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77 Cards in this Set
- Front
- Back
what is the first law of thermodynamics
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conservation of energy
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what is the second law of thermodynamics
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entropy
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change in G =
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Change in H - TChangeS
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ChangeH =
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ChangeE - PChangeV
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if you know a ChangeG are you talking about exergonic or exothermic
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exergonic
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if you know ChangeH are you talking about exergonic or exothermic
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thermic
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the value of the changeG depends on ...
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concentrations of reactants and products which can vary in the human body
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ChangeGo =
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-RTlnKeq
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ChangeG in terms of Go =
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ChangeGo + RTlnK
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what is the difference between K and Keq
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Keq is at equilibrium. K uses actual concentrations
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Is the intrinsic properties of the reactants and products ChangeGo RTlnK or ChangeG
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ChangeGo
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is the concentration of reactants and products ChangeG ChangeGo or RTlnK
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RTlnK
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how does the changeG for a reaction burning sugar in a furnace compare to changeG when sugar is broken down in the body
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they are the SAME! ChangeG is ChangeG the pathway does not matter
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do catalysts affect changeG
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NO only the rate. pathway does not matter.
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does the enzyme have a kinetic, thermodynamic role or both in the cell
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ONLY kinetic
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what does kinetic deal with
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determining rate
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what does thermodynamic deal with
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determining favorability
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definition. the ability to distinguish between stereoisomers
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stereospecificity
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what do proteases do
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protein cleaving enzymes
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what are four ways to regulate metabolic pathways
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covalent modification
proteolytic cleavage like zymogens association with other polypeps like constitutive activity allosteric regulation |
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what shape would a graph of cooperative binding have and why
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sigmoidal because affinity is enhanced as more substrate binds
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is cooperative binding in the active site or allosteric site
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active site
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what converts glucose to G6P
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HK
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what convert F6P to F1,6BP
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phosphofructokinase
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what is the committed step of glycolysis
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F1,6BP to G3P
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what converts PEP to pyruvate
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pyruvate kinase
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what is the PDC
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pyruvate dehydrogenase complex and it makes pyruvate into acetyl coA and NADH
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definition. various organic and inorganic substances necessary to the function of an enzyme but hwich never actually interact with the enzyme
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co factor
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what does OAA stand for and where woudl you find it
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oxaloacetate. found in teh entry of acetyl coA to the Krebs cycle
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what are the four carriers in oxidative phosphorylation
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NADH dehydrognease
cytochrome C reductase cytochrome C oxidase |
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how many ATP and NADH made in glycolysis
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4
2 |
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how many NADH made in PDC
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2
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how many NADH FADH2 and GTP made in krebs
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6
2 2 |
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how many ATP per NADH FADH2 GTP
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2.5
1.5 1 |
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how many ATP total in euk? prok?
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30
32 |
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nucleotides in teh DNA are covalently linked by what kind of bonds
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phosphodiester bonds
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is the 5 or 3 always written first
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five is always written first
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what is the central dogma of biology
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DNA to RNA to protein
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what are the stop codons
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UAG
UGA UAA |
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is the genetic code ambiguous
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no one codon only codes for one aa
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what is a transition
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substitution fo pyr for another pyr or purine for another purine
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what is transversion
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substituting a pyr for a pur or vice versea
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polymerization occurs in the __ to __ direction
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5 to 3
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would you expect helicase to use the E of ATP hydrolysis to do its job
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yes. helicase needs to break lots of H bonds which means energy is needed
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what do DNA pol I and III do
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III has polymerase activity with 3 to 5 exonuclease activity
I does more editing work like removign the primer and replacing it with DNA along with 5 to 3 exonuclease activity |
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why is Thymine a good target for cancer treatment
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it is only found in DNA so only DNA replication is affected not RNA
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what does RNA pol I II and III do
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transcribe rRNA
trasncribe mRNA transcribe tRNA |
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do exons or introns get expressed
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exons
introns are spliced out |
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is the TATA box in prok or euk
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euk
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what is needed to activate tRNA
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tRNA syntehtase enzyme and 2ATPs that are cut for their phosphates creating AMP
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does fMET or MET belong to euk
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MET is euk
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are the nascent polypep chains emerging from a polyribosome i a euk all the same?
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in euk yes because mRNA is monocistronic
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an obligate intracellular parasite most likely refers to a _____
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virus
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why might a bacteriophage inject its DNA while animal viruses do not
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phage must puncture the bacti cell wall while animal viruses can be intertnalized whole into animal cells
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do +RNA viruses encode or carry RNA dependent RNA pol
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encode
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do -RNA viruses carry, encode, or both for RNA dep RNA pol
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both
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what does reverse transcriptase do
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makes DNA from RNA
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do animals have D or L amino acids? bacteria?
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animal L aa
Bacti D aa |
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what is the difference between endo and exotoxins
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endo are found in the outer membrane of GN bacti and aren't inherently poisonous. Exotoxins are very toxic secreted by both GP and GN
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what is an auxotroph
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can't syntehsize a molecule it needs to live and therefore can't grow on minimal media
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what are methods of genetic exchange between bacteria
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conjugation
transduction transformation |
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does conjugation go from F+ to F- or vice versa
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yes + to -
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all fungi possess a rigid cell wall composed of ____
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chitin
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what is the difference between a saprophyte and a parasite
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parasits fee of living organisms and saprophytes feed off dead plants and animals
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are most fungi olbigate aerobes or anaerobes
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aerobes
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why do fungi need hyphae
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because they absorb nutrients outside of the fungal cell
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how do fungi repreduce
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asexual spore formation or budding or fragmentation
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are fungal adults haploid or diploid
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haploid
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is passive transport thermodynamically favorable
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yes this just means that it is spontaneous
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what is the difference between primary active transport and secondary active transport
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ATP couples primary
secon dis coupled but not directly to ATP hydrolysis |
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how many Na+ K+ and where to with teh na/k atpase pump
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three na out
two k in makes teh inside of the clel negative |
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what are some types of endocytsosi
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phagocytosis
pinocytosis and receptor mediated endocytosis |
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what is the key molecule in recepetor mediated endocytosis
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clathrin
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what is known oas the universal hunger signal
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cAMP
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epithelial cells inthe skin are held together by _________
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desmosomes
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are sister chromatids identical? homologous chromosomes?
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YES
NO Homologous chromosomes are very similar but are NOT identical |
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discuss briefly what is going on in M phase
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prophase gathering
metaphase line up anaphase separate telophase |