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157 Cards in this Set

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What does knowledge of microbes enable humans to do?

Prevent food spoilage and disease occurrence

What are aseptic techniques?

Steps taken to prevent contamination in medicine and microbiology laboratories

Describe bacteria

1. Prokaryotes


2. Peptidoglycan cell walls (Carb and protein)


3. Asexual cell division by binary fission


4. For energy they use organic chemicals, inorganic chemicals, or photosynthesis (symbiotic relationships)


Describe archaea

1. Prokaryotic


2. Lack Peptidoglycan


3. Live in extreme environments


4. Kingdom includes: methanogens (methane), extreme halophiles (salinity), extreme thermophiles (temperature)

describe fungi

1. Eukaryotes (have nuclear membrane)


2. Chitin cell walls


3. Use organic chemicals for energy


4. Molds and mushrooms are multicellular consisting of masses of mycelia which are composed of filaments called hyphae


5. Yeasts are unicellular

Describe protozoa

1. Eukaryotes


2. Absorb or ingest organic chemicals


3. May be motile via pseudopods, cilia, or flagella


4. Live free as a parasite


5. Reproduce sexually or asexually

Describe algae

1. Eukaryotes


2. Cellulose cell walls


3. Use photosynthesis for energy


4. Produce molecular oxygen and organic compounds

Describe viruses

1. Acellular


2. Consist of dna OR rna core


3. Core is surrounded by a protein coat


4. coat may be enclosed by a lipid envelope


5. Viruses are replicated only when they are in a living host cell


Who reported that living things were composed of little boxes or cells

Robert hooke 1665

When were the first microbes first observed

1673

Who in 1673-1723 described live microorganisms that he observed in teeth scrapings, rain water, and peppercorn infusions

Antoni van Leeuwenhoek

Who in 1835 showed that a silkworm disease was caused by a fungus

Agostino bassi

Who in 1865 believed another silkworm disease was caused by a protozoan

Pasteur

Who in the 1840's advocated hand washing to prevent transmission of puerperal fever from one OB patient to another

Ignaz semmelwise

Who in 1860's used a chemical disinfectant to prevent surgical would infections after looking at Pasteurs work showing microbes are in the air, can spoil food, and Cause animal diseases?

Joseph lister

Listerine

Who in 1876 proved that a bacterium causes anthrax and provided the experimental steps, Koch's postulates, to prove that a specific microbe causes a specific disease

Robert Koch

Who in 1796 inoculated a person with cowpox virus, the person was then protected from smallpox

Edward jenner

What is the word vaccination derived from?

Vacca for cow

What is immunity

Infecting a person with another lesser form of a virus to allow the body to build is resistance to a disease

What led to the development of the theory of biogenisis

Beginning with Pasteurs work, discoveries included the relationship between microbes and disease, immunity, and antimicrobial drugs

Who in 1858 said cells arise from preexisting cells

Rudolf virchow

What is the cell theory

All living things are composed of cells and come from preexisting cells

What is chemotherapy?

Treatment with chemicals

What can chemotherapeutic agents used to treat infectious disease be?

Synthetic drugs or antibiotics

What are antibiotics

Chemicals produced by bacteria and fungi that inhibit or kill other microbes

What from tree bark was long used to treat malaria

Quinine

Who in 1910 developed a synthetic arsenic drug, salvarsan, to treat syphilis

Paul Ehrlich

When were sulfonamides synthesized?

1930s

Who in 1928 discovered the first antibiotic?

Alexander Fleming

What fungus did fleming observe made an antibiotic, penicillin, and what did it kill?

The penicillium fungus killed staphylococcus aureus

What is bacteriology

Study of bacteria

What is Mycology

Study of fungi

What is parasitology

Study of protozoa and parasitic worms

What is virology?

Study of viruses

What is immunology and what is being studied

Study of immunity and they study vaccines ans interferons to prevent and cure viral diseases

What are serotypes and who proposed their existence in 1933

Variants within a species and Rebecca lancefield

What is recombinant DNA?

DNA made from two different sources

Who in the 1960s inserted animal DNA into bacterial DNA and the bacteria produced an animal protein

Paul Berg

What is microbial ecology

Bacteria recycle carbon, nutrients, sulfur, and phosphorus that can be used by plants and animals

What is bioremediation

Bacteria degrade organic matter in sewage and bacteria degrade or detoxify pollutants such as oil and mercury

What can microbes that are pathogenic be used for

Alternatives to chemical pesticides Im preventing insect damage to agricultural crops and disease transmission

What is an example of a microbe that are fatal In many insects but harmless to other animals including humans and plants?

Bacillus thuringiensis

What is biotechnology?

The used of microbes to produce foods and chemicals, ex: production of insulin = lower costing source for diabetics

What is genetic engineering

New technique for biotechnology

What are examples of genetic engineering?

Bacteria and fungi can produce a variety of proteins including vaccines and enzymes and genetically modified Bavteria are used to protect crops from insects and from freezing

What is gene therapy

Missing or defective genes in human cells can be replaced

Why are the words flora and microflora used to describe bacteria?

Bacteria was once classified as plants

What term has replaced flora?

Biota answer microbiota which reference all microbes in and on the human body

What is the function of normal microbiota

Their presence inhibits the growth of pathogens


They aid Im resistance which is the ability of the body to Ward off disease


Many of them produce growth factors such as foliage acid and vitamin k and b

What are resistance factors?

Skin, stomach acid, and antimicrobial chemicals

What are infectious diseases?

When a pathogen overcomes the hosts resistance and disease results

What are eid s?

Emerging infectious diseases: new diseases and diseases increasing in incidence

What are the most useful units in microbiology

1 micrometer um = 10^-6 m =10^-3 mm


I nanometer nm =10^-9m =10^-6 mm


1000 nm= 1 um


0.001 um = 1 nm

What is total magnification

Objective lens × ocular lens

What is a compound microscope?

An image from the objective lens is magnified again by the ocular lens

Know these parts

What is resolution?

The ability of a lens to distinguish 2 points

How far apart can a microscope with a resolving power of .4 nm distinguish points?

Points that are >\= .4 nm apart

What type of light provides greater resolution

Shorter wavelengths of light provide greater resolution

What type of microscopy uses long wavelengths and what does this limit the resolving power to?

Bright field, about .2um

What is refractive index?

The light bending ability of a medium

What happens of light bends in air too much?

It may miss the small high- magnification lens

What is used to keep light from bending?

Immersion oil

How is immersion oil like glass?

It has the same r. Refractive index

What does brightfield mean?

Dark objects are visible against a bright background

In brightfield what happens to the light?

Light reflected off the specimen does not enter the objective lens


Why is brightfield not recommended for unstained specimens?

Stain changes the refractive index and increases contrast between light and dark objects, a step that is necessary for bright field viewing

What is darkfield illumination?

Light objects are visible against a dark background

In darkfield what happens to the light.

Light reflected off the specimen enters the objective lens

What is the main action of darkfield microscopy?

It requires blocking out of the central light that ordinarily passes through and around the specimen allowing only those rays converging at oblique angles to strike the specimen

What is dark field microscopy good for?

Viewing specimens that can not be stained for various reasons and useful for observing unstained specimens suspended in liquid

What is a phase contrast microscope?

Enables observation of internal structure, does not require staining to view the slide, enables observation of living specimen

What is a differential interface contrast microscope?

Uses two beams of polarized light to enhance the contrast in unstained samples, gives optical density

What is fluorescence?

Uses uv light, fluorescent substances absorb uv light and emit visible light. Cells can be stained with fluorescent dyes called fluorochromes

What is confocal illumination?

Uses fluorochromes and a laser light. The laser illuminates each plane in a specimen to produce a 3d image.

What is a scanning acoustic microscope?

Interprets the action of a soundwave through a specimen. Used to study living cells attached to another surface

What are electron microscopes

Used for objects smaller than .2um such as viruses or internal structure of cells. Uses electrons

Describe transmission electron microscopy

Electrons pass through the specimen and are scattered magnetic lenses focus the image onto fluorescent screen or photographic plate used to view different layers of specimens, kill the specimen

What does a scanning electron microscope do?

3 d view of specimens. On the surface. Useful in studying surfave structures of intact cells and viruses

What is a scanned probe microscope

Uses probes to examined the surfave of a specimen using an electrical current. Used to map atomic and molecular shapes, characterize magnetic and chemical properties, and determine temperature variations

What is a scanning tunneling microscope?

Used to provide detailed views of molecules such as dna

What is atomic force microscopy?

Used to image both biological substances and molecular processes

For microscopes look at table 3.2 on pg 65

What is a smear?

Thin film of a solution of microbes on a slide

How is a smear made?

Usually air dried prior to fixing or staining, usually fixed to attach the microbes to the slide and kill the microbes either using a flame or methanol

What do stains consist of?

A positive and negative ion

How are stains chosen?

According time the Ph of the bacteria, most are negatively charged at Ph 7

Describe a basic dye

The chromophore is a cation, it's attracted to negative bacteria, crystal violet, safranin, methylene blue, and malachite green

Describe an acidic dye

The chromophore is an anion, used to stain the background (negative staining), useful when cell morphology is important ans distortion by fixing is undesirable, ex: eosin, acid fuchsin, nigrosin

What is a simple stain?

Use of a single basic dye and used to enhance the general shape or structure

What is a mordant

May be used to hold the stain or coat the specimen to enlarge it. Increases the affinity of stain for specimen, increases bulk of specimen

What is a gram stain?

Classifies bacteria into gram positive or gram negative and based on the Peptidoglycan layers of the cell

Characterisitcs of gram positive bacteria

Tend to be killed by penicillin and detergents

Characterisitcs of gram negative bacteria

Resistant to antibiotics

What are the colors of gram positive and negative bacteria?

What is the staining procedure

Describe acid fast staining

Some bacteria have a waxy lipid, mycolic acid in their cell wall making it more durable and associated with pathogens. The stain carbol fuschin must be driven into the cells with heat, cells are discolored with acid alcohol.and it will work on all but acid fast bacteria

What is negative staining?

Used for capsules, useful in determining virulence

What is endospore staining?

Heat required time drive a stain into endospores- schaeffer - fulton endospore stain

Describe flagella staining?

Requires mordant to make flagella wide enough to see

What are the cell shapes?

Coccus- sphere


Bacillus- rod


Spiral- spiral


Coccobacilli - combo

What are some unusual shapes?

Stella - star shaped


Haloarcula - square


What are the variations of spirals?

Vibrios- curved rod like


Spirilla - helical rigid body


Spirochetes - helical flexible body

Most bacteria are _________ having one morphology or shape, some are ________ having more than one shape depending on conditions

Monomorphic, polymorphic

What are some arrangements of bacteria?

Pairs: diplo


Chains: strepto


Groups of 4 in 2 planes: tetrads


Groups of 8 in 3 planes: sarcinae


Clusters in multiple planes: staphylococci

What is glycocalyx?

Found primarily in Eukaryotes and found outside cell wall if one exists, usually sticky

What is a capsule and what is it's purpose?

Neatly organized glycocalyx and prevent phagocytosis

What is a slime layer?

Unorganized and loose glycocalyx

What is an eps?

Extracellular polysaccharide that allows cells to attach

Describe flagella

Located outside cell wall, longer than cilia, 9+2 arrangement, made of chains of flagellin, attached to a protein hook, anchored to the wall and membrane by the basal body

When flagella rotate counter clockwise they _____, when they rotate clockwise, the bacteria ______

Run, tumble

What are the different types of flagella?

Atrichous - No flagella


Peritrichous - distributed over the entire cell


Polar- at one or both ends of the cell


If polar the may be


Monotrichous - a single flagellum at one pole


Lophotrichous - a tuft of flagella coming from one pole


Or amphitrichous - flagella at both poles of the cells

What is a run?

Unidirectional movement

What is a tumble?

Periodic and abrupt changes in direction

What is taxis?

Movement toward or away from stimuli

What are two types of taxis?

Chemotaxis, phototaxis

The flagellar protein ______ is used to distinguish variations within species of gram negative bacteria called ______

H antigens, serovars

O157:H7

What are axial filaments?

The mechanism of spirochete movement, also known as endoflagella, they are fibril bundles that wrap around the cell anchored at one end of the cell and rotation causes the cell to move.

Where are fimbriae and pili found?

Gram negative bacteria

Describe fimbriae

they are numerous and They allow attachment, for example neisseria gonorrhoeae attach to mucous membranes

Describe pili

They are few in number, they are used to transfer dna from one cell to another

Describe the cell wall

Prevents osmotic lysis, made of different materials in different microbes

What is Peptidoglycan

Cell wall in gram positive Bacteria


Polymer of disaccharide NAG N- acetylglucosamine, and N- acetlymuramic NAM


Liked by polypeptides

What are three types of gram negative cell walls?

Lipopolysaccharides, lipoproteins, and phospholipids.

Describe gram negative cell walls

Forms the periplasm between the outer membrane and the plasma membrane, provides protection from phagocytes, complement and antibiotics, contains the O polysaccharide antigen (O157: H7)

What Is lipid a

An endotoxin (part of through outer portion of the cell wall that is released when bacteria die )

What are teichoic acids?

In gram positive cell walls, lipoteichoic acid links to plasma membrane, on the wall teichoic acid links to Peptidoglycan.


It may regulate the movement of cations

Compare and contrast gram positive cell walls to gram negative cell walls

Positive: thick Peptidoglycan, teichoic acid, and in acid fast cells - contains mycolic acid



Negative: thin Peptidoglycan, No teichoic acids, outer membrane

Describe the cell walls of mycoplasmas

Lack cell walls, cell membrane has pumps to maintain proper osmotic pressure, their cell membranes contain different sterols that help in stabilization

Describe the cell walls of archaea

Wall less or walls of pseudomurein (lack NAM and NAD)

Describe the cell walls of acid fast bacteria

Mycobacteria, hydrophobic waxy lipid mycolic acid bound to external thin Peptidoglycan layer, very sticky and durable

What does a lysozyme do to damage cell walls?

Digests disaccharide in Peptidoglycan

How does penicillin damage cell walls?

Inhibits peptide bridges in Peptidoglycan

What does osmotic lysis do to damage cell walls

Damages protoplasts and spheroplasts

What is a protoplasts?

Wall-less cell

What are spheroplasts

Wall-less gram positive cell

What are L forms?

WAll less cells that swell into irregular shapes

What is edta?

Ethylemediaminetetraacetic acid weakens the ionic bonds in the outer membrane and thereby damages it, which gives the lysozyme access to the Peptidoglycan layer

Describe the components of the plasma membrane

Phospholipid bilayer, peripheral proteins, integral proteins, transmembrane proteins, glycoproteins and glycolipids project from the surface and provide protection and facilitate communication



Glycoproteins may be involved in infectious diseases

Describe the fluid mosaic model

Membrane is as viscous as olive oil, proteins must move to function, phospholipids rotate and move laterally, entire membrane is self sealing

Describe components of the plasma membrane

Selectively permeable, where nutrient catabolism takes place, enzymes for atp production, photosynthetic pigments on foldings called chromatophores or thylakoids, mesosomes(not sure of what they are or how they are produced )

What can Cause damage to the plasma membrane?

Alcohols, quatemary ammonium (detergents), and polymyxin antibiotics Cause leakage of cell

Describe simple diffusion

Movement of a solute from an area of high concentration to low concentration, continues until equilibrium is reached, passive process

Describe facillitated diffusion

Solute combines with a transporter protein (permease) in the membrane, No energy used by the cell, follows passive diffusion, provides movement of small organic ions that are repelled by the nonpolar lipid tails, nonspecific selection of substance in Prokaryotes, extracellular enzymes will break down large substances before transporters can pass the material

Describe active transport

Substances that require a transporter and atp

Describe group translocation

Requires a transporter protein and a pep (phosphoenolpyruvic acid)


Also called phosphotransferase system and pep group translocation


Used by bacteria for sugar uptake where the source of energy is from pep , example in ecoli

Describe the cytoplasm

Everthing enclosed by the cytoplasmic membrane, about 80% water, contains dna and rna, enzymes and amino acids, carbohydrates, lipids, inorganic ions, many low molecular weight compounds, liquid component is called cytosol, some groups of bacteria produce cytoplasmic inclusion bodies that carry out specialized cellular functions

Describe the nuclear area

Bacterial genome is composed of chromosomal deoxyribonucleic acid, represents the bacteriums nucleiod, No nuclear membrane or nucleoli, nucleiod is one long single molecule of double stranded helical supercoiled dna, in most bacteria the two ends of the dna bond together to form a physical and genetic circle

Describe ribosomes

Composed of ribosomal rna and protein, composed of 2 subunits (30s 50s) function as a workbench for protein synthesis(several antibiotics work by inhibiting protein synthesis )

Describe inclusions

Cyanophycin - cyanobacteria contain large inclusion bodies that store nitrogen for the bacteria


CArboxysomes - cyanobacteria, thiobacilli, and nitrifying bacteria possess bodies containing an enzyme use for co2 fixation


Gas vacuoles - purple and green photosynthetic bacteria contain hollow protein cylinders enabling the organism to regulate buoyancy


Metachromatic or volutin granules store phosphate


Sulfur granules that store sulfur


Poluhydroxybutyrate granules or glycogen granules function as an energy reserve


Magnetosomes - motile aquatic bacteria are able to orient themselves by responding to magnetic fields using membrane bound crystals or magnetite


Iron oxide is produced by a few gram negatives lyses hydrogen peroxide

Describe endospores

Resting cells resistant to desiccation heat, and chemicals bacillus and clostridium

What is sporulation

Endospore formation

What is germination

Return to vegetative state

What does the proteinaceous coat do?

Provides much of the chemical and enzymatic resistance

What is the cortex?

Thick layer of specialized Peptidoglycan under the proteinaceous coat

What is the germ cell wall

Resides under the cortex, this layer of Peptidoglycan will become the cell wall of the bacterium after the endospore germinates

What is the center core

Exists in a dehydrated state and houses DNA ribosomes and large amounts of dipicolinic acid which serves either to stabalize DNA or assist in heat resistance