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704 Cards in this Set

  • Front
  • Back
Protozoa, single-celled or multicellular?
Single-celled
Metazoa, aka?
Helminths
Metazoa, single-celled or mulicellular?
Multicellular
Name the three types of helminths we discussed
Cestodes, trematodes, and nematodes
Cestodes, aka?
Segmented worms
Trematodes, aka?
Flatworms
Nematodes, aka?
Roundworms
Hexopoda, aka?
Lice, 6 legs, eg. crabs
Arachnida, aka?
Mites, 8 legs, eg. scabies
Most prevalent parasitic infection worldwide
Toxoplasmosis
What are the four species of Plasmodium causing malaria? (that we are concerned with)
P. Falciparum, P. Vivax, P. Ovale, P. malariae
Life-stage of Plasmodium injected into human by mosquito
Sporozoites
Plasmodia infecting liver cells is in this life-cycle
Exoerythrocytic cycle (out of blood)
Life-stage of plasmodia developing in hepatocytes
Merozoites
Life-stage of Plasmodia in blood cells
Ring-form trophozoites
Red cells infected with plasmodia that has undergone replication cycle(s)
Schizont
Life-stage of plasmodia taken up by uninfected mosquito that will allow for infection of new host
*gametocyte
Species of Plasmodium that typically causes more rapid disease onset
P. falciparum
RBCs that can be infected by P. falciparum
All stages of RBC development
Does P. falciparum persist in liver after main bout of infection?
No
Can many stages of life-cycle be seen in RBCs infected with P. Vivax?
Yes
Which species can be identified in a blood smear by visible schizonts? (P. falciparum or P. vivax)
P. vivax
Main problem with malaria
anemia
Which species of Plasmodium shows >3% infection of RBCs on a blood-smear
P. falciparum
Which species of Plasmodium shows >1 ring-form trophozoite in a given RBC
P. falciparum
Two nuclear "dots" in a ring-form trophozoite is characteristic of what Plasmodium species
P. falciparum
What are the life-stages of P. falciparum visible in the blood
Ring-form trophozoite, and gametocyte
Differentiate between P. falciparum and P. vivax gametocytes
P. falciparum - small, banana shaped
P. vivax - large, diffuse
An added danger from P. falciparum
Microthrombi (brain especially)
Which plasmodium is associated with drug resistance
P. falciparum
Is babesia endemic in the US?
Yes
Transmission of babesia is through?
Ticks
Person at increased risk of severe reaction to babesia infection might have
Splenectomy, immunosuppression
Leishmania is transmitted by
Sand-flies
Life-stage of leishmania causing initial infection
Promastigote
Three main species of Leishmania
L. tropica, L. braziliensis, L. donovani
What cell type is the main target of Leishmania
Macrophages
What life stage of Leishmania multiplies in macrophage
Intracellular amastigotes
Leishmania tropica is characterized by (externally apparent)
Progressive lesion, non-responsive to standard antibiotics
Leishmania is diagnosed by
Biopsy of lesion edge, presence of macrophages with intracellular asmastigotes
Leishmania amastigotes can be identified by
presence of a "bar" (mitochondrion)
What is a characteristic of L braziliensis that differs from other species?
Can escape blood and infect mucosal tissues
What is characteristic of L donovani that differs from other species?
Causes a "higher level", disseminated infection - Kala-azar dermal reaction
What part of the adaptive immunity is protective against Leishmania infections?
Th1 cells, (Th2 for Kala-azar of donovani infection)
How does Trypanosoma transfer from its insect vector into a person
Trypomastigotes are present in kissing bug defecation and invade bite site or mucosa
What life-stage is Trypanosoma in when it infects an individual?
Trypomastigote
What type of cells will T. cruzi infect?
All nucleated cells
What life-stage of T. cruzi generally resides in tissue?
Amastigotes
What life-stage of T. cruzi can be found in circulating blood?
Trypomastigotes
What are some of the pathologies associated with T cruzi infections
Cardiomegaly, megacolon, megaesophagus (and chagoma (swollen face))
What are some common symptoms of acute Chagas disease (T cruzi infection)
Fever, malaise, anorexia, edema, myocarditis, meningoencephalitis
What is the intracellular life-stage of T cruzi?
Amastigote
How can the intracellular amastigote of T cruzi be identified histologically?
Presence of a large mitochodrion within amastigote cytoplasm
Which aspect of the adaptive immunity helps give the most protection against T cruzi infections?
?Th1 cells?
How are Trypanosoma brucei gambiense and T.b. rhodesiense transmitted?
Tsetse fly bites
What life stage is T. brucei in when it infects an individual
metacyclic trypanosome
Where does the infection from T. brucei present
Chancre forms in bite wound
Are there any intracellular stages with the African trypanosoma (T. brucei)?
No
Encephalomyelitis caused by T brucei can result in
Sleepiness (African Sleeping Sickness)
What is winterbottom sign and what is it associated with?
Enlarged cervical lymph node, caused by T brucei
What is special about T brucei's relationship with immune responses?
Surface antigen variation, causes recurrent "waves" of parasitemia
How is Toxoplasma gondii transmitted?
Animal feces, especially cats.
What parasitemia is often associated with owning cats
Toxoplama gondii
What life-stage is T gondii transmitted to humans in
Oocyst
What life-stage of T gondii infects liver cells
Tachyzoites
What pathologies are associated with a Toxoplasma gondii infection
Brain lesions, chorioretinitis, hepatitis, lymphadenitis
What are the risks to a fetus with a mother newly infected with toxoplasma
Congenital hydrocephalus, mental retardation
How is Entamoeba histolytica transmitted?
Fecal-oral transmission
What life-stage is Entamoeba histolytica transmitted to a new individual in?
Quadranucleate cysts
What pathologies are associated with E hystolitica
Liver abscess, brain abscess, flask-shaped ulcers in colon
What life-stage of E histolytica invades colon tissue
Trophozoites
What are the histological indicators for E histolytica over other protozoa?
Dark staining ring around nucleus, and phagocytosed RBCs
How is Giardia lamblia transmitted?
Fecal-oral pathway
What life-stage is G lamblia in when transmitted to an individual
Quadranucleate cyst
What life-stage of G lamblia infects surface of intestinal villi?
Trophozoite
What histological changes does a G lamblia infection cause
flattening of intestinal villi
What symptoms are commonly associated with a G lamblia infection
Explosive, watery diarrhea
What part of the adaptive immunity is protective against a giardia infection
Secretory IgA
How is Cryptosporidium parvum transmitted
Fecal-oral transmission
What life-stage is Cryptosporidium parvum transmitted in
Sporulated oocyst
What life-stage of Cryptosporidium parvum begins the spreading of infection to intestinal epithelia
Sporozoites
On intestinal surface Cryptosporidium parvum does what
Undergoes sexual cycle, making macrogamont which releases oocysts
What does Cryptosporidium parvum cause
Severe diarrhea
What can Cryptosporidium parvum cause in immunosuppressed individuals
Wasting syndrome
What is the mode of transmission for Trichomonas vaginalis
Sexual intercourse
What life-stage is Trichomonas vaginalis usually transmitted in
Trophozoite
What type of pathogen is Trichomonas vaginalis
Extracellular GU pathogen
Which microorganism has either DNA or RNA (not both)
Viruses
Are the ribosomes in bacteria the same ours?
No
Are the ribosomes in fungi the same as ours?
Yes
Are the ribosomes in viruses the same as ours?
Trick question, viruses don't have ribosomes
Describe the outer surface of a bacteria
rigid wall, coated in peptidoglycan
Describe the outer surface of fungi
chitinous, rigid wall
Describe the outer surface of viruses
protein capsid
lipoprotein envelope
Describe the outer surface of protozoa/helminths
flexible membrane
What is the target of many antibiotics (ie penicillin)
peptidoglycan layer of wall
Do bacteria have a nucleus?
No, they have a nucleoid
Describe transcription/translation in bacteria and its significance
Transcription and translation are coupled, can occur at same time in same place, yields fast production and rapid growth
Describe transcription/translation in bacteria and its significance
Transcription and translation are coupled, can occur at same time in same place, yields fast production and rapid growth
How many chromosomes are in a typical bacteria?
One
Describe the membrane bound organelles in a typical bacteria
There are none
How many chromosomes are in a typical bacteria?
One
List the components of a Gram-positive bacterial cell wall
Protein, multiple layers of peptidoglycan, teichoic acid, lipoteichoic acid
Describe the membrane bound organelles in a typical baceria
There are none
List the components of a Gram-positive bacterial cell wall
Protein, multiple layers of peptidoglycan, teichoic acid, lipoteichoic acid
List the components of a Gram-negative bacterial cell wall
Lipopolysaccharide, outer membrane, wall peptidoglycan, cell membrane
List the components of a Gram-negative bacterial cell wall
Lipopolysaccharide, outer membrane, wall peptidoglycan, cell membrane
Describe transcription/translation in bacteria and its significance
Transcription and translation are coupled, can occur at same time in same place, yields fast production and rapid growth
Describe transcription/translation in bacteria and its significance
Transcription and translation are coupled, can occur at same time in same place, yields fast production and rapid growth
How many chromosomes are in a typical bacteria?
One
How many chromosomes are in a typical bacteria?
One
Describe the membrane bound organelles in a typical baceria
There are none
Describe the membrane bound organelles in a typical bacteria
There are none
List the components of a Gram-positive bacterial cell wall
Protein, multiple layers of peptidoglycan, teichoic acid, lipoteichoic acid
List the components of a Gram-negative bacterial cell wall
Lipopolysaccharide, outer membrane, wall peptidoglycan, cell membrane
List the components of a Gram-positive bacterial cell wall
Protein, multiple layers of peptidoglycan, teichoic acid, lipoteichoic acid
List the components of a Gram-negative bacterial cell wall
Lipopolysaccharide, outer membrane, wall peptidoglycan, cell membrane
What color do Gram-positive bacteria stain?
Purple
What color do Gram-negative bacteria stain?
Pink/red
Which type of bacteria have porins? (Gram-positive/negative)
Gram-negative
What main molecular subunits make up the peptidoglycan glycan chains?
N-acetylglucosamine (NAG), and N-acetylmuramic acid (NAM)
How do antibiotics like penicillin function?
By blocking the peptido-glycan cross-linking
What is the toxic component of LPS?
Lipid A
What are the main components of the LPS molecule on a bacterial cell wall?
Lipid A, Core polysaccharide, O-specific chain polysaccharide
Which type of bacteria will have LPS in their cell wall
Gram-negative
Are their introns in bacterial DNA?
No
Are there exons in bacterial DNA?
Yes
What are bacterial capsules made of?
Polysaccharides
Name a bacteria that does not have a capsule
Anthrax (?actual name? anthracine?)
Pneumococcal and meningiococcal vaccines target what bacterial structure
Polysaccharide of capsule
Gram-positive cocci include
Streptococcus and staphylococcus
Gram-positive, spore-forming rod, that is aerobic
Bacillus (anthrax)
Gram-positive, spore-forming rod, anaerobic
Clostridium
Gram-positive, non-spore-forming rod, nonfilamentous
Cornybacterium, Listeria
Gram-positive, non-spore-forming rod, filamentous
Nocardia
Gram-negative cocci
Neisseria
Gram-negative rod, facultative, straight, respiratory
Haemophilus, bordetella, legionella
Gram-negative rod, facultative, straight, zoonotic
Brucella, Francisella, Pasturella, Yersinia
Gram-negative rod, facultative, straight, enteric
E.coli, Enterobacter, Serratia, Klebsiella, Salmonella, Shigella, Proteus
Gram-negative rod, facultative, curved
Campylobacter, heliobacter, Vibrio,
Gram-negative rod, aerobic
Pseudomonas
Gram-negative rod, anaerobic
Bacteroides
Extracellular, acid fast
Mycobacteria
Obligate intracellular
Rickettsia, Chlamydia
Flexible, thin-walled bacteria ?spirochetes?
Treponema, Borrelia
Wall-less cells
Mycoplasma
Describe basic composition of normal flora
mostly bacteria, some fungi
Normal flora of skin
Staphylococcus epidermidis
Normal flora of nose
Staphylococcus aureus
Normal flora of mouth
Viridans streptococci
Normal flora of dental plaque
Streptococcus mutans
Normal flora of gingival crevices
various anaerobes; Bacteroides, fusobacterium, streptococci, actinomyces
Normal flora of throat
Viridans streptococci
Normal flora of colon
Bacteroides fragilis, Eschericha coli
Normal flora of vagina
Lactobacillus, E.coli, group B strep
EXAM QUESTION
What part of the adaptive immune system mainly handles pyogenic infections
Humoral
Granulomatous infections are normally handled by what part of the adaptive immunity?
Cell-mediated
Define virulence
quantitative measure of pathogenicity (number required to cause infection), infectious dose
Define reservoir
normal habitat of organism
Define fomites
inannimate objects that can be a source of transmission
List the stages of bacterial pathogenesis
Transmission, Evasion, Adhesion, Colonization & Spread, Damage, Response, Progression or Resolution of disease
Do certain Gram-positive or -negative bacteria produce exotoxin
Either can
Do gram-positive or -negative bacteria produce endotoxin
Most Gram-negative (LPS)
Is exotoxin secreted from the cell
Yes
Is endotoxin secreted from the cell
No (LPS released during breakdown of bacterial cell wall)
What type of molecule is exotoxin
Polypeptide
What type of molecule is endotoxin
Lipopolysaccharide
Where are the genes located for exotoxin
Plasmid or bacteriophage
Where are the genes located for endotoxin
On the bacterial chromosome
Which is relatively more toxic exotoxin or endotoxin?
Exotoxin
Clinical effects of endotoxin
Fever, shock
Mode of action of endotoxin
Includes TNF and IL-1
Antigenicity of exotoxin
Induces high-titer Abs called antitoxins
Antigenicity of endotoxin
Poorly antigenic
What is more heat-stable, endotoxin or exotoxin
endotoxin
List Koch's postulates
1) Must always be found in similarly diseased animals, not in healthy ones. 2) Must be isolated from diseased animal and grown in pure culture. 3) Isolate must cause original disease in inoculated susceptible animal. 4) Must be reisolated from experimentally infected animal
Name a bacteria that is considered to be uniformally penicillin resistant worldwide
Neisseri gonorrhoeae
Is antibiotic resistance an acquired trait?
Y-E-S!
What drug can be combined with certain antibiotics to increase their efficacy?
Augmentin
What can chloramphenicol cause?
Aplastic anemia
What is synergism?
Combined antibiotic therapy
List four reasons why bacteria may be drug resistant
They acquire genes that encode resistance, Develop resistance on their own by mutation, Natural resistance, Pharmacokinetic factors
What are plasmids?
Small circular pieces of episomal (outside of chromosome) DNA
Would it be appropriate to call the structure of plasmids "modular"
Why of course
What is the only important part of a plasmid in order for it to exist
The site controlling replication, copy number, and incompatibility
What are the four main module types that are found on a plasmid
Replication, Conjugation, Mobilization, Passenger Genes
What is conjugation as it relates to bacteria?
Bacterial sex
Is conjugation species specific?
No, not really
How do genes end up on plasmids?
Transposons, jumping genes
What are transposons?
Short segments of DNA that have the ability to move from one length of DNA to another
What are the essential parts of a transposon?
Enzyme (transposase), specific labelling terminus (inverted repeats)
Can antibiotic resistance genes become associated with transposons?
Yes, we believe that this is part of how these genes can be transferred
What is a potential mode of long-distance transmission of genes in bacteria
Phage transmission
What is a phage
A bacterial virus
If a patient has a susceptible strain to an antibiotic and adheres to the prescribed treatment are they likely to develop resistance? Why?
No, acquisition is a rare event
Will prophylactic administration of antibiotics promote the occurrence of resistance?
Data suggests no
If a patient initially responds to antibiotics and then becomes more ill, what most likely happened
Infection from a second type of microbe ( as in nosocomial infection)
What is the number one predictor of having a drug resistant ear infection
The patient has used that antibiotic previously
Main weapons against antibiotic resistance?
Decreased use and appropriate use (removal of selective pressure)
What is the number one cultured bacteria in a microbiology laboratory?
Staphylococcus
What do staphylococci look like on a gram-stained slide?
Gram-positive (purple), cocci (rounded), in clusters. Look like bunches of grapes
Gram-stain of staphylococci
Gram-positive
If you have gram-positive cocci that are catalase positive, what might you have
Staphylococcus (?or micrococcus?)
If you have gram-positive cocci that are catalse negative, what might you have?
Streptococcus or enterococcus
How would you differentiate between Staph aureus and other Staph (eg S. epidermidis)
Coagulase test. (+) = S. aureus, (-) Coagulase negative (eg. S. epidermidis)
Is S. aureus hemolytic or non-hemolytic
hemolytic
Staphylococci are normal flora of what parts of the body
Anterior nares, Mucous membranes, skin, GI tract, vagina
List some of the virulence factors of S. aureus
Protein A, Fibronectin-binding protein, Hemolysins, PV Leukocidin, Secreted enzymes (lipases, proteases, DNAses, Hyaluronidase, Catalase, Coagulase)
What is Protein A of S aureus and what is its significance
Major cell wall protein, binds Fc of IgG and prevents complement activation, reducing opsonization and phagocytosis
What is the significance of fibronectin-binding protein in S aureus
Assists as adhesion factor and helps colonize host
If you have a patient with S aureus expressing PVL, where was it acquired
Community acquired MRSA
S aureus expressing PVL is associated with what diseases
Skin infections, furunculosis, severe hemorrhagic pneumonia
What does hyaluronidase do
hydrolyzes matrix of connective tissue
What does catalase do
converts H2O2 to H2O, may counteract neutrophil attack
What does coagulase do
converts fibrinogen to fibrin (via prothrombin activation), May help prevent phagocytosis through poor WBC motility in fibrin clots
What are the S aureus superantigen toxins
Stephylococcal Scalded Skin Syndrome Toxin (SSSS), Toxic Shock Syndrom Toxin (TSST-1), Enterotoxins A-G
What chemicals cause food poisoning from S aureus
Enterotoxins A-G, heat stable
What bacteria can cause impetigo
S aureus or Group A Strep
What is erysipelas
Superficial cellulitis of skin with prominent lymphatic involvement
With endocarditis caused by S aureus, what might one see on a patient
Janeway spots, small embolic skin lesions
What is SSSS caused by
exfoliative toxins ETA and ETB (in infants)
What are the symptoms of TSST-1
High fever, rash resembling sunburn, desquamation, vomiting, diarrhea, hypotension, multi-organ involvement
Short-onset food poisoning suggests
S aureus
Is S aureus susceptible to penicillin
No, most strains are resistant
What protein incurs penicillin resistance in S aureus
beta-lactamase
Can coagulase negative Staph (CONS) cause infection
Yes, they are opportunistic
Which coag. neg. Staph. is often associated with UTIs
S saprophyticus
Which coag. neg. Staph. is often associated with infections of implanted artificial devices? Why?
S. epidermidis, produces "slime layer" which facilitates adherence and is a barrier to antibiotics
Which Strep. are beta-hemolytic
Group A strep, Group B strep
Streptococci will have which result for a catalase test?
Negative
What does beta hemolysis mean?
Complete hemolysis
What determines a streptococcus "group"
Carbohydrate antigens on cell surface
What does alpha hemolysis mean
Incomplete hemolysis, can see a "greening" on a blood-agar plate
What is the "real" name for Group A Strep?
S. pyogenes
What is the "real" name for Group B Strep?
S. agalactiae
S. pyogenes is also known as
Group A strep
S agalactiae is also known as
Group B strep
What is the habitat for Group A strep
Skin and mucous membranes
What is the habitat for Group B strep
GI tract, vagina, urethra
What is the habitat for S. pneumoniae
nasopharynx
Enterococci and Group-D non-enterococci are found in
GI tract
Viridans strep are found in
mouth, gums, teeth
What is the appearance of streptococci on a gram-stained slide
Gram positive (purple), cocci (rounded), in chains
Which Strep is bacitracin susceptible
Group A (S pyogenes)
Describe some important S. pyogenes exotoxins
Spe A & C (superantigens), Spe A,B,C cause scarlet fever
Streptococcal pyrogenic exotoxins are involved in
pathogenesis of strep. toxic shock syndrome, necrotizing fasciitis
How does S pyogenes prevent attraction of phagocytic cells to infection site
C5a peptidase
What does streptokinase do
Dissolves clots
What virulence factor(s) do Strep and Staph have in common?
Hyaluronidase
Describe some ways that S pyogenes infectionscause damage
Supprative - direct damage by organism and secreted enzymes, Post-infectious sequelae - from autoimmune response cause by strep Ags, Toxin-mediated - strep exotoxins secreted into bloodstream
What is the number one cause of bacterial pharyngitis
Group A strep (S pyogenes)
What are the symptoms indicative of a Group A strep caused pharyngitis
Red throat, petechiae on soft palate, grayish-whitish tonsillar exudates, enlarged and tender anterior cervical lymph nodes
A patient presents complaining of a sore throat, you note a reddening of the pharynx, petechiae on soft palate, gray-white tonsillar exudate and enlarge lymph nodes... diagnosis?
Bacterial pharyngitis caused by S pyogenes (Group A)
S pyogenes is associated with what post infectious sequelae
Acute rheumatic fever, and Acute glomerulonephritis
What is a major reason to treat an S pyogenes infection in throat
Prevention of acute rheumatic fever (NOT acute glomerulonephritis)
What are some indicators of scarlet fever?
Recent (?or current?) infection of S pyogenes followed by a "sandpaper-type" rash beginning on torso and spreading, white strawberry tongue proceeded by a red/pink strawberry tongue
What are some diseases that Group B strep can cause and in whom
Sepsis, meningitis, and pneumonia in newborns, elderly, and immunocompromised
What function does the polysaccharide capsule of S agalactiae serve
antiphagocytic
Is S pneumoniae alpha, beta, or non-hemolytic
Alpha
Which Strep is optochin sensitive
S pneumoniae
How would S pneumoniae appear on a gram-stained slide
Gram-positive (purple), diplococci (two rounded attached circle)
On a culture of S pneumoniae with an antibiotic disc, what does the P stand for
Pneumococcus (testing for optochin sensitivity)
What bacteria is a common cause of otitis media
S pneumoniae
What is the most common cause of bacterial pneumonia
S pneumoniae
What is the number one virulence factor for S pneumoniae
Its polysaccharide capsule
What part of the adaptive immunity is protective against S pneumonia infection
Humoral/Antibodies directed against the capsule
Other than its capsule, what is a virulence factor for S pneumoniae
Autolysins allowing release of pneumolysins that attack mammalian cell membranes
You have a alpha-hemolytic strep. that is optochin resistant, what might this be
Viridans streptococci
What is the major risk of viridans (oral) strep.
endocarditis
How would enterococci appear on a gram-stained slide
Gram-positive (purple), cocci (rounded) in pairs and short chains
Which gram-positive cocci (that we have discussed) is bile salt tolerant
Enterococci
Enterococci are important causes to consider in which diseases?
UTIs, endocarditis, intra-abdominal infections, bacteremia
What are two species of enterococci that are commonly seen
E. faecalis and E. faecium
Are groups A,B,C, and G beta-hemolytic strep penicillin susceptible?
Yes
What common antibiotics might S pneumoniae be resistant to?
Penicillin, erythromycin, clindamycin, trimetoprim/sulfamethoxazole
Metazoa (Helminths) have what three main life-stages
Eggs, larvae, adults
What type of immunity is associated with controlling helminthic infections
Type 2 immunity. Eosinophilia
Describe the main characteristics of nematodes
Nonsegmented roundworms, separate sexes, four larval molts
What are the main infections caused by nematodes (generalized)
Intestinal and tissue infections
Ascaris lumbricoides in known commonly as
giant roundworm
How is Ascaris lumbricoides acquired in humans
Eggs are ingested from soil or improperly prepared foods
Where do the larvae of Ascaris lumbricoides hatch and where do they travel to (first)
Small intestines, travel through blood to liver and then on
Describe the path of migration of Ascaris lumbricoides after hatching
Small intestines, liver, heart, lung capillaries, alveolar space, up trachea, reswallowed into small intestines
How does an ascaris lumbricoides infection result in pneumonitis
Th2 induced eosinohpilia in alveolar tissue caused by larval stage passing through can cause inflammation
What is the major interleukin associated with the Th2 response to an helminthic infection
?IL-5?
How is a Trichuris trichiura infection acquired
eggs are ingested from soil
Where do the larvae of a Trichuris trichiura hatch
Hatch in small intestine
Does Trichuris trichiura invade body tissues?
No
Does Ascaris lumbricoides invade body tissues
Yes (or at least they will puncture through tissues to get where they're going)
Where do adult Trichuris trichiura mature
Large intestine
Where do Trichuris trichiura females "like" to lay their eggs? What does this cause
Eggs lain around pararectal tissues, causes intense inflammation and can lead to a prolapsed rectum
What is the common name for Trichuris trichiura?
Whip worm
What is the common name for Enterobius vermicularis?
Pin worm
How is an Enterobius vermicularis infection acquired?
Eggs contaminate fingers or surfaces and are then ingested
Where do Enterobius vermicularis larvae hatch
Small intestine
Where do adult Enterobius vermicularis mature?
Large intestine
Do Enterobius vermicularis invade body tissues?
no
What is the common name for Strongyloides stercoralis
Threadworm
How is a Strongyloides stercoralis infection acquired?
Larvae penetrate unbroken skin, perhaps through hair follicle
Describe the pathway that Strongyloides stercoralis larvae will travel before becoming an adult?
Skin, Blood, Lungs, Up trachea, Small intestines
What is a life-threatening complication of Strongyloides stercoralis in certain individuals
In immunocompromised, eggs can hatch in intestines and invade large intestines leading to autoinfection and potentially hyperinfection and/or lead to bacterial sepsis
What is the common name for Necator americanus
Hookworm
How does Necator americanus enter the body?
Larva penetrates unbroken skin (like Strongyloides stercoralis)
Describe the pathway that Necator americanus takes once it enters the body
Skin, Bloodstream, Lungs Trachea, Small intestines
Where do the adults of Necator americanus mature
Small intestine
What is a particular complication of Necator americanus infection
Anemia due to metabolic demands put on body
What is a difference that might be seen in a CBC between intestinal nematodes and tissue nematodes?
Elevated peripheral eosinophils with tissue nematodes
How does Trichinella spiralis enter the body
Larvae are ingested in undercooked meat
Describe the immediate events of Trichinella spirallis after entering the body
Larvae released from nurse cells while in stomach, larvae enter small intestine and mature into adults
How do female Trichinella spiralis "give birth" to progeny
Newborn larvae are "shed" from female
What happens to Trichinella spiralis larvae born in the small intestines
Enter lymph, travel through bloodstream to various tissues
What are some very serious pathologies associated with trichinella spiralis infection
Heart failure and CNS damage ?due to severe inflammation?
How does Dracunculus medinensis enter the body?
Ingested as larvae inside copepods
Once in the body, how does a Dracunulus medinensis infection proceed
Larvae freed from copepods in small intestine penetrate intestinal wall then abdominal wall entering subcutaneous tissues and maturing to adults
Where do adult Dracunulus medinensis reside and what happens to their progeny
Adults mature in subcutaneous tissue and lymph nodes and larval progeny are released from blister
What is the main clinical manifestation of a Dracunulus medinensis infection
Lymphedema from blocked lymph nodes
What Metazoan infection might someone with dogs or cats be at risk for
Toxocara canis/cati
How does Toxocara canis/cati spread to humans
Eggs from dog/cat are ingested by human
Where do Toxocara canis/cati larva hatch
Small intestine
What do Toxocara canis/cati larva do once hatched
Penetrate intestinal wall and migrate via bloodstream. Disseminate similarly to Trichinella spiralis
What are the complications associated with Toxocara canis/cati
Intense inflammation in body tissues like the eye, CNS, and liver ~ 1 month after ingestion
How does Wuchereria bancrofti enter the body
Infected mosquito bites and deposits larvae on skin which enter through bite wound
Once in the body, how does Wuchereria bancrofti spread
from skin larvae enter lymphatics where adults mature, microfilariae then enter bloodstream at night
What is one possible complication of Wuchereria bancrofti
Sever lymphedema (elephantiasis)
How does Onchocerca volvulus enter the human body
infected blackfly deposits (vomits) larvae on skin which enter through bitewound
Where do Onchocerca volvulus mature into adults
within subcutaneous tissues and release microfilariae
What is a potential complication of Onchocerca volvulus
Blindness when larvae are deposited near eye causing intense Th2 response
How does Loa loa enter the human body
Infective fly deposits larva during meal onto skin and larvae enter through bite wound
Where do adult Loa loa mature
Subcutaneous tissues
When do adult Loa loa release microfilariae into blood
During the day (opposite of Wuchereria)
What are the intermediate hosts for trematodes (in general)
Snails and shellfish
What are some general characteristics of trematodes
Nonsegmented flatworms (flukes), adults have two suckers
What is the infectious stage of trematodes for shelfish
"Miracidia"
What is the infectious stage of trematodes for mammals
"Cercaria"
What is the common name for Schistosoma mansoni/japonicum
Blood/liver fluke
What is the common name for Schistosoma haematobium
Blood/bladder fluke
What is the common name for Clonorchis sinensis
Oriental liver fluke
What is the common name for Paragonimus westermani
Lung fluke
How does Schistosoma mansoni enter the body
Generally, from snail or shellfish, cercariae enter skin, such as through hair follicle
Path of Schistosoma mansoni after entering body
From skin, migrate to lungs the to liver
Where do adult Schistosoma mansoni live
Liver venules (in "constant copulation")
How do Schistosoma mansoni eggs laid in liver venules escape body
Proteases dissolve path either through biliary tree to intestine or directly to intestine, passed in feces
What are some complications of Schistosoma mansoni infection
Hepatitis leading to cirrhosis, portal hypertension
What is an identifying feature of Schistosoma mansoni in a stool sample
A lateral spine on the egg
How does a Schistosoma japonicum infection differ from a Schistosoma mansoni infection?
Larval forms may penetrate into other tissues causing problems other than hepatosplenomegally, CNS issues, cardiopulmonary issues, also possible for transverse myelitis. Otherwise the same
How does a Schistosoma haematobium infection differ from a Schistosoma mansoni infection?
Adults migrate to bladder and live in venous plexus releasing eggs into bladder/urine (different subsequent complications)
What are some complications of S haematobium?
Bladder inflammation/calcification and cancer
If you think your patient has Schistosoma haematobium, what should you order to confirm this diagnosis
Urine sample test
How does Clonorchis sinensis enter the body
Undercooked infected fish with metacercaria is ingested
Describe the events after Clonorchis sinensis enters the body
Larvae hatch in small intestine, larva enters bile ducts and adults mature there
How does Clonorchis sinensis cause issues
adults and their released eggs cause biliary obstructions
How does Paragonimus westermani enter the body
Consumption of raw or undercooked shellfish
What are the events after Paragonimus westermani enters the body
Worms hatch in small intestine, adults mature in lung, eggs released in lungs as cyst
How do paragonimus westermani eggs escape the body
Eggs dissolve path into alveoli and are coughed up
What tests would you order for a patient you suspected of having Paragonimus westermani
Sputum test
What are some basic characteristics of Cestodes (tapeworms)
They are segmented flatworms, have a scolex (head), and proglottids (body segment, infectious units)
How is Taenia saginata contracted
Cysticerci are ingested in undercooked beef
Where do cysticerci escape and mature
Escape in stomach, worms live and mature in small intestine
How does Taenia saginata resist peristaltic contractions forcing it out of the body
Scolex has four suckers which hold onto intestinal wall
How does Taenia solium differ from Taenia saginatum
T solium is from pigs and if you are infected with a gravid proglottid or eggs, onchospheres hatch in small intestine, penetrate tissues and form cysticercus in body tissues = inflammatory or scarring issues
What is cysticercosis
Infection from Taenia solium infecting various body tissues
What is a possible CNS issues caused by cysticercosis
Grand mal seizure
How does Diphyllobothrium latum differ from Taenia saginata
Contracted from fish
How is Echinococcus granulosus contracted
Eggs are ingested, passed from animal to human
Describe the events immediately after Echinoccocus granulosus enters the body
Oncospheres hatch in small intestine then enter bloodstream and penetrate tissues where cysts develop
What is the most common cause of significant pneumonia in a newly diagnosed AIDS patient
Pneumocystis
What should you think about/consider when an immunocompromised (HIV/AIDS) patient presents with a GM seizure
Toxoplasmosis
What are the two main Neisseriae that we are concerned with?
N. gonorrhoeae & N. meningitidis
What is the appearance of Neisseria on a Gram-stained slide?
Gram-negative (pink), diplococci (paired round), opposing ends flattened in kidney bean appearance
What are some general features of Neisseria
Gram-neg., diplococci, oxidase (+), strict aerobes, require added CO2 and enriched medium for growth
Are Neiserria aerobes/anaerobes, oxidase (+)/(-), Gram (+)/(-)
Strict aerobes, oxidase (+), Gram-neg.
What is gene conversion, as it relates to bacteria (ie N gonorrheoeae)
Recombination and shuffling of genes so that bacteria can express multiple pilins with different AA sequences
What role to pili play in N gonorrhoeae
Major virulence factor, enhance attachment of bacterium to host epithelial and mucosal cell surface, also inhibit phagocytosis
What are the major virulence factors of N gonorroeae
Pili, Outer membrane proteins (OMP I and OMP II, inhibit complemnet, promote invasion), IgA protease
What is the primary manifestation of a non-disseminated N gonorrhoeae infection
Pain and purulent discharge
What are the possible results of an N gonorrhoeae infection in men? Women?
Men-urethritis
Women-cervicitis, salpingitis, PID (could lead to ectopic pregnancy or sterility)
What can be the manifestations of a disseminated N gonorrhoeae infection
Fever, polyarthralgia, rash
Other than reproductive organs, where might one observe an N gonorrhoeae infection
Within the rectum or pharynx
What is a risk to a baby being born to a mother with gonorrhea?
Gonococcal ophthalmia neonatorum, prevent with eyedrops at birth
What is presumptive evidence for a N gonorrhoeae infection in males?
Gram stain of uretral exudates showing intracellular gram-negative diplococci (in females, neither sensitive nor specific)
What is the gold standard for N gonorrhoeae diagnosis?
Nucleic acid amplification
What are some things that help N meningitidis evade the immune system
Pili and IgA proteases
What type of immunity is protective against N meningitidis infection
Antibody to capsule
What is it about N meningitidis that can induce shock
Lipooligosaccharide (LOS), triggers TNF and IL-1
What does LOS on N meningitidis cause
Can induce shock, also activates coagulation system causing disseminated intravascular coagulation
What animal is the only natural host to N gonorrhoeae and N meningitidis
Humans
How is N menigitidis transferred from person-to-person
via close respiratory droplets
In whom do most cases of N meningitidis occur?
Infants and young adults, 3-12 months most at risk
What microbe is Waterhouse-Friderichsen syndrome associated with?
N meningitidis, (endotoxic shock, DIC, bilateral hemorrhagic destruction of adrenal glands, circulatory collapse, death)
Meningiococcemia
Septicemia with petechial rash, associated with N meningitidis
Among survivors of N meningitidis, what are the significant sequelae
Neurological disabilities, amputation, hearing loss
What is echymosis
Coalesceing petechia
How would a N meningitis infection be identified
Gram stain of CSF, Culture of CSF and blood (on chocolate agar and increased CO2)
Is it common for N meningitis to have penicillin resistance
No
What should be done for close contacts of a patient with N meningitis
Prophylactic antibiotics
What are the vaccine option for N meningitis
Polysaccharide-diptheria toxoid conjugate vaccine - MCV4 (11-55yrs), Pollysaccharide vaccine (very young/old)
What are the general characteristics of acinetobacter
Gram-negative coccobacilli, oxidase neg., aerobic (SAME AS MORAXELLA)
What does "exposure" to acinetobacter cause?
Hospital acquired infections, particularly ventilator-associated pneumonia
What are the general characteristics of Moraxella catarrhalis
Gram-negative coccobacilli, oxidase positive, aerobic (SAME AS ACINETOBACTER)
What can a Moraxella catarrhalis infection cause
Otitis media, pneumoniae, conjunctivitis, and rarely CNS and joint infections
Describe the general characteristics of Corynebacteria
Small gram-positive, pleomorphic rods, tend to clump, non-motile, non-encapsulated, non-spore forming
What is the normal habitat of Corynebacteria? exceptions?
Normal flora of skin and respiratory tract, except for C. diptheriae
In what populations does diphtheria occur?
Non-immunized populations
What does C diphtheriae cause and how is it spread?
Causes local infection of throat or skin, spread as respiratory droplet
How does C diphtheriae cause damage
Local and systemic effects of diphtheria toxin which (ultimately) causes inhibition of preotein synthesis in the host
What is the respiratory form of C diphteriae likely to present with
A thick grayish exudate called a pseudomembrane on the tonsils, can obstruct airways
If a patient presents with a swollen neck and a thick grayish, adherent exudate on their tonsils, what might a diagnosis be
Respiratory form of C diphtheriae
What are the generalized symptoms of a C diphtheriae infection caused by absorption of toxin
Myocariditis (leads to congestive heart failure), Reversible paralysis of soft palate or eye muscles (or others), death from respiratory obstruction
Describe how Cutaneous diptheria might appear
Range from simple pustule to chronic non-healing ulcer, resolves with antitoxin Ab formaiton
What other infection does cutaneous diphtheria look like
Anthrax
What is the diphtheria vaccine?
DPT
What is Corynebacterium jeikeium associated with? Why might it be difficult to treat?
Wound infection, septicemia, endocarditis. Usually multi-resistant to antibiotics
What is Corynebacterium urealyticum associate with?
Chronic, recurrent UTIs
Describe the general characteristics of Bacillus anthracis
Gram-positive (purple), bacillus (elongated rod), "boxcar" or bamboo rod arrangement in chains, spore forming
Describe the spores of Bacillus anthracis
oval, central or terminal, do not take up stain
Is Bacillus anthracis hemolytic or non-hemolytic
Non-hemolytic
What is the rod-form of Bacillus anthracis also known as?
Vegetative form
What is germination, as it relates to Bacillus anthracis
Conversion of spores to vegetative (rod) bacilli
What is the process of Bacillus anthracis converting from the vegetative (rod) form into the spore form
Sporulation
What are the three virulence factors of Bacillus anthracis
poly-D-glutamic acid capsule, edema factor, lethal factor
Describe the properties of the capsule surrounding Bacillus anthracis
Composed of poly-D-glutamic acid, neg. charge inhibits phagocytosis by leukocytes
What are the three proteins associated with exotoxins that Bacillus anthracis elaborates
Protective antigen (PA), Edema factor (EF), Lethal factor (LF)
What is the role of protective antigen elaborated by Bacillus anthracis
Mediates internalization of edema factor and lethal factor into host cells
Describe the effect of edema toxin (EF + PA) on cells from Bacillus anthracis
Acts as calmodulin-dependent adenylate cyclase, increases cAMP, changes membrane permeability and EDEMA results
If a patient has inhaled Bacillus anthracis, what might one expect to see as a result
Widening of mediastinum with pleural effusions without infiltrates... (edema)
Describes the effect of Lethal toxin (LF + PA) on cells from Bacillus anthracis
Zinc dependent protease that interferes with signaling pathways of major phagocytic cells and can induce apoptosis and necrosis, hemorrhagic necrosis in tissues)
What are the three clinically presenting forms of anthrax
Cutaneous, Inhalational (Pulmonary), Gastrointestinal
How might a person acquire gastrointestinal anthrax
Consumption of contaminated materials such as with rotting meat
What is the appearance of cutaneous anthrax
Papule that develops into a painless black/red pustule - eschar
What are the early symptoms of an inhalational Bacillus anthracis infection
Malaise, fatigue, myalgia, mild fever, non-productive cough "FLU-LIKE"
What are the intermediate symptoms of an inhalational Bacillus anthracis infection
Positive blood cultures, mediastical lymphadenopathy, hemorrhagic pleural effusions (require drainage), severe dyspnea, hypoxemia, cyanosis, tachydcardia
What are the late fulminant symptoms of an inhalational Bacillus anthracis infection
Respiratory failure requiring intubation, meningitis, shock, high fatality rate
How might you sample to diagnose a Bacillus anthracis infection in each of its three forms
Cutaneous - swab of vesicle fluid, elcer/eschar
Inhalational - blood (CSF in meningeal)
Gastrointestinal - feces, vomitus, blood
What cells does Listeria monocytogenes infect
Monocytes, it's in the name
Describe the characteristics of Listeria monocytogenes
Gram-postive rod with "Chinese character clumping" pattern, may look like cocci in pairs, Catalase positive, tumbling motility at room temp
What might Listeria monocytogenes on Gram-stain be confused with? How can you tell the difference
Group B streptococcus. Listeria is catalase positive
Is Group B strep catalase positive or negative
Negative
Is Listeria catalase positive or negative
Positive
What would be seen on a blood agar culture of Listeria monocytogenes
Beta-hemolysis
Does refrigeration suppress Listeria growth
No
What species of Listeria will infect humans
Only L monocytogenes
What is a risk of unpasteurized dairy products
Listeria contamination causing food poisoning
Which groups of people are at the highest risk for lysteriosis
AIDS patients (300X), Pregnant women (20X, can be fatal to fetus), others normally at risk for infection
Is listeria an intracellular or extracellular pathogen
Intracellular
What are the steps in pathogenesis of Listeria monocytogenes
Phagocytosis; escape from phagolysosome by listeriolysin O (damages membranes); growth in cytosol and assemply of actin filament tail that form a pseudopod, spread to adjacent cells
After initial infection with Listeria monocytogenes, is there an extracellular stage
No, passes directly from one cell to the next
What are the two most common clinical presentations of Listeria monocytogenes infections
Septicemia and meningitis
What are the risks of a pregnant mother contracting listeriosis (other than normal risks)
Infection of child during birth, can also cause abortion or preterm delivery
Does humoral immunity play a role in fighting a Listeria infection
No
How would Listeria monocytogenes infections be identified in a lab
Culture of blood or CSF
What are the general characteristics of Erysipelothrix rhusiopathiae
Gram-positive filamentous rod, catalse negative
If you have a patient who is a butcher, veterinarian. or fisherman with a skin infection, what might you consider as a cause
Erysipelothrix rhusiopathiae
What bacteria might we have if our patient presents with a gram-positive anaerobic rod
Clostridium
What bacteria might we have if a patient presents with a gram-negative anaerobic rod
Bacteroides
What enzymes that break down toxic oxygen intermediates are anaerobes missing
Catalase, peroxidase, superoxide dismutase, etc.
What might a clostridia species be confused with on a simple gram-stain slide
A bacillus species, must take into account aerobic vs anaerobic
What are the general characteristics of Clostridia
Gram-positive anaerobic spore-forming rods, large & boxcar shaped, catalase negative
What species of Clostridia (that we are concerned with) are found in soil
C tetani, C botulinum
Where is Clostridium perfringens normally found in humans
Normal flora of vagina and GI tract
What pathologies can Clostridium perfringens cause
gas gangrene (myonecrosis), cellulitis, sepsis, food poisoning
What is the most important exotoxin produced by C perfringens and what does it do?
Alpha-toxin, phospholipase activity causing cell lysis,
What is a result of the enterotoxin released by C perfringens
Alters intestinal epithelial permeability, releasing fluid into the lumen
What are some of the enzymes that promote gas gangrene caused by C perfringens
Proteases, DNases, Hyaluronidase, Collagenases... liquefy tissues
Other than Clostridium perfringens, what bacteria might cause gas gangrene (myonecrosis)
Clostridium septicum
What is gas gangrene usually due to?
introduction of clostridium spores into tissues
What are some risks from gas gangrene other than loss of tissue
Toxins may be carried to other organs causing systemic effects such as shock, renal failure, or intravascular hemolysis... death
What is an infection that has been associated with colon cancer
Clostridium septicum
A patient presents with nausea, abdominal cramps, and diarrhea between 8-18 hours after eating at a potluck party, you're thinking food-poisoning (it's not diabetes and not a broken arm). What organism might be responsible?
Clostridium perfringens
Enteritis necroticans (nectrotizing bowel disease) has a high mortality rate, what organism can be responsible for this
Clostridium perfringens
What disease is associated with abortions performed with inadequately sterilized instruments or "illegal abortions", what organism causes this
Clostridial endometritis, caused by C perfringens
What is a notable characteristic of C perfringens on a blood agar culture
A double zone of hemolysis
What is a common cause of botulism in the US
Home canning of foods (improper)
What is a cause of wound botulism
Injection/use of black-tar heroin
Botulism is caused by what organism
Clostridium botulinum
What does botulinum toxin do
Blocks neurotransmitter release of Ach by blocking vesicles, muscle paralysis results
Is the botulinum toxin release by Clostridium botulinum neutralized by stomach acid
No
What are the symptoms of food-borne/classic botulism
double vision, blurred vision, symmetrical paralysis, difficulty swallowing, no fever or signs of sepsis
What is a risk of feeding infants honey
Infant botulism
What are symptoms of infant botulism
Constipation, feeding problems, lethargy, poor muscle tone, possible paralysis and respiratory arrest
An infant presents with constipation, feeding problems, lethargy and poor muscle tone. He is wearing a Winnie the Pooh shirt with a sticky substance on it. What might your diagnosis be
Infant botulism caused by Clostridium botulinum spores in honey
What are the general characteristics of Clostridium tetani
Anaerobic gram-positive, spore-forming, found in soil, animal feces
What are most cases of Clostridium tetani infections caused by
Puncture wounds
What cells does tetanus toxin attack
Peripheral neurons
What does tetanus toxin do
Blocks release of inhibitory neurotransmitter in peripheral neurons, causes unopposed contraction of muscles
What is the vaccine against tetanus toxin
DPT
What does Clostridium difficile cause in humans
antibiotic-associated diarrhea and pseudomembranous colitis
What is the toxin produced by C difficile that is responsible for virulence
Toxin B
What is a risk for the patient after antibiotic treatment to cure a C difficile infection
Relapse
What is the number one nosocomial infection
Clostridium difficile
What is the predominant bacteria found in the human gut
bacteroides
What is an anaerobic gram-negative rod associated with head and neck infections pulmonary infections, brain abscesses, and genital tract infections
Prevotella/Porphorymonas
Fusobacteria are normal flora of what body parts
Mouth, female genital tract, colon, can cause disease at any of these locations
What anaerobic gram-positive rod should be of concern with implantable devices
Propionibacterium acnes
What conditions are associated with gram-negative enteric organisms
Sepsis, Gastrointestinal infections, Urinary tract infections
Almost all gram-negative enteric rods have their reservoirs where (either in humans or animals)
GI tract
What are the seven "F"s and what are they associated with
Feces, finger, flies, food, fluids, fomites, fornication; associated with the fecal oral transmission of gram-negative enteric rods
What is the pathogenesis of gram-negative enteric rods
Toxin mediated or invasive (or both): fluid loss; inflammation/cell death; vascular effects
Enterotoxins from gram-negative enteric rods typically effects what location and causes what
Small intestine, causes watery diarrhea, nausea, vomiting
Invasins released by gram-negative enteric bacteria are typically associated with what location and what can they cause
Large intestines: bloody diarrhea, fever, cramps, leukocytes in stool, immune evasion
What are the laboratory diagnostic tools used in evaluating gram-negative enteric rods
Gram stain, lactose fermentation, H2S production, oxidase reaction, motility, presence of leukocytes in stool,
How might a lactose test (organism grown on MacConkey agar) be helpful in identifying organisms in a stool sample
Differentiating between lactose(+) organisms of normal flora (ie E coli) and lactose (-) organisms that are abnormal (ie Shigela)
What genus might a gram negative anaerobic rod be
Bacteroides, Fusobacterium or Prevotella
What genus might a gram negative cocci be
Neisseria, Moraxella, Acinetobacter
What genus might a fastidious gram negative facultative/aerobic rod found intracellularly be from
Legionella
What genus might a fastidious gram negative facultative/aerobic rod found extracellularly be from
Haemophilus, Bordetella, Campylobacter, Helicobacter
What genus might a gram negative facultative/aerobic that is oxidase positive be from
Pseudomonas, Vibrio, Campylobacter, Helicobacter
What genus might a gram negative facultative/aerobic that is oxidase negative and lactose positive be from
Klebsiella, Enterobacter, Serratia, Citrobacter (also E coli)
What genus might a gram negative facultative/aerobic that is oxidase negative and lactose negative be
Salmonella, Shigella, Proteus, Yersinia
What species (and type) might a gram negative facultative/aerobic that is oxidase negative, lactose positive and sorbitol negative be
E coli O157:H7
What genus might a gram negative rod that is urease positive be from
Proteus, Klebsiella, Helicobacter, Ureaplasma
What are the Enterobacteriaceae?
Facultative, oxidase neg, ferment glucose: E coli, Salmonella, Shigella, Proteus, Yersinia
Describe the Vibrionaceae
Facultative, curved rods, oxidase positive
Describe the campylobacteriaceae
Curved microaerophilic, oxidase positive
Describe Helicobacter
curved, microaerophilic, oxidase positive, urease positive
Describe the Pseudomonadaceae
aerobes, oxidase positive
Which gram negative organisms tend to be less pathogenic Lactose positive or lactose negative
Lactose positive
What are the four types of E coli that can cause GI disorders
Enterotoxigenic (ETEC)
Enteropathogenic (EPEC)
Enterohemorrhagic (EHEC)
Enteroinvasive (EIEC)
What is the type of E coli that causes UTIs
Uropathogenic E coli
What is the type of E coli associated with sepsis and meningitis in neonates
Encapsulated E coli
What is the presentation of Enterotoxigenic E coli
Traveller's diarrhea, watery for several days. Toxin mediated infection causes nausea, vomiting, NO blood or mucus in feces. Self limiting
What type of immunity protects against Enterotoxigenic E coli
IgA
What is the pathogenesis of Enterotoxigenic E coli
Eterotoxin release causes hypersecretion of chloride ions and water due to increases in cAMP and cGMP
What are the virulence factors of Enterotoxigenic E coli
Colonization factor antigens (CFA) on pili helping to bind to small intestine. Heat labile and heat stable enterotoxins
An increase of intracellular cAMP in the small intestine epithelia caused by bacteria will cause what
Increased leaking of Na and Cl into the intestinal lumen (water follows) causing watery diarrhea
What is the reservoir of Enteropathogenic E coli
The human colon (no animals)
What is the presentation of Enteropathogenic E coli
Watery diarrhea, mostly in infants and children in developing countries; fever and vomiting may occur; self-limiting
What are the virulence factors of Enteropathogenic E coli
Bundle-Forming Pili (BFP), can cause loss of microvili, No particular toxin
What is the presentation of Enterohemorrhagic E coli (EHEC - O157:H7)
Mild to copius Bloody diarrhea; severe abdominal pain/cramps; little or no fever
If Enterohemorrhagic E coli (EHEC - O157:H7) progresses to hemorrhagic collitis, what can follow
Hemolytic uremic syndrome leading to acute renal failure
What is the pathogenesis of Enterohemorrhagic E coli (EHEC - O157:H7)
Consumption of contaminated foods, less than 100 organisms is needed
How does Enterohemorrhagic E coli (EHEC - O157:H7) cause its most severe damage
Release of shiga-toxin that destroy LARGE intestine microvilli, toxin enters blood stream causing endothelial damage and platelet aggregation leads to kidney damage
What is the presentation of Enteroinvasive E coli
Fever and scant-bloody diarrhea with pus in young children in developing countries
Where does Enteroinvasive E coli bind in the human body
Large intestine (That's why we can see blood in patients' stool)
Which two forms of E coli bind in the small intestine
ETEC, EPEC
In which form of E coli is fever common? Absent?
Common in EIEC, absent in ETEC
What is the presentation of uropathogenic E coli
UTI (more common in women); Cystitis (bladder infection with dysuria and frequent urination); Pyelonephritis (kidney infection with dysuria, fever, shaking chills, flank pain, nausea, vomiting)
An eighteen year old, sexually active, patient complains of pain on frequent urination, flank pain, nausea, and fever. What is your diagnosis
uropathogenic E coli
Is uropathogenic E coli motile or non-motile
Motile, helps in travelling up urinary tract
What is the presentation of Extraintestinal (systemic) E coli
Neonatal meningitis (can also be caused by Group B strep and Listeria), nosocomial (urinary catheter) infections in compromised
What organisms can cause neonatal meningitis
Extraintestinal E coli, Group B strep, Listeria
What are some complications associated with Extraintestinal E coli infections
Sepsis, endotoxic shock, pneumonia
What organism causes a "true" dysentery type diarrhea? Describe this diarrhea
Shigella; scant, bloody, mucus/pus, leukocyets in stool
What is the presentation of Shigella
Initial watery diarrhea, abdominal cramps, fever, dysentery diarrhea follows
Where/what does Shigella bind and what happens to them, what are the immediate results
Selectively binds M cells in LARGE intestine, taken in and escapes endosome to enter cytoplasm -> inflammation and cell death
What can Shigella dysenteriae cause
Hemolytic-uremic syndrome leading to renal failure similar to EHEC
Does a shigella infection resolve itself?
In most cases of healthy individuals, yes
Both Shigella and Salmonella are lactose negative, how can they be told apart in the lab
Shigella is H2S negative
How often does Shigella enter the blood stream
rarely
What is the main reservoir of Shigella? Salmonella?
Shigella-humans; Salmonella-animals
Which requires more organisms to cause infection Shigella or Salmonella
Salmonella
Which can more easily invade the bloodstream, shigella or salmonella
Salmonella
Where does salmonella bind during initial infection
BOTH small and large intestines
In a patient you suspect of having Salmonella, what samples should you send to the lab
BOTH stool and blood samples
Is salmonella motile or non-motile
Motile
What is the reservoir of Salmonella typhi
Chronic human carriers
Why is Salmonella typhi so dangerous
It can easily get into the bloodstream and can survive in macrophages
"Rose spots" are associated with what microbe infection
Salmonella typhi
What species is most common bacterial cause of diarrheal disease
Campylobacter jejuni
Does campylobacter have a high or low infectious dose
Low
What is the presentation of campylobacter
Watery to bloody diarrhea with fever and sever abdominal pain
What tissues does campylobacter invade
jejunum, ileum, and colon
What autoimmune reaction is campylobacter jejuni associated with
Guillain-Barre Syndrome
Describe the labs for Campylobacter
Fastidious, Gram(-) curved rod, oxidase (+)
What is the presentation of Yersinia
Bloody diarrhea, enterocolitis similar to salmonella and shigella after exposure to contaminated foods
What is the source and what is the reservoir of Vibrio
Animal source, human reservoir
Is the infectious dose of vibrio high or low
Very high
What is the presentation of Vibrio
"Rice Water" stools, watery and cloudy, copious amounts
Where does Vibrio adhere
Small intestines
What toxin does Vibrio secrete
Cholera toxin
Other than Vibrio cholera, what are the other two Vibrio species to be aware of
V parahemolyticus (dysenteric diarrhea), V vulnificus (septicemia risk)
What are the lab diagnosis features of Vibrio
Gram(-) curved rod, oxidase (+), very motile
What organisms cause copious watery stool with no blood or pus, no tissue invasion, and is in the small intestine
Vibrio cholerae, ETEC
What organisms cause scant bloody stool with mucus and pus, has tissue invasion, and is in the large intestine
Shigella, Entamoeba histolytica
What organisms cause copious, thickened blood with no leukocytes, has tissue invasion and is in the large intestine
EHEC
What organisms cause copious liquid, bloody, or blood-tinged stool with pus, tissue invasion and is in the ileum and colon
Salmonella, Campylobacter jejuni, Yersinia enterocolitica
Food poisoning with an onset of 1-6 hours could be caused by
Bacilus cereus, Staphylococcus aureus
Food poisoning with an onset of 8-16 hours could be caused by
Clostridium perfringens, Bacilus cereus
Food poisoning with an onset of >16 hours could be caused by
Campylobacter jejuni, Clostridium botulinum, E coli, Shigella
What tissue does helicobacter colonize
Stomach
What enzymes does helicobacter release that help it to colonize the stomach
Mucinase, ureases (releases ammonia)
What are the laboratory diagnostic features of Helicobacter
Gram(-) curved rod, oxidase(+), urease (+), motility(+), microaerophilic, urea breath test, endoscopy/biopsy culture
What is the presentation of Klebsiella pneumoniae
Bronchopneumonia, lung abscess, UTI, wound infections
What is a notable virulence factor of Klebsiella pneumoniae
Luxurious complex capsular polysaccharide
A patient with respiratory Klebsiella pneumoniae infection will have sputum with what appearance
Like currant jelly
What are the laboratory diagnostic features of Klebsiella pneumoniae
Short plump Gram(-) rod, lactose (+), Urease (+), non-motile
What bacteria has a "swarming motility"
Proteus
What bacteria secrete urease
Proteus, klebsiella, helicobacter
What are some characteristics of Haemophilus influenzae
Gram negative pleomorphic rods with fastidious growth requirements
Are Haemophilus influenzae capsulated or unencapsulated
Could be either depending on type
Do Haemophilus influenzae require aerobic or anaerobic environments to grow
Could be either (or both)
What growth factors might Haemophilus influenzae require that are found in blood
X factor - protoporphyrin IX, hemin precursor
V factor - NAD or NADP
Which form of Haemophilus influenzae are normal flora of the upper respiratory tract
Unencapsulated strains
Haemophilus influenzae normally cause infections in what group of people
Children
Invasive diseases that can be caused by Haemophilus influenzae include what
Meningitis, Epiglottitis, Cellulitis, Osteomyelitis, Sepsis, Pneumonia, Septic arthritis
Noninvasive diseases that can be caused by Haemophilus influenzae include what
Conjunctivitis, Sinusitis, Otitis media
Why will Haemophilus influenzae not grow on normal blood agar, why does it require chocolate agar as growth media
V-factor is inactivated in blood-agar and therefore is not available to H influenzae
What is the major virulence factor of Haemophilus influenzae? What is protective against the bacteria?
The capsule (PRP in type B), Ab against capsule in protective (must be specific to type of H influenzae
What is an effect that the LOS on the outer membrane of Haemophilus influenzae has on respiratory epithelium
Exerts a paralyzing effect
List the major virulence factors of Haemophilus influenzae
Capsule, LOS, IgA proteases
Describe the pathogenesis of Haemophilus influenzae type b
Infection by inhalation of infection droplets, invasion of blood stream (type b capsule is essential for invasion), replication in blood and seeding of various sites
How might neurological sequelae occur in children who recover from Haemophilus influenzae type b
Damage caused by organism itself as well by cytokine release in host response.
Why might Haemophilus influenzae infection be rare during the first three months of life
maternal antibody
What organism is the cause of whooping cough in humans
Bordetella pertussis
What is whooping cough also known as
pertussis
What two organisms can produce pertussis-like symptoms in humans
Bordetella pertussis and Bordetella parapertussis
Describe the characteristics of Bordetella pertussis
Gram negative rod, non-motile, only grows on special media containing starch or charcoal to remove fatty acids
If you want laboratory confirmation that your patient has whooping cough, what must you indicate to the lab running samples
That you are looking for Bordetella pertussis so that they can culture the sample on special media
Is Bordetella pertussis invasive of body tissues
No?
What is the major virulence factor of Bordetella pertussis? Describe it
Pertussis toxin, classic A-B toxin (A portion is toxic and enters cell, B is receptor)
What does the Pertussis Toxin do upon entering the cell
A toxin splits NAD into nicotinamide and ADP-ribose which inactivates G1 protein controlling adenylate cyclase activity leading to build up of cAMP causing the cell to secrete massive amounts of fluids and electrolytes
What are the three stages of pertussis
Catarrhal phase - Runny nose, malaise, fever
Paroxysmal phase - cough, vomiting, leukocytosis
Convalescence
What stage of pertussis is the most contagious
Catarrhal
What are the diagnostic tools in identifying a patient with pertussis in the catarrhal (early) stage
DFA (direct fluorescent antibody)
PCR
Serology (for IgG and IgA against B pertussis antigens)
Describe the characteristics of Legionella
Fastidious Gram-negative aerobic bacilli
Most documented infections in the US by Legionella pneumophila have been
serogroup 1 strains
How is legionnaires disease (caused by legionella) acquired
Inhalation of aerosolized water contaminated with Legionella pneumophila
What organism is responsible for the short-onset disease known as Pontiac fever
Legionella
What people is Legionella most likely to infect
The elderly and immunocompromised
What are the expected symptoms of Legionnaires disease
Varies from mild to severe pneumonia characterized by fever, cough and proressive respiratory distress
An elderly patient presents with moderate pneumonia, fever, cough, and increasing respiratory distress. His wife reports that he had recently used their old jacuzzi. What might he have?
Legionnaires disease
What are the expected symptoms of Pontiac fever
No pneumonia, occurs in epidemic characterized by self-limited influenza-like manifestations
What are some diagnostic tests for a patient infected with Legionella
Sputum culture, DFA sputum stain, Urinary antigen, serum antibody
What are the three main non-invasive gram-negative bacteria that Dr. S discussed
Vibrio cholera, ETEC, EPEC
Where is Pseudomonas aeruginosa found (in general)
Everywhere, it is ubiquitous, "biofilm"
What are the major characteristics of Pseudomonas aeruginosa
Obligate aerobe, oxidase (+), motile, encapsulated by glycocalyx/slimelayer, minimal nutritional requirements, highly resistant to antibiotics, pigmented
Suppose you found, in the lab, an obligate aerobe that is oxidase (+), motile, and forms slimy blue/green colonies, what might you have?
Pseudomonas aeruginosa
What is the only lactose negative organism that is oxidase positive?
Pseudomonas aeruginosa
What is a common mode of transmission of Pseudomonas in a hospital setting
Respiratory therapy equipment
How might Pseudomonas be transmitted
On or in just about anything that is wet
What are the virulence factors of Pseudomonas
Pili & flagella for adherence/colonization
Glycocalyx
Proteolytic Enzymes
*Exotoxin A - like C diptheriae
Endotoxin-LPS
CF patients are at increased risk for infection by what type of Gram negative bacteria?
Pseudomonas aeruginosa
What are likely sources or risk factors for development of a localized pseudomonas infection
Wounds (esp burns)
Whirlpools & tubs
What are the complications of a systemic Pseudomonas infection
Just about everything you could imagine of systemic bacterial infections
A patient presents with an infected burn wound coated in a white-ish green pus and smells of a fruity odor. What organism might be responsible for this infection
Pseudomonas aeruginosa
Is there a vaccine for Pseudomonas
No
What are the characteristics of Brucella
Aerobic facultative intracellular parasite, small poorly staining, very hardy, prolonged incubation to culture
What is the major virulence factor of Brucella
LPS
How is Brucella transmitted
Contact with or consumption of infected fluids from animals (esp. cows)
Does Brucella have a high or low infective dose
Low
What is it important to know about Brucella pathogenesis
It can easily penetrate into the blood
A dairy farm worker presents with chills, weight loss, depression, and pain in his joints. He also has a fever that rises during the day and decreases at night. What might he be infected with
Brucella
What organism causes tularemia (rabbit fever)
Francisella tularensis
Describe the characteristics of Francisella tularensis
Gram-neg., small pleomorphic coccobacilli, lipid-rich capsule, strict aerobe, has endotoxin, no exotoxin, Facultative intracellular parasite)
What is the mode of transmission for Francisella tularensis to humans
Arthropod vectors (and deerfly) or animal contact/abrasions
Is the infectious dose of Francisella tularensis high or low
Very low
What is the pathogenesis of Francisella tularensis
Begins cutaneously as erythematous papule, ulcerates, persists, then organism spreads to RES system via lymph
What are the symptoms of Tularemia
Acute onset, flu-like chills, fever, headache, malaise, fatigue, anorexia and papules on skin as well as lymphadenopathy
Is there a vaccine for tularemia
Experimental live vaccine
How is Tularemia diagnosed
Clinical history (exposure), lab growth, Serodiagnosis is best (IgG titers)
What organism causes "The Black Plague"
Yersinia pestis
What are the characteristics of Yersinia pestis
Gram-neg. rod, bipolar staining, oxidase neg., LPS capsule, facultative intracellular
What are the major virulence factors of Yersinia pestis
LPS, capsule, many Yersinia Outer Proteins that inhibit effectiveness of immune response
What is the infectious dose of Yersinia pestis
Extremely low (1-10 orgs)
If Yersinia pestsis loses its capsule, can it still cause disease?
No
What is the mode of transmission of Yersinia pestis
Fleas transmitting bacteria from infected animals (squirrels and rats, etc)
A patient presents with an enlarged lymph node, on physical exam you notice scratches on their hand. You ask if they have a cat, they say yes. What might the cause of the lymphadenopathy be
Bartonella
A patient presents with a wound from a dog bite that is developing cellulitis around it. Should you suture the wound? Why/Why not?
No, Pasteurella grows better when wound is sutured
What are the general characteristics of Spirochetes
Long, slender, motile, flexible, gram(-) bacilli (corkskrew)
What are the three spirochetes that we need to know
T pallidum, Borrelia, Leptospira
What organism causes syphilis
T pallidum
What organism causes lyme disease
Borrelia
How is T pallidum cultured in vitro
It can't be, only grown in rabbit testes
What is the pathogenesis of T. pallidum
Transmission either sexual contact or transplacentally, enters via break in skin or penetration of mucous membranes, no exotoxin or endotoxin, **Injury may be due to prolonged DTH response**
Primary syphilis presents with what approximately how long after innoculation
3 weeks (at least), chancre on site of innoculation
Secondary syphilis presents with what
Rash that starts on plams and soles of feet, can also have systemic appearances (hepatitis, meningitis)
Tertiary syphilis presents with what
Gumma on skin (granulomatous lesion), degeneration of nervous system and cardiovascular problems
What are some added risks of congenital syphilis
Fetal death, spontaneous abortion, stillbirth
How is the organism identified in a patient you suspect of having syphilis
Can be visualized under darkfield microscopy from primary and secondary lesions (sometimes), Usually diagnosed by serological tests
Which is larger T pallidum or Borrelia burgdorferi
Borrelia burgdorferi
What are some characteristics of Borrelia burgdorferi
Large spirochete, flagellated, Do not make endo or exotoxins
What is the most common vector-borne infection in the United States
Lyme disease
What is the pathogenesis of Borrelia burgdorferi (Lyme disease)
Vector-born infection transmitted by deer/rodent tick
What are some clinical findings associated with Borrelia burgdorferi
Tick bite, Erythema migrans (potentially bulls-eye shaped rash) within 1-4 wks, joint pain and neruological complications (wks to mos), chronic arthritis and CNS disease (mos to yrs)
What are the ways of identifying the organism in labs looking for Borrelia burgdorferi
Can be cultured, but slow and difficult, serological tests, PCR
What organisms that we have discussed present with relapsing fever
Bartonella (~5 days), Borrelia recurrentis (~4-10 days)
How is Leptospira interrogans contracted
transmitted by food or water contaminated with animal urine or feces (swimming in contaminated water)
How might one identify an atypical bacterial respiratory infection caused by mycoplasma or chlamydia instead of staph or strep
Gradual onset of symptoms, non-productive and scant sputum, no bacteria on sputum smear, patchy pneumonia (not lobar)
What bacteria have no cell wall
Mycoplasma
What are some characteristics of Mycoplasma
No cell wall, lipid bilayer contains sterols, fastidious (require cholesterol) "fried egg" colony appearance
Would penicillin be effective against Mycoplasma? Why?
No, no cell wall for penicillin to act on
What is the transmission of Mycoplasma pneumoniae
Inhalation of infected respiratory droplets
How does mycoplasma pneumoniae cause damage
Binds and inhibits ciliary action so mucosa desquamates
How is Mycoplasma pneumoniae identified in lab tests
Seroligically (cultures too slow growing)
What are two genital Mycoplasma
Ureaplasma and M hominis
What are the organisms that you would expect to produce Urease
Helicobacter, Proteus, Klebsiella, Ureaplasma
What organism is an obligate intracellular organism
Chlamydiae
What are the characteristics of Chlamydiae
Obligate intracellular, dual-lipid bilayer, no peptidoglycan (still has LPS)
What are the two forms that Chalmydiae are found in, in the body
Reticulate body and elementary body (spore like)
What organism is responsible for the most common STD
Chalmydia trachomatis
Is Chlamydia trachomatis invasive?
Rarely
What are some risks aside from those directly related to the infection of a Chlamydia trachomatis infection
PID, sterility, atopic pregnancy
How will Chlamydia trachomatis appear on a gram-stain
it won't
What does Chlamydophila pneumoniae cause
Atypical pneumonia
What does Chlamydophila psittaci cause and how is it transmitted
Acquired from dried feces of parrot family birds, Atypical pneumonia
Rickettsiae mainly cause problems where
within the vasculature
The rickettsiae are normally transmitted by what
Arthropod vectors
A patient presents with rash, fever, and headache, what should you be considering at this point?
Rickettsia and other tick-borne infections
What is a major virulence factor for Rickettsia
Phospholipase A, causes damage and escape from phagolysosomes
What organisms mobilize actin
Listeria, Shigella, Rickettsia
The vasculatory effects of Rickettsia will/may lead to what
Rash, high fever, malaise, headache, vascular collapse (tissue anoxia, drop in BP, shock)
Rocky Mountain Spotted Fever is caused by what organism
Rickettsia rickettsii
The rash associated with Rocky mountain Spotted Fever could be confused for what other disease
Syphillis
Coxiella burnetii (Q fever) is transmitted by what
NOT by arthropods (exception among rickettsia) transmitted by inhalation or abrasion
Coxiella burnetii causes what?
Atypical pneumonia