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54 Cards in this Set

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Cellular respiration equation

C6H12O6 + 6O2 --> 6CO2 + 6H2O + 3 ATP

What is cellular respiration?

The release of energy through oxidation of glucose

What does oxidation involve?

The removal of electrons (usually H in bio) and the transfer of energy

4 stages of cellular respiration

1.Glycolysis


2. Pyruvate Oxidation


3. Kerbs cycle


4. Electron transport & oxidative phosphorylation

Redox reactions

Oil Rig


Oxygen is lost of electrons


Reduction is gain of electrons


-> transfer of energy

Phosphorylation

Addition of phosphate

Dephosphorylation

Remove a phosphate

Dephosphorylation

Remove a phosphate

Isomerization

Rearrangement reaction

Dephosphorylation

Remove a phosphate

Isomerization

Rearrangement reaction

Decarboxylation

Remove a carboxyl —> CO2

What is ATP synthesis and what are the 2 types?

Phosphorylation of ADP


1. Substrate level phosphorylation —> uses an enzyme to form ATP directly


2. Oxidative phosphorylation—> forms ATP with proton pump w/ facilitated diffusion

ATP hydrolysis

ATP + H2O -> ADP + P(energized)


-bond between 2nd & 3rd phosphate is a high energy bond


-releases energy when broken

ATP + Energy coupling

- During hydrolysis of ATP, often the 3rd phosphate will attach to another organic molecule (phosphorylation)


- results in a transfer of free energy & allows the cell to perform an endergonic reaction

Exergonic and Endergonic reactions

Exergonic -> energy is released


Endergonic -> energy is absorbed

2 ways living things get energy

- directly: photosynthesis (sunlight)


-indirectly: Cellular respiration (consuming substance)

Why is glucose not used directly as an energy source for cells?

Too much energy, must be broken down to ATP

Significance of phosphorylation?

-Energizes molecules


- can be used to make a product

Glycolysis location

Cytoplasm

Is glycolysis anaerobic or aerobic ?

-anaerobic because it doesn’t use O2

Glycolysis reactants and products

Reactants Products


- 1 glucose - 2 pyruvate


- 2 ATP - 2 ADP


- 2 NAD+ - 2 NADH


-4 ADP - 4 ATP

Gross and net of ATP in glycolysis

-Gross 4 ATP


-Net 2 ATP

Pyruvate oxidation location

- location : mitochondrial matrix


- pyruvate enters mitochondra via transport protein

Pyruvate oxidation

1. A carboxyl is removed as CO2 (decarboxylation)


2. Remaining 2 carbon sugar is oxidized by NAD+ (reduced to NADH)


3. Co enzyme A is added to 2 C sugar to form acetyl-CoA

Pyruvate oxidation location

- location : mitochondrial matrix


- pyruvate enters mitochondra via transport protein

Pyruvate oxidation reactants and products

Reactants Products


- 2 pyruvate - 2 CO2


- 2 CoA - 2 acetyl- CoA


- 2 NAD+ - 2 NADH

Krebs cycle location

Mitochondrial Matrix

Krebs cycle reactants and products

Reactants Products


- 2 Acetyl-CoA - 4 CO2


-2 Oxaloacetate - 2 Oxaloacetate


- 6 NAD+ - 6 NADH


- 2 FAD - 2 FADH


- 2 ADP - 2 ATP

Krebs cycle reactants and products

Reactants Products


- 2 Acetyl-CoA - 4 CO2


-2 Oxaloacetate - 2 Oxaloacetate


- 6 NAD+ - 6 NADH


- 2 FAD - 2 FADH


- 2 ADP - 2 ATP

Where do the products go after Krebs cycle?

-NADH and FADH2 go through electron transport system


- 4 CO2 is a waste product


- 2 Oxaloacetate remains in the Krebs cycle


- 2 ATP is used as energy

When does fermentation occur and what are the 2 types?

- occurs when there’s no O2


- Alcoholic Fermentation and Lactic Acid Fermentation

What is the purpose of fermentation

- regenerate the supply of NAD+


- the regeneration of NAD+ allows glycolysis to continue so more ATP can be produced

Alcohol fermentation reactants and products

Reactants Products


- 2 pyruvate - 2 ethanol


- 2 NADH. - 2 NAD+


—————— - 2 CO2


Lactic Acid fermentation reactants and products

Reactants Products


- 2 pyruvate - 2 Lactate


- 2 NADH - 2 NAD+

Electron transport chain & oxidation phosphorylation

- NADH + FADH2 carry these electrons to the inner membrane of the mitochondria


- electrons are passed through a series of redox reactions between proteins embedded in the inner membrane


- energy is released to drive proton pump (H+ moves from matrix to inner membrane space)


- Final electron acceptor is O2 which makes 2 H2O


- As H+ re-enters the matrix through ATP synthase, energy is released and used to make ATP

NADH Vs FADH2

- NADH drives 3 proton pumps as it enters earlier than FADH


- Each NADH produces 3 ATP


- Each FADH2 produces 2 ATP

Total ATP production

-gylcolysis : 2 ATP


2 NADH x 3 —>6 ATP


- Pyruvate oxidation:


2 NADH x 3 —> 6 ATP


- Krebs : 2 ATP


6 NADH x 3 —>18 ATP


2 FADH2 x 2 —> 4 ATP


Total: 38 ATP

Deamination

- removal of an amino group from an amino acid or other compound

Transamination

- the transfer of an amino group from one molecule to another

Lipid oxidation

- glycerol + 3 fatty acids


- B- oxidation removes 2 C at a time from carboxyl end of fatty acid


-Called a helix because the product isn’t the same but the series of reactions are

Protein Oxidation

-has an amino side and carboxyl


- usually produces a sugar from krebs


- deamination and transanimation

Protein Oxidation

- Deamination


-usually will produce an immediate sugar from krebs


- Transanimation


- produce another amino acid & a sugar

Protein Oxidation

Deamination


-usually will produce an immediate sugar from krebs


Transanimation


- produce another amino acid & a sugar

Photons

- bundle of light

What must happen to permit an electron to move from one energy level to a higher energy level?

- electron absorbs a photon

What are pigments?

- Molecules bound to proteins that don’t move


- they are used to capture light energy


- what ever light is not absorbed we see

What is the characteristics about the structure of carotenoid pigments and their function

- series of alternating double and single bonds in the backbone of the pigment


- function is accessory pigments

Chlorophyll a and b structure

Chlorophyll a: CH3


Chlorophyll b: CHO

Why is photon capture more efficient with chlorophyll than with carotenoid pigment?

-because chlorophyll can transfer energy to the primary electron acceptor directly

Photosynthesis equation

CO2 + H2O —> C6H12O6 + O2

Light independent reactions

- photons strike a photosynthetic membrane to produce ATP + NADH


- Location : Thylakoid membrane

Photosystem

Photosystem: cluster of proteins + pigments


2 parts:


- antenna complex : pigment molecules


- reaction centre : contains chlorophyll a

Photosystem II

-splitting of H2O into electrons


- antenna complex absorbs photon of light and transfers to P680, resulting in energized P680