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77 Cards in this Set

  • Front
  • Back
what is the first law of thermodynamics
conservation of energy
what is the second law of thermodynamics
entropy
change in G =
Change in H - TChangeS
ChangeH =
ChangeE - PChangeV
if you know a ChangeG are you talking about exergonic or exothermic
exergonic
if you know ChangeH are you talking about exergonic or exothermic
thermic
the value of the changeG depends on ...
concentrations of reactants and products which can vary in the human body
ChangeGo =
-RTlnKeq
ChangeG in terms of Go =
ChangeGo + RTlnK
what is the difference between K and Keq
Keq is at equilibrium. K uses actual concentrations
Is the intrinsic properties of the reactants and products ChangeGo RTlnK or ChangeG
ChangeGo
is the concentration of reactants and products ChangeG ChangeGo or RTlnK
RTlnK
how does the changeG for a reaction burning sugar in a furnace compare to changeG when sugar is broken down in the body
they are the SAME! ChangeG is ChangeG the pathway does not matter
do catalysts affect changeG
NO only the rate. pathway does not matter.
does the enzyme have a kinetic, thermodynamic role or both in the cell
ONLY kinetic
what does kinetic deal with
determining rate
what does thermodynamic deal with
determining favorability
definition. the ability to distinguish between stereoisomers
stereospecificity
what do proteases do
protein cleaving enzymes
what are four ways to regulate metabolic pathways
covalent modification
proteolytic cleavage like zymogens
association with other polypeps like constitutive activity
allosteric regulation
what shape would a graph of cooperative binding have and why
sigmoidal because affinity is enhanced as more substrate binds
is cooperative binding in the active site or allosteric site
active site
what converts glucose to G6P
HK
what convert F6P to F1,6BP
phosphofructokinase
what is the committed step of glycolysis
F1,6BP to G3P
what converts PEP to pyruvate
pyruvate kinase
what is the PDC
pyruvate dehydrogenase complex and it makes pyruvate into acetyl coA and NADH
definition. various organic and inorganic substances necessary to the function of an enzyme but hwich never actually interact with the enzyme
co factor
what does OAA stand for and where woudl you find it
oxaloacetate. found in teh entry of acetyl coA to the Krebs cycle
what are the four carriers in oxidative phosphorylation
NADH dehydrognease
cytochrome C reductase
cytochrome C oxidase
how many ATP and NADH made in glycolysis
4
2
how many NADH made in PDC
2
how many NADH FADH2 and GTP made in krebs
6
2
2
how many ATP per NADH FADH2 GTP
2.5
1.5
1
how many ATP total in euk? prok?
30
32
nucleotides in teh DNA are covalently linked by what kind of bonds
phosphodiester bonds
is the 5 or 3 always written first
five is always written first
what is the central dogma of biology
DNA to RNA to protein
what are the stop codons
UAG
UGA
UAA
is the genetic code ambiguous
no one codon only codes for one aa
what is a transition
substitution fo pyr for another pyr or purine for another purine
what is transversion
substituting a pyr for a pur or vice versea
polymerization occurs in the __ to __ direction
5 to 3
would you expect helicase to use the E of ATP hydrolysis to do its job
yes. helicase needs to break lots of H bonds which means energy is needed
what do DNA pol I and III do
III has polymerase activity with 3 to 5 exonuclease activity
I does more editing work like removign the primer and replacing it with DNA along with 5 to 3 exonuclease activity
why is Thymine a good target for cancer treatment
it is only found in DNA so only DNA replication is affected not RNA
what does RNA pol I II and III do
transcribe rRNA
trasncribe mRNA
transcribe tRNA
do exons or introns get expressed
exons
introns are spliced out
is the TATA box in prok or euk
euk
what is needed to activate tRNA
tRNA syntehtase enzyme and 2ATPs that are cut for their phosphates creating AMP
does fMET or MET belong to euk
MET is euk
are the nascent polypep chains emerging from a polyribosome i a euk all the same?
in euk yes because mRNA is monocistronic
an obligate intracellular parasite most likely refers to a _____
virus
why might a bacteriophage inject its DNA while animal viruses do not
phage must puncture the bacti cell wall while animal viruses can be intertnalized whole into animal cells
do +RNA viruses encode or carry RNA dependent RNA pol
encode
do -RNA viruses carry, encode, or both for RNA dep RNA pol
both
what does reverse transcriptase do
makes DNA from RNA
do animals have D or L amino acids? bacteria?
animal L aa
Bacti D aa
what is the difference between endo and exotoxins
endo are found in the outer membrane of GN bacti and aren't inherently poisonous. Exotoxins are very toxic secreted by both GP and GN
what is an auxotroph
can't syntehsize a molecule it needs to live and therefore can't grow on minimal media
what are methods of genetic exchange between bacteria
conjugation
transduction
transformation
does conjugation go from F+ to F- or vice versa
yes + to -
all fungi possess a rigid cell wall composed of ____
chitin
what is the difference between a saprophyte and a parasite
parasits fee of living organisms and saprophytes feed off dead plants and animals
are most fungi olbigate aerobes or anaerobes
aerobes
why do fungi need hyphae
because they absorb nutrients outside of the fungal cell
how do fungi repreduce
asexual spore formation or budding or fragmentation
are fungal adults haploid or diploid
haploid
is passive transport thermodynamically favorable
yes this just means that it is spontaneous
what is the difference between primary active transport and secondary active transport
ATP couples primary
secon dis coupled but not directly to ATP hydrolysis
how many Na+ K+ and where to with teh na/k atpase pump
three na out
two k in
makes teh inside of the clel negative
what are some types of endocytsosi
phagocytosis
pinocytosis
and receptor mediated endocytosis
what is the key molecule in recepetor mediated endocytosis
clathrin
what is known oas the universal hunger signal
cAMP
epithelial cells inthe skin are held together by _________
desmosomes
are sister chromatids identical? homologous chromosomes?
YES
NO
Homologous chromosomes are very similar but are NOT identical
discuss briefly what is going on in M phase
prophase gathering
metaphase line up
anaphase separate
telophase