organic form made by other living organisms such as proteins, carbohydrates, lipids, and nucleic acids
autotroph
an organism that uses CO2, an inorganic gas, as its carbon source--> not dependent on other living things
chemotroph
energy obtained by the oxidation of electron donors (substances) in their environments. these molecules can be organic (chemoorganotrophs) or inorganic (chemolithotrophs)
Phototroph
carry out photon capturing pigments to acquire energy from light--> photosynthesis (cyanobacteria/algae/or plants)
What are the environmental factors that can fundamentally affect the function of metabolism, cell structures, and energy usage
*Temperature
*Oxygen (gas) requirements
*pH
*Pressure
True or False.
Microbes have an internal control for stable temperature
FALSE. Only mammals and birds keep their internal temperature constant; all other organisms have no internal temperature homeostasis
List the 3 cardinal temperatures
1.) Minimum temperature - lowest temperature that permits a microbe's growth and metabolism
2.) Optimum temperature - promotes the fastest rate of growth and metabolism
3.) Maximum temperature - highest temperature that permits a microbe's growth and metabolism
List the 3 temperature adaptation groups
1.) Psychrophiles - optimum temperature below 15°C, capable of growth at 0°C
2.) Mesophiles- optimum temperature 20°C - 40°C, most human pathogens
3.) Thermophiles - optimum temperature greater than 45°C (some hyperthermophile bacteria can grow above 80°C.
Which gases have the most influence on microbial growth?
Oxygen and Carbon Dioxide
what happens when oxygen enters cells?
It produces TOXIC substances. Cells growing under aerobic conditions must have a way to detoxify these products
What organisms grow best under higher concentrations of CO2 than normally present in the atmosphere?
Capnophiles
What are some of the toxic byproducts of oxygen introduction in cell?
*Superoxide ion (O2)
*Peroxide (H2O2)
*Hydroxyl radicals (OH-)
Most cells have developed __________ and mechanism that neutralize oxygen toxin byproducts
Enzymes
What are two enzymes that can counteract oxygen toxin byproducts?
*Superoxide dismutase
*Catalase
If a microbe is not capable of dealing with toxic oxygen by-products, it is forced to live in _______ _________ habitats (or is an ______________)
Oxygen free; anaerobe
Obligate aerobe
cannot grow without oxygen
Facultatitve anaerobe
utilizes oxygen but can also grow in its absence (prefer oxygen but not required)
microaeropilic
requires only a small amount of oxygen
Obligate anaerobe
lacks the enzymes to detoxify oxygen so cannot survive in an oxygen environment
Aerotolerant anaerobes
do not utilize oxygen but can survive and grow in its presence
What is the pH range where the majority of microorganisms can successfully replicate?
between 6 and 8 (or near neutral pH of 7)
Acidophiles
grow at extreme acid pH
Alkalinophiles
grow at extreme alkaline pH
neutrophiles
grow at neutral pH
How can many microbes keep an internal pH constant?
By expelling protons and hydroxyl ions
Which gram negative bacteria is present in patients with chronic gastritis and gastric ulcers?
Helicobacter pylori
Halophiles
require a high concentration of salt
osmophiles
require a high concentration of solutes, such as sugar
osmotolerant
do not require high concentration of solute but can tolerate it when it occurs
Barophiles
deep see microbes that live under pressure many times higher than atmospheric pressure
All cells need _______ to live and function.
Water
In what growth stage can microbes tolerate extremely dry conditions?
Dormant stage (e.g, spore, cyst)
Generation (doubling time)
time required for a complete fission cycle under optimum conditions
Each new fission cycle increases the population by a factor of ___________
Two (which is exponential or logarithmic growth)
What is a growth curve?
the predictable pattern over time that populations of a certain microbe typically display
What are the stages in the normal growth curve?
1.) Lag phase - "flat" period of adjustment, enlargement; little growth
2.) Exponential (log) growth phase - a period of maximum growth that will continue as long as cells have adequate nutrients and a favorable environment
3.) Stationary phase - rate of cell growth equals rate of cell death caused by depleted nutrients and O2 excretion of organic acids and pollutants
4.) Death phase - as limiting factors intensify, cells die exponentially
What is a batch culture?
Culture where media is innoculated with a small sample of bacteria, then the growth in the media is measured over stages. Initially, growth is slow, but after a certain point, growth becomes logarithmic.
In the stationary phase, the number of growing (alive) cells is ____________ to the number of dead cells.
Equal
Turbidometry
simplest method of analyzing population growth by observing the degree of cloudiness/turbidity (reflects the relative population size)
A method of analyzing population growth which looks at both the viable colony count and the direct cell count
Enumeration of bacteria
What is direct cell count?
A count of all cells present automated or manual; either manual with observations under the microscope or automated with a Coulter counter or a flow cytometer
Viable colony
samples of culture taken in time intervals and spread on an agar plate; then the resulting colonies are counted
Flow cytometer
uses lasers and can distinguish living cells from dead cells
genome
sum total of genetic material of an organism
chromosome
majority, large complex DNA + protein (contains most of the genes for life under normal conditions)
extrachromosomal DNA
plasmids; small, replicating DNA (genetic info not necessary for life & growth under normal conditions)
Characteristics of DNA?
*Two strands twisted into a helix

*Consists of nucleotides with 3 parts



Nucleotide
Basic unit of the DNA structure
What are the three components of a nucleotide?
1.) a 5 carbon sugar - deoxyribose

2.) a phosphate group


3.) a nitrogenous base - adenine, guanine, thymine, cytosine

Nucleotides covalently bond to form a sugar-phosphate linkage -- the __________________
backbone
Making an exact replication of DNA involves many different enzymes called ____________ ____________
DNA polymerases
DNA replication is ___________________ because each chromosome ends up with one _______ strand of DNA and one ______ strand.
semiconservative; new; old
Transcription
DNA transcribed into RNA
Translation
RNA translated into Protein
Characteristics of RNA?
*Single-stranded polymer molecule made of nucleotide monomers
RNA is composed of:
1.) 5 carbon sugar-- ribose

2.) 4 nitrogenous bases -- adenine, uracil, guanine, cytosine


3.) a phosphate group

List the 3 types of RNA
1.) messenger RNA (mRNA): carries DNA message through complementary copy; message is in triplets called codons

2.) transfer RNA (tRNA): secondary structure creates loops; bottom loop exposes a triplet of nucleotides called anticodon which designates specificity and complements mRNA; carries specific amino acids to ribosomes


3.) ribosomal RNA (rRNA): component of ribosomes

What are codons?
the chemical language of mRNA