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335 Cards in this Set

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Pulmonary lesions & lymphadenitis; esp in AIDS patients; resistant to many antitubercuosis drugs
Mycobacterium avium-intracellulare
Gram-negative coccobacillus; meningitis in unvaccinated young children (HIB), epiglottitis, otitis media
Haemophilus influenza
Gram-negative cocci in pairs; meningococcal meningitis (primarily in ages 4-40; outbreaks in school settings)
Neisseria meningitis
GPB, aerobic, non-sporeforming; food poisoning, meningitis
Listeria monocytogenes
GPB, aerobic, sporeforming; anthrax
Bacillus anthracis
Cocci bacilli (Atypical, obligate inracellular parasites); ID by antigen or antibody detection from blood or biopsy; Rocky Mountain spotted fever, murine typhus, scrub typhus, rickettsialpox - species specific and vector specific
Rickettsia spp.
Atypical bacteria; no cell wall; not cultured on typical agar media; lab dignosis by Ag or Ab detection by special request "primary atypical pneumonia" (walking pneumonia)
Mycoplasma pneumonia
Gram-negative cocci in pairs; gonorrhea (urethritis, endocervicitis); septic arthritis
Neisseria gonorrhoeae
Gram-negative, atypical bacteria; tissue cell cultur; lab diagnosis by Ag detection; leading casue (50%) STD "non-gonococcal urethritis/cervicitis"
Chlamydia trachomatis
Non-staining spirochete, syphilis; ID by immunodiagnostic, darkfield, immunofluorescence microscopy
Treponema pallidum
Spirochete, leptospirosis
Leptospira interrogans
Spirochete, Lyme disease, tick-borne
Borellia burgdorferi
Anaerobic, food poisoning, gangrene
Clostridium perfringens
GNB, fecal; Opportunisitic bacteremia & UTI, esp in burn patients
Enterobacter
Types of patients when considering the determination of a Pathogen
Normal Patient b. Patients with compromising or predisposing factors
Predisposing factors to consider in patients
Surgery or trauma b. Immunoincompetence or Immunosuppression (cancer, AIDS) c. Diabetic d. Alcoholism or drug use e. Pregnancy
Modes of infection acquisition
Community acquired b. Hospital acquired (Nosocomial infection)
Geographic distribution and/or "work" environment
Insect vectors/climate b. Farm & ranch c. Construction work (Legionaires Disease)
Gram-Positive cocci spp
Staphylococcus b. Streptococcus c. Enterococcus
Gram-negative cocci spp
Neisseria
Gram-positive bacilli, aerobic, non-sporeforming
Corynebacterium
Listeria monocytogenes
Gram-negative bacilli (Enteric)
Escherichia Klebsiella
Enterobacter Slamonella
Shigella Citrobacter
Proteus Providencia
Gram-negative bacilli (curved)
Vibrio cholera
Vibrio paraheolyticus Campylobacter (microaerophilic)
Helicobacter pylori
Gram-negative bacilli
Pseudomonas Aeromonas Plesiomoas Acinetobacter
Gram-negative bacilli (anaerobic)
Bacteroides
Gram-negative bacilli cocco
Haemophilus influenzae (fulminating)
Bordetella pertussis (whooping cough)
Bacteria needing special culture or exam (nonstaining by Gram's method)
Mycobacterium (acid-fast)Chlamydia (ELISA)Trichomonas (wet prep)
Treponema (immunodiagnostics)
Legionella(immunodiagnostics) Rickettsia (immunodiagnostics)
Bacteria needing Immunodiagnostic testing
Treponema
Legionella
Rickettsia
Fungi (YEASTS)
Candida (gram-positive, KOH)Cryptococcus (India ink wet prep, antigen detection)
Fungi (MOULDS)
Histoplasma (Ag detection)
Coccidioides (Ag detection) Sporothrix Blastomyces Paracoccidioides Microsporum
Epidermophyton Trichophyton
Gram-positive bacilli
Corynebacterium (aerobic, non-sporeforming)
Listeria monocytogenes (aerobic, non-sporeforming)
Bacillus (aerobic sporeforming)Clostridium (anaerobic, sporeforming)
Gram-positive bacilli, anaerobic, sporeforming
Clostridium
Gram-positive bacilli, aerobic, sporeforming
Bacillus
Etiologic agent of gastroenteritis due to the ingestion of contaminated seafood (especially shellfish); a major cause of gastroenteritis in Japan and the South Pacific
Vibrio parahemolyticus
Microaerophilic, GNB curved, characterized by gastroenteritis caused from contaminated or undercooked chicken or raw milk and nonchlorinated water. equal or 2nd to Salmonella in the USA
Campylobacter jejuni
GNB, intial invasion and multiplication w/in intestinal membrane follwed by invasion of bloodstream; ivasion/localization in gallbladder, spleen, liver and bones; rose spots appear on the skin and may become necrotic.
Salmonella typhi
GNB, gastroenteritis from contaminated poultry and reptiles; invasion of intestinal mucous membran but w/o deeper inasion or bloodstrea invasion
Salmonella enteritidis
What family do the gram-neg bacilli enteric belong to?
Enterobacteriaceae
Superficial skin infectio characterized by small pustules followed by thin crust over the area
Impetigo - Invasive tissue infections of Staph aureus
Infection of the hair follicle
folliculitis - Invasive tissue infections of Staph aureus
Deep seated infections in and around the hair follicle
Furuncles - Invasive tissue infections of Staph aureus
Predominant normal flora of the skin and the most comon coagulase negative staphylococcus (CNS); causes bloodstream infections - including endocarditis.
Staphylococcus epideridis
Second most frequent ause of UTI in women of child-bearing age; Coag Negative Staphylococcus (CNS)
Staphylococcus saprophyticus
Group A beta Streptococcus that causes skin infections (impetigo, cellulitis,erysipelas; Necrotizing fascitis and Streptococcal Toxic Shock Syndrome; Acute exudative pharyngitis
Streptococcus pyogenes, group A
Streptococcal gangrene, invasive cellulitis, "flesh-eating bacteria" is also known as?
Necrotizing fascitis
Post-streptococcal complications are?
Rheuatic fever Acute glomerulonephritis
Characterized by the rapid destruction of muscle and fat tissue with high fever and prominent pain; highly invasive and life threatening
Necrotizing fascitis
Characterized by a sudden onset of fever, sore throat, and exudative tonsillitis or pharygitis with enlarged and tender cervical lymph nodes
Acute exudative pharyngitis (Streptococcus pyogenes group A)
Characterized by skin infections such as impetigo, cellulitis, erysipelas and may be accompanied by scarlet fever
Streptococcus pyogenes, group A
Frequent cause of surgical wound infections and nosocomial UTI and a moderate cause of bacteremia
Enterococcus faecalis
What is the number 1 GNB (curved) problem in the world with a mortality rate up to 50% if untreated?
Vibrio cholerae
This bug has multi-drug resistant strains that have been reported with increased frequency, and is Vancomycin Resistant Enterococcus (VRE)
Enterococcus faecalis
GPC in pairs; large mucoid alpha-hemolytic colonies; leading cause of Sinusitis and Otitis media; 50-90% cause of Lobar and bronchial pneumonia
Streptococcus pneumoniae
What is the most frequent isolate (74%) form of Shigella spp that is Serogroup D
Shigella sonnei
E. coli known for infant diarrhea w/ high fatality rate, adherence and dissolve microvilli; outbreaks in newborne nurseries and infant summer diarreah with mucus
EPEC - Enterophathogenic E. coli
E. coli known for diarrhea and dysentery, invasion of intestinal epithelium, shiga toxin and endotoxin
EIEC - Enteroinvasive E. coli
E. coli known for severe watery diarrhea due to cholera-like toxins, esp. in travelers (Travelers diarrhea)
ETEC - Enterotoxic E. coli
E. coli known for hemorrhagic colitis - bloody diarrhea w/o fever, verotoxins; may cause hemolytic uremic syndrome; predominantly due to serotype O157:H7
EHEC - Enterohemorrhagic E. coli
Name the two catagories of Mycobacterium tuberculosis
Primary tb b. Secondary tb
Pulmonary lesios and lymphadenitis commonly seen in AIDS patients; resistant to many antituberculosis drugs
Mycobacterium avium-intracellulare
Catagory of Mycobacterium tuberculosis that is mild and asymptomatic with bacteria contained within tubercles that become calcified during spontaneous healing
Primary TB
(UTI) (cystitis) causes 75-85% of all UTI's mostly in outpatient females
Escherichia coli
Characterized by Severe abdominal pain, watery diarrhea followed by grossly bloody diarrhea and inflammation. "NO FEVER" associated to contaminated hamburger meat
Enterohemorrhagic E. coli (EHEC)
Acid-fast bacilli with large amounts of mycolic acids and lipids in cell wall; highly communicable via aerosols or dust particles containing this type bacilli
Mycobacterium tuberculosis
Gram-negative coccobacillus that is a strict (obligate) parasite and may be part of normal flora of human upper respiratory tract and mouth; infection is usually in the first 2 months of life. Fulminating meningitis.
Haemophilus influenzae
Characterized by a school of fish arrangement and causes chancroids
Haemophilus ducreyi
GNC in pairs, #2 cause of meningitis and often causes secondary necrosis. Predominates in school age children and college students.
Neisseria meningitis
GNC in pairs; sometimes asymptomatic; causes urethritis (in males), endocervix and/or Pelvic Inflammatory Disease and often co-infects with Chlamydia
Neisseria gonorrhoeae
Very small, unusual, ATYPICAL gram-negative bacteria that is the leading cause (50%) of sexually transmitted disease "non-gonococcal urethritis"
Chlamydia trachomatis
Agent of pneumonias, bronchitis usually asymptomatic; probable agent of atherosclerosis
Chlamydia pneumoniae
Atypical bacterium - NO cell wall; "primary atypical pneumonia" (walking pneumonia)
Mycoplasma pneumoniae
"Atypical" bacteria - small coccobacilli, obligate intracellular parasites. Various species cause: Rocky Mountain spotted fever, muring typhus, scrub typhus
Rickettsia spp
Rocky mountain spotted fever is transmitted by what parasite?
Tick (R. rickettsii)
Murine typhus is transmitted by what parasite
Flea (R. typhi)
Scrub typhus and Rickettisalpox is transmitted by what parasite
Mites (R. tsutsugamushi and R. akari) respectively
Spirochete that is transmitted by Ticks and causes Lyme Disease
Borrelia burgdorferi
GPB, spore-forming, aerobic and grows rabidly on a blood agar (without hemolysis)
Bacillus anthracis
What are the two types of Bacillus anthracis
Pulmonary anthrax b. Cutaneous anthrax
Describe Pulmonary anthrax
60-100% mortality; easily aerosolized - spores become and stay airborne easily; spores germinate into bacteria > toxin > disease
Describe Cutaneous anthrax
20-25% mortality; spores enter through cut, abrasion; can lead to systemic infection; Papule > blister-like vesicle > mecrotic lesion w/ black eschar (scab); responds well to early antibiotic treatment
GPB, spore forming; anaerobe; several species cause deep wound abscesses, especially when contaminated with exogenous material
Clostridium spp
Causes food poisoning due to enterotoxin and infection; tissue invasion and Gas gangrene due to exotoxins and invasive enzymes
Clostridium perfringens
Etiologic agent of food poisoning due to ingestion of preformed heat-labile toxins and causes neurological effects - flacid paralysis, double vision
Clostridium botulinum
A major cause of antibiotic associated diarrhea and pseudomembranous colitis
Clostridium difficile
GPB anaerobe that causes tetanus due to neurotoxins and appears much of the time as Lockjaw - continuous muscle contraction of the jaw
Clostridium tetani
GNB, anaerobic, often pleomorphic. Most prevalent anaerobic bacteria; 80% of all anaerobics
Bacteroids fragilis
Etiologic agents of Aspiration pneumonia, Empyema (about 30%), Lung abscess and deep wound abscesses when contaminated with endogenous material
Bacteroides fragilis
Peptostrptococcus
Gram-positive cocci
Fusobacterium
Gram-negative bacilli
GNB of medical importance; a mojor cause of nosocomial infections; resistant to most antibiotics
Pseudomonas aeroginosa
Predisposing factors for nosocomial infections
Metabolic, hematologic, and malignant diseases b. Instrumentation or manipulative prcedures c. Prolonged therapy with immunosuppressive agents, antimicrobics, radiation
GNB fecal route; Opportunistic pneumonia; nosocomial infections of soft tissue and urinary tract, especially in neonates
Klebsiella pneumoniae
GNB fecal; Opportunistic pathogen - bacteremia and urinary tract infections, especially in burn patients
Enterobacter spp.
GNB fecal; Opportunisitc / Nosocomial infections -- burn-wound, UTI
Providencia spp.
pneumonitis and meningitis in neonates from vaginal flora
Group B Streptococcus
GNB; Antigenic types B & D predominate in USA; gastroenteritis from contaminated poultry and reptiles; invasion of intestinal mucous membrane but w/o significant deeper invasion or bloodstream invasion
Slamonella enteritidis
GNB; normal fecal flora; genes for most toxins on plasmids; UTI's (adherence and colonization)
Escherichia coli
GNB; Antigenic groups B & D predominate in USA; dysentery - invasion of intestinal epithelial cells with sloughing and bleeding; exotoxin produced by some strains
Shigella
GPC in clusters; CNS; #1 normal skin flora; endocarditis; 2nd most frequent pathogen recovered from blood culture
Staphylococcus epidermidis
Gram-negative curved bacillis; massive diarrhea; #1 GNB problem in world; antigenic groups O1 or O139; mortality equal to 50% if untreated
Vibrio cholerae
GNB; initial invasion and multiplication w/in intestinal membrane followed by invasion of bloodstream; invasion/localization in gallbladder, spleen, liver, bones; typhoid fever
Salmonella typhi
Gram-positive coccus in chains; invasive tissue infections; impetigo, cellulitis, scarlet fever; necrotizing fasciitis, strep gangrene "flesh-eating bacteria"; strptococcal toxin shock syndrome; acute exudative pharyngitis
Streptococcus pyogens, group A
CNS, UTI in women of childbearing age
Staphylococcus saprophyticus
Gastroenteritis from contaminated shellfish; major cause in Japan and South Pacific
Vibrio parahemolyticus
Microaerophilic, curved bacilli, occasional "S" or gull wing shapes; gastroenteritis, esp. from contaminated or undercooked chicken or raw milk. 2nd to Salmonella in the USA
Campylobacter jejuni
Gram-positive cocci in clusters; Coag positive; Invasive tissue infections; food poisoning (pre-formed enterotoxin); Toxic Shock Syndrome; Toxic Epidermal Necrolysis (TEN) scalded skin syndrome; septicemia / bactermia; bone / joint infections
Staphylococcus aureus
Bacteremia, nosocomial wounds and UTI (multi-drug resistance)
Enterococcus faecalis
Gram-positive coccus in pairs; (capsule, IgA protease); pneumonia, leading cause of otitis media and sinusitis
Streptococcus pneumoniae
Which bacterium causes pneumonitis and meningitis (almost exclusively important) in neonates due to inoculation from vaginal flora?
Group B Streptococcus
GNB, often pleomorphic; anaerobic, deep abscesses aspiration pneumonia, 30% empyema; most prevalent anaerobic bacteria (80% of all anaerobes)
Bacteroides fragilis
GPB, sporeforming; anaerobic food poisoning, gangrene
Clostridium perfringens
GNB, fecal; opportunistic and nosocomial burn wound and UTI
Providencia
GPB, sporeforming; anaerobic, antibiotic associated diarrhea (pseudomembranous colitis)
Clostridium difficile
GNB, fecal; opportunistic pneumonia
Klebsiella pneumoniae
GPB, spore forming; anaerobic, botulism from food poisoning (pre-formed toxin)
Clostridium botulinum
GNB, curved; peptic ulcers
Helicobacter pylori
GNB, fecal; nosocomial UTI and wound infections
Proteus
GPB, sporeforming; anaerobic, tetanus (neurotoxin); Lockjaw
Clostridum tetani
Legionella
GNB, opportunistic pneumonia
GNB, curved; whooping cough (pertussis)
Bordetella pertussis
GPB pleomorphic; diphtheria
Corynebacterium diphtheriae
Common cold (RSV #1 in young children)
Rhinovirus, Respiratory Syncytial Virus, Corona virus
Acute respiratory disease in young adults, conjuctivitis, atypical peumonia, cold-like, gastrointestinal disease; 80% type 4, 7 in military recruit barracks
Adenovirus
Fever blister, cold sores, ad genital lesions; recurrent, latent
Herpes simplex virus
Infectious mononucleosis; non-recurring, non-latent
Epstein-Barr virus
Chickenpox and shingles; recurrent
Herpes zoster
Congenital cytomegalic inclusion disease (impairment of central nervous system development); latent infection problem to immunosuppressed patient
Cytomegalovirus
Describe Enterovirus
Various diseases such as myocarditis, pleurodynia, vesicular rash; one portion of lifecycle was in intestinal tract
Epidemic diarreah in children
Rotavirus
30-50% epidemic nonbacterial gastroenteritis at schools, camps, cruise ships
Norwalk virus
URT; croup and bronchitis, esp. in children)
Parainfluenza virus
DNA virus; parenteral entry; may produce chronic infection/disease; HBcAg, HBeAg, HBsAg and the correlating Ab are used as disease stage markers; longer incubation
Hepatitis B virus
RNA virus, parenteral entry, major growing cause of concern
Hepatitis C virus
RNA virus, fecal-oral transission, shorter incubation
Hepatitis A virus
What causes rabies from (skunk, fox, raccoon, coyote etc)
Rhabdovirus
Pulmonary syndrome - rapid progression after symptoms develop; Hemorrhagic fever with renal syndrome - serious hemorrhagic disease of kidney; Korean Hemorrhagic fever; due to inhalation of rodent excrement
Hantavirus
Arthropod-borne, some tick-borne, others mosquito-borne; causes hemorrhagic diseases and encephalitis
Encephalitis viruses
Uses reverse transcriptase to hide RNA genome in host DNA; predominantly infects CD4 Th cells; decreased immunity permits unusual opportunistic microbial infections to develop
Human Immunodeficiency Virus - Acquired Immune Deficiency Syndrome
Causes opportunistic infections of the skin, nails, vagina and mouth
Candida albicans
dermatophytic moulds, etiologic agents of various tineas
Microsporum
Trichophyton
Epidermophyton
Describe Cryptococcus neoformans
Opportunistic meningitis, esp. in immunosuppressed
Also known as "rose gardener's disease" presents with subcutaneous noduls, (necrosis, ulceration)
Sporthrix schenckii
What causes Systemic respiratory fungal disease that overcomes cell mediated immunity
Histoplasma capsulatum & Cocciiodes immitis
What causes pulmonary lesions and may disseminate to multiple organs
Blastomyces dermatidis & Paracoccidioides brasiliesis
Define HPV and what it causes
Human Papilloma Virus - genital warts, rapidly increasing number of infections, currently a new vaccine developed in 2006
What cells does HIV infect?
CD4 receptors of helper Tcells AND Monocytes (macrophages)
What are two unique characteristics of HIV?
Reverse transcriptase- using RNA template to make v-DNA and new v-DNA is incorporated into nucleus, remaining dormant
What is the affect on the CD4 cells?
Unable to produce cytokines
What are the core strands of the HIV virus?
Two strands of RNA, reverse transcriptase
What is a reverse transcriptase?- unusual-
An enzyme that uses RNA genomic (template) to produce an DNA virus
What type of virus is HIV?
Retrovirus, RNA virus--enveloped; medium-sized
What stage of HIV presents w/mono/flu like symptoms and virus is replicated and shed?
Stage I-Primary HIV Infection
What stage of HIV presents w/ a significant decrease of CD4 cells, p24 reappears, and host has no CMI or HMI?
Stage IV-AIDS
What stage of HIV presents w/ asymptomatic and a gradual CD4 count decrease.
Stage II-Latent period
What stage of HIV presents w/virus replication and shedding at a high rate, oppurtunistic infections, lymphadenopathy w/no other signs of infection, and Kaposi's sarcoma.
Stage III-Persistant Generalized Lymphadenopathy or
AIDS Related Complex (ARC)
Hepatitis is an indication of an infection of what organ?
Liver
How is the Hepatitis virus related?
Infective of the liver---that's it, each has its own unique characterisitics
What is the Nucleic acid of the Hep. B?
Enveloped, DNA virus
What is the transmission of HBV?
parenteral route-- blood; STD, IV drug used needles
Who is at HIGH risk for HBV?
IV drug users, mult. transfussions, medical person. , male homos.
What is incubation period of HBV and where its location?
45-180 days; liver
What phase (acute or chronic) has the symptoms of HBsAg and HBeAg drop with rise of Anti-HBs?
Acute phase
What infection -of HBV is characterized by growing HBsAg and HBeAg with no seroconversion to Anti-HBs?
Chronic infection
Describe the morphology of Campylobacter jejuni?
GNB, thin curved rods
Describe the morphology of Salmonella spp.?
GNB
Describe the morphology of Staphylococcus aureus
GPC in clusters, beta hemolytic colony
Describe the morphology of Streptococcus pneumoniae
GPC in pairs
Describe the morphology of Streptococcus pyogenes.
GPC in chains
What are the symptoms of Necrotizing fascitis? Prognosis?
-Rapid distruction of of muscle and fat tissue with high fever and pain -Poor as it is highly invasive and life threatening
Enterococcus faecalis is an etiologic agent of: (2)
Frequent cause of surgical wound infections and nosocomial UTI -frequent cause of bacteremia
What causes Acute Exudative Pharyngitis?
Streptococcus pyogenes
How does Staphylococcus aureus cause TSS?
Use of highly absorbant tampons or focal/surgical wounds.
What are the symptoms of a Campylobacter jejuni infection?
-Intestinal mucosal epithelium ulceration -diarrhea varies from massive watery stool to grossly bloody stool
How does Vibrio cholerae cause infection?
Non-invasive organisms localize in the small intestine and release Cholera toxin (enterotoxic exotoxin)
How is Campylobacter jejuni transmitted?
Usually from food (fecal oral) especially under cooked chicken, raw milk and non-chlorinated water
What bacteria often cause Bacteremia and Septicemia in Pt. with deep, poorly draining infections?
Staphylococcus aureus
What are the symptoms of Acute gastroenteritis? (Salmonella enteritis)
-Bacteria invade intestinal mucous membrane causing acute inflammatory reaction -sudden onset of non-bloody dirrhea, vomiting and fever -onset: 6-48 hrs. -symptoms last 2-7 days
What are the symptoms of food poisoning by Staphylococcus aureus?
Nausea, vomiting ab. cramping, watery diarrhea within 1-6 hrs; lasts about 24 hrs.
Most pathogenic Vibrio cholerae are of what serotype?
O1 and O139
Where are two post streptococcal complications that can occur (as outlined)?
-Rheumatic Fever -Acute Glomerulonephritis
What are two terms for a bloodstream infection?
Bacteremia and Septicemia
What are the infections associated with Staphylococcus epidermidis?
Wound/incision infections and endocarditis in seriously ill patients
What bacteria is said to be Vancomycin Resistant?
Enterococcus faecalis
What are the symptoms of (TEN) scalded skin syndrom?
-Initial local red rash with posible conjuctivitis and URI -Followed by a large flacid bullae which rupture and cause epidermis to peel off revealing "scalded" appearence
What causes Necrotizing fascitis?
Streptococcus pyogenes
What causes Toxic Epidermal Necrolysis in children under 5 y/o?
Staphylococcus aureus
What causes nearly 9% of bacteremia cases?
Enterococcus faecalis
What causes pneumonia and meningitis in neonates?
Group B Streptococcus
What causes post streptococcal complications (as outlined in lecture)?
Autoimmune reaction of Ag-Ab complexes
What causes scalded skin syndrome?
Staphylococcus aureus
What disease is associated with Salmonella enteritidis?
Acute gastroenteritis
What is a normal flora of the skin and the most common coagulase negative staphylococcus?
Staphylococcus epidermidis
What is the mortality rate associated with untreated Vibrio cholerae?
50%
What is the primary manifestation of Vibrio parahemolyticus?
Gasteroenteritis due to the ingestion of contaminated seafood.
What is the second most common cause of UTI in women of CB age?
Staphylococcus saprophyticus
What microbe initially invades the terminal portion of the S. Int., multiplies in the lymph nodes and migrate to the blood stream?
Salmonella Typhi
What microbe is responsible for nearly 20% of sore throats (that have been cultured)?
Streptococcus pyogenes
What term is given to Enterococcus faecalis based on ite antimicrobic susceptibility?
Vancomycin Resistant Enterococcus
What two microbes combine to cause 90% of skin infections such as impetigo, cellulitis, erysielas?
Staphylococcus aureus and Streptococcus pyogenes
What virulence factors are associated with Staphylococcus aureus?
-Several toxins and invasive enzymes (coagulase, fibrinolysin, lipase and a number of proteases)
What virulence factors are associated with Streptococcus pneumoniae? (3)
-Antiphagocytic capsule -IgA protease -Increase in penicillin resistance
What virulence factors are associated with Streptococcus pyogenes? (4)
-hyaluronic acid capsule
-CW "M" protein is antiphagocytic
-erythrogenic toxin
-Streptolysin toxin O and S
Streptococcus pneumoniae is an etiologic agent of: (4)
Lobar and bronchial pneumonia
Sinusitis
Otitis Media
Meningitis
What is a cause of Meningitis especially in individuals over the age of 10 y/o?
Streptococcus pneumoniae
What are the symptoms of Acute Exudative Pharyngitis (5 listed)?
-Fever
-sore throat
-exudative tonsillitis
-pharyngitis
-tender cervical lymph nodes
What is the leading cause of lobar and bronchial pneumonia? What percentage of cases?
Streptococcus pneumoniae 50% - 90%
How do neonates come into contact with Group B Streptococcus?
Normal vaginal flora of the mother
Describe the morphology of Vibrio cholerae?
GNB, curved
What causes TSS?
Staphylococcus aureus
How does Staphylococcus aureus cause food poisoning?
Ingestion of heat-stable enterotoxin
How is Salmonella spp. transmitted?
(Fecal to oral) comtaminated food and water, especially: -improperly cooked/cleaned meat -eggs and dairy -foods preparted on contaminated surfaces
What microbe usually localizes in the gallblatter, spleen, liver, and sometimes bones
Salmonella Typhi
What percent of Pneumonia is atributed to Staphylococcus aureus?
Less than 5%
What symptoms are associated with an infection of Vibrio cholerae?
hypersecretion of water and chloride caused reverse ion transport
-"rice water stool";
up to 16 liters a day
How is Vibrio cholerae normally transmitted?
In areas with poor sanitation cholera is found in contaminated water supplies.
In relative terms, how many Vibrio cholerae must be ingested to develope symptoms? Time of incubation?
-"Many" or "large numbers" -a few hours to five days
What are the four invasive pyogenic infections associated with Staphylococcus aureus?
-Impetigo -Folliculitis -Furuncles -Wound or internal infection
What are the symptoms associated with Salmonella typhi?
Fever: 10-14 days after ingestion -HA, myalgia and malaise: between 5-10 days -GI symptoms:15-20 days (local necrosis lead to hemorrhage and lesions
What disease is associated with Salmonella typhi?
Typhoid fever
What disorder is associated with rapid distruction of muscle and fat tissue with high fever and pain and what causes it?
-Necrotizing fascitis -Streptococcus pyogenes
Which bacteria has a hyaluronic acid capsule which appears similar to "self"?
Streptococcus pyogenes
What is a GNB that is found in soil and water environment of vietnam, afganistan and Iraq. This is natural and nosicomial?
Acinetobacter baummnanii
What the etoiology of Acinetobacter baumannii?
Opportunistic pathogen-- post traumatic wound abscess and septicemia
What is an increasingly antibiotic resistant bacteria of GNB found in our war zones?
Acinetobacter baumannii
What is the GPB, pleomorphic, that causes diptheria
Corynebacterium diptheriae - pseudomembrane; toxin affects myocardium/other tissues; Necrotic surface epithelium enmeshed in fibrous exudate
What GPB who's toxin affects the mycardium and other tissues? - causes necrotic surface epithelium enmeshed in fibrous exudate.
Corynebacterium diptheriae
What GNCB would require you to perform a breath test to detect urease?
Helicobacter pylori
What GNB, pleomorphic, is sometimes called the Pontiac fever?
Legionella pneumonia - IFA, immunoassays for Ag in urine
What is the GNB that is contracted via fecal-oral route that is an oportunistic nosocomial pneumonia?
Klebsiella pneumoniae
What GNB, grown on MacConkey agar, associated with Viet Nam?
Acinetobacter baumannii - oportunistic; increasingly resistant to antibiotics
What is defined as pus-producing/abscess forming?
pyogenic
What are the enzymes that are associated with Staph A. toxins?
coagulase, lecithinase, hyaluronidase, fibrinolysin, hemolysin, and streptokinase
What is the name of the Staph A. GPC that is characterized by small pustules followed by a thin crust over the area?
Impetigo - skin infection
What bacteria causes folliculitis, feruncles (boils), and wound and internal tissue infections?
Staph A. (GPC)
What is another name for scalded skin syndrome caused by the Staph A GPC?
Toxic Epidermal Necrosis - flaccid bullae; bacteria recovered from initial site of infection
Staph A. (GPC) produces a toxin mediated by a plasmid? Requires a toxin test.
Toxic shock syndrome - causes massive & unregulated stimulation of the immune system
What bacteria is the leading cause of food poisoning?
Staph A. (GPC) - produce enterotoxin
Blood stream infection resulting from deep, poorly draining infections which invade the bloodstream and spread to numerous body sites?
Septicemia/bacteremia caused by Staph A. (GPC)
Type of infection that generally follows a device implantation or trauma most often caused by Staph A.?
osteomyelitis & septic arthritis - pneumonia
Caused by the normal predominant flora of the skin, this bloodstream bacterial infection is cause for endocarditis in seriously ill patients?
Staph A. (Coag Neg.) - 2nd most frequent pathogen from blood stream
Is the 2nd most frequent cause of UTI in women of child-bearing age?
Staph A. (Coag Neg) - E. coli leading cause UTI
Skin rash due to erythrogenic toxin is characteristic of ______. IgG antibody to toxin prevents rash in future infections.
Scarlet fever - type of Streptococcus pyogenes, group A
Characterized by GPC in chains and associated with beta hemolytic colonies?
Streptococcus pyogenes, Group A
Characterized by acute toxic and rapid necrotic invasion by enzymes of tissue? Highly invasive and life threatening
Necrotizing fascitis/Streptococcal Toxic Shock Syndrome - requires debridement of affected tissue to remove toxin
Also known as streptococcal gangrene, invasive cellulitis, "flesh-eating bacteria"? Member of the streptococcal pyogenes, group A
Necrotizing fascitis
Two Post Streptococcal complications? Result from autoimmune rx of Ag-Ab complexes.
-Rheumatic fever (Ag-Ab complexes attack heart tissue after throat infection)
-Acute glomerulonephritis (Ag-Ab complexes attack kidney tissue after throat or skin infection)
Causes pneumonitis and meningitis in neonates due to inoculation from vaginal flora?
Group B Streptococcus - Culture b4 delivery
Lobar bronchial pneumonia (50-90%), sinusitis, otitis media, meningitis (esp. > 10yr) are associated with this bacteria?
Streptococcus pneumoniae (GPC in pairs) - A hemolytic colonies
Virulence factors include antiphagocytic capsule, IgA protease and penicillin resistance increasing, which requires Ag indentification from CSF?
Streptococcus pneumoniae (GPC in pairs)
Known for frequent cause of surgical wound infections and nosocomial UTS' s? Requires vancomycin resistant enterococcus (VRE).
Enterococcus faecalis (formerly member of group D Streptococcus)
The "O" in defining the enteric antigen is descriptive of ?
Cell wall antigen
The "H" in defining the enteric antigen is descriptive of ?
Flagella antigen
The "K" in defining the enteric antigen is descriptive of ?
Capsule antigen
In order to test for Vibrio cholerae, a special request must be made for which special media?
Alkaline and selective
A form of gastroenteritis from the ingestion of seafood, esp. shellfish?
Vibrio parahemolyticus
GNB-thin curved rods-causing gastroenteritis 2nd to Salmonella is known for ulceration of intestinal mucosal epithelium? Caused by toxins and invasive enzymes resulting in watery to bloody stools
Campylobacter jejuni - selective plating w/ antibiotics; microaerophile
Characterized by "O" & "H" antigens with serogroups B & D predominating this GNB requires large amounts of bacteria present to cause gastroenteritis?
Salmonella - sudden onset of diarrhea
Bacteria invade epithelial cells->migrate to blood stream (local necrosis lead to hemorrhage and rose spots on skin) ->localization of bacteria in gall bladder, spleen, liver, & sometimes bone -> carrier state in 5% pts. Describes which bacteria?
Salmonella typhi - fever after 10-14 days; headache, myalgia, malaise persist 5-10 days; mild diarrhea 15-20 days after ingestion
Serogroup A cause more severe form of dysentary than other species
Shigella dysenteriae
Serogroup B 25% of shigella species that are located in the US (most common)?
Shigella flexneri
Serogroup D most frequent isolate (74% of isolates)
Shigella sonnei
This GNB is transmitted fecal-oral needing only a very small # bacteria to establish infection in which children under 10 account for over 2/3 of all cases?
Shigella spp.
Refers to those members that are normal flora of the intestinal tract: primarily escherichia, klebsiela, enterobacter
Coliform
What is the GNCB that causes whooping cough?
Bordatella pertussis - effects of the toxin that has produced mucus; IFA
What is the route of infection of E. coli bacteria causing UTI's?
fimbriae attach to epithelial cells - fecal contamination
Primarily responsible for outbreaks in newborn nurseries and infant summer diarrhea, causes microvilli of intestinal lining to dissolve?
Enteropathogenic E. coli (EPEC)
E. coli that produces a shigella-like toxin; necrosis of epithelial cells which invades intestinal epithelium?
Enteroinvasive E. coli (EIEC) - blood and leukocytes in stools (dysentary)
Type of E. coli that causes "traveler's diarrhea" (cholera-like toxin) ?
Enterotoxic E. coli (ETEC) - stools profuse and watery WITHOUT mucus and blood
Type E. coli known as hemorrhagic colitis that may cause hemolytic remic syndrome and presents with SEVERE abdominal pain, watery diarrhea followed by grossly bloody diarrhea and inflammation; "NO FEVER"?
Enterohemorrhagic E. Coli - "O157:H7";verotoxin (shigella-like); Sorbitol MacConkey
Would use Kinyoun acid-fast stain or Truant's flourochrome stain to identify this commonly recover bacteria from AIDS patients?
M. avium-intracellulare - chronic pulmonary lesions and lymphadenitis
Epiglottitis & laryngitis in children; otitis media; sinusitis; pneumonia (2-18%); this GNB with a type B polysaccharide capsule attaches to epithelia cells via fimbriae where it releases IgA proteases?
Haemophilus influenzae - chocolate agar for hemin & NAD (growth inhibited on sheep, horse, and human blood due to enzymes which destroy V factor). Serological test of CSF
This bacterium causes chancroid and has a school of fish arrangement?
Haemophilus ducreyi
Bacteria that causes meningitis which needs a Ag indentification from CSF? - #2 major cause of meningitis.
Neisseria meningitis - GNC in pairs
What the morphology of HIV?
Medium sized, enveloped RNA virus
Describe the structure and composition of HIV?
-Envelope: Glyccoprotein 41 and 120 -Capside: Protein 24 -Core: 2 RNA strands and reverse transcriptase (produces DNA from RNA)
What are the two serotypes of HIV?
-HIV type 1: presents world wide -HIV type 2 presents primarily to western Africa
Describe the interaction between HIV and host cells.
-GP120 attach toCD4 of T-cell
-RNA enters cell
-makes new viral DNA from RNA
-viral DNA is encorperated into the host cell DNA
-alters the ability of the cell to produce cytokynes
-new virons are released by budding
What types of cells typically are infected by HIV?
T-cells, Monocytes, and macrophages
How is HIV transmitted (3)?
-Unprotected sex -blood products -perinatally
What is the name of HIV stage 1? Average duration?
"Primary/Acute HIV infection" lasts from 1 to 4 months.
What is the name of HIV stage 2? Average duration?
The "latent" stage lasts for an undetermined period of time (sometimes years).
What is the name of HIV stage 3? Average duration?
Persistent Generalized Lymphadenopathy (PGL) or AIDS Related Complex (ARC) usually lasts between 2-4 years.
What is the name of HIV stage 4? Average duration?
"AIDS" usually lasts 1-2 years
What are the symptoms associated with HIV stage 1?
Flu-like infection usually lasting 1-3 weeks.
Mono w/ night sweats, fever, malaise, rash, muscle/joint pain
What are the symptoms associated with HIV stage 2?
Patients are asymptomatic
What are the symptoms associated with HIV stage 3? (5)
-PGL ( Persistent Generalized Lymphadenopathy), diarrhea, weight loss, night sweats. "Kaposi's sarcoma": Visible tumor nodules both cutaneous and in the oral cavity- yeast ; Recurrent shingles, bact. skin infec.
What are the symptoms associated with HIV stage 4?
Patient is extremely suceptable to opportunistic infection
What is a cancer typically seen in elderly but an AIDS skin lesion sarcoma ?
Karposi's sarcoma
What is a chronic pulmonary and lymphadenitis?
MAI or MIC-- Mycobacterium avium complex-- disseminated; along with Cryptococcal meningitis (yeast)
Virus that causes 15% of gastrointestinal disease---types 40,47?
Adenovirus
Discuss treatment methods during Stage 3 (GPL) of HIV infection.
As p24 begins to accumulate due to rapid replication of virus, CD4 levels begin to decline. Treatment is aimed at maintaining low levels of p24.
What is virulence in Stage 4-- HIV? What is tx?
LOW CD-4 (below 200 and dropping) and low CD-8 cells, HIGH Ag p24; Ab ineffective along with Cell-Med. and Humoral Immunity
What is a general definition of hepatitis?
An infection of the liver caused by one of several major distinct viral agents.
What is the incubation period of HBV?
Usually 45 to 180 days
What are the surface markers of HBV? (4)
--HBsAg: earliest indicator of acute infection --HBeAg: indicator of acute infection, viral replication, and most infectious period --AntiHBe: seroconversion suggests resolution of transmissibility --AntiHBs: serological marker of recovery and major protective antibody against HBV
What major markers, which indicates chronic HBV?
Failure to seroconvert HBsAg to Anti-HBs or HBeAg to Anti-HBe
Describe the morphology of HCV.
Small lipid enveloped RNA virus
Describe the morphology of HAV.
Small non-enveloped RNA virus with a small capsid protein
How is HAV transmitted?
Primarily fecal-oral route via food or water
What is the incubation period of the Rabies Virus?
About 8 weeks
How is Rabies virus transmitted?
Virus-laden saliva of an infected animal introduced into a bite or scratch wound
What is the primary manifestation of Rabies virus?
-Respiratory paralysis (death)
Known as "acute repiratory disease" this virus is common in 80% of military recruits?
Adenovirus type 4,7 - vaccine available
What are some general symptoms characteristics of Hemoragic Fever Viruses?
-Acute fever, flu-like Sx, muscle aches -Hemorrage/ capilary leakage (leads to shock)
Describe the morphology of Hemoragic Fever Viruses.
Enveloped RNA viruses
What is the level of contagion of Hemoragic Fever Viruses?
Moderate
What are the primary characteristics of Hantavirus Pulminary Syndrom?
Interstitial pulminary edema and respiratory failure
Discuss Hantavirus Hemoragic Fever in terms of Frequency/Vector/ and geographic location.
Very Frequent/Rodent Ecreta/Northern Asia & Europe
Discuss Hantavirus Cardiopulminary Syndrome in terms of Frequency/Vector/ and geographic location.
Rare/Rodent Ecreta/North America
Discuss Rift Valley Fever in terms of Frequency/Vector/ and geographic location.
Frequent/Mosquitoes/Africa
Discuss Dengue Hemoragic Fever in terms of Frequency/Vector/ and geographic location.
Frequent/Mosquitoes/Tropical Africa & Amazon basin
Discuss California - La Crosse- encephalitis in terms of Frequency/Vector/ and geographic location
Frequent/ mosquito/ North mid-west and northeast US-- RNA virus
Discuss St. Louis encephalitis virus in terms of Frequency/Vector/ and geographic location.
Frequent US/ Mosquito/ US-- RNA virus
Discuss Japanese encephalitis virus in terms of Frequency/Vector/ and geographic location
Frequent/Mosquito/ / SE Asia-- RNA virus
What is the predominant vector for Encephalitis viruses?
Mosquitoes
What is the mortality rate of Encephalitis viruses?
20-40%
How is Variola virus primarily spread?
Aerosolized scabs or skin
What disease does Variola virus cause?
Smallpox
These surface antigens (Hemagglutinin & Neuraminidase) which are sites of attachment on the virus envelope are identifiers for which virus? New major antigenic types sweep the world every 2-4 years.
Influenza virus - Grp A,B high rate of gene recombination & mutation; RNA 8 strands ssRNA; ELISA, PCR
Which virus is the overall most prevalent cause of the common cold?
Rhinovirus
What is the more prevalent virus causing the common cold in infants & young children?
Respiratory syncytial virus
What is the name of the virus that causes SARS?
Corona virus - transmitted by droplets and contact (esp. hands and eyes) and by inhalation; cell culture; PCR
One of the predominant causes of conjunctivitis "pink eye" is associated with this virus?
Adenovirus
Virus that causes croup, bronchitis, cold-like symptoms; especially in children?
Para influenza virus
Virus that causes fever blisters, cold sores, gingivostomastitis, keratoconjunctivitis, genital lesions, meningitis (neonates)
Herpes simplex (1,2) - virus hides in nerve ganglia serving region of primary lesion; DNA virus
Cause of infectious mononucleosis? Non recurring, non latent
Epstein Barr virus
What causes congenital cytommegalic inclusions in children via vaginal flora during birth and damages CNS? Cuases Jaundice, multiple organ, microcephaly. Mental and physical retardation.
Cytomegalovirus
Activated when CMI is reduced in predominantly immunocompromised Pt's
Cytomegalovirus
What causes genital warts and rapidly increasing # of infection. Vaccine in 2006
Human Papilloma Virus (HPV)
Is an atypical pneumonia type 37 caused by this virus?
Adenovirus
Termed Coxsackie, is transmitted fecal to oral and causes several diseases-myocarditis, pleurodynia, vesicular rash...
Enterovirus
Virus known as Varicella-Zoster that causes chicken pox (trunk) and shingles
Herpes zoster - virus held in check via CMI
What causes epidemic diarrhea in infants
Rotavirus
What is the mortality rate of Variola virus?
30%
What is a preventative of Ab production or the failure to seroconvert to Anti-HBe? And Anti-HBs?
Chronic carrier state and chronic liver damage; chronic infection of HBV (HBs)