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7 Cards in this Set
- Front
- Back
Precursor ions |
The ions with intact mass of the analyte |
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Fragment ions |
Ions generated from fragmentation of the precursor ions. |
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Ion suppression |
Suppression of ionisation of low abundance analytes by high abundance analytes in the ion source. Seen in soft ionisation techniques. |
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Metabolomics |
Metabolite extraction Key: rapid enzyme sequencing Chromatography Key: separation GC: volatility HILIC: Polarity RP: Hydrophobicity Mass Spectrometry Key: sensitivity Specificity TOF, Orbitrap: mass resolution Triple quad: fragmentation Data analysis Key: metabolite identification Challenges Metabolite misidentification: fragments mimicking real metabolites Identifying unknowns: Need MS/MS or NMR |
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Masses in mass spectrometry |
Avg mass Exact mass Mono isotopic mass Accurate mass |
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Basic steps in metabolomics |
Quenching: to stop enzyme activity and interconversion between metabolites. Extraction: extraction of metabolites into solvent. Analysis: Mass spectrometry, NMR, Enzyme assays |
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Sangers reagent |
Fluorodinitrobenzene FDNM |