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32 Cards in this Set

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Organic Chemistry

Any carbon containing compound CHON Elements

Biochemistry

(Smaller Section of O Chem), Chemistry of living system, most important compounds are CHON Elements which have similar features and are relatively small.

What determines the chemical properties of an element?

How orbitals are filled and what their valence number is.

Valence

The number of electrons/ Bonds an atom can make.

Polar Covalent Bonds

A bond with electrons that are not shared equally.

Non-Polar Covalent BOnd

A bond where the electrons are shared equally.

Electronegativity

The polar attraction that CHON elements give off due to their large positive nucleus that has the ability to attract its own electrons and other electrons

What defines a bond strength?

The amount of energy it takes to break them apart. Bond energies are mesasured in cal or kcal

Calorie

Amount of energy required to raise the temperature of 1g of water 1⁰C (Cal = kcal)

What is the relationship between bond strength and molecular weight?

There is an inverse relationship between bond strength and molecular weight of elements involved in a bond. The heavier the molecule indeed to carbon the weaker the bond.

What is the relationship between wavelength and energy?

There is an inverse relationship between wavelength and energy. The higher the energy the smaller the wavelength required to break a bond.

Sterioisomers

Two atoms with the same molecular components but different spatial configurations for the same bonded atoms

Properties of Water

- Polarity


- Cohesion (Surface Tension, Boiling Point)


- Adhesion


- High Specific Heat Capacity


- Heat of vaporization (Coolant)


- Water has a high temperature stabilizing capacity

Hydrophilic

Water Loving

Hydrophobic

Water fearing, non polar, fat or lipid

What characteristics should a selectively permeable membrane have.

- Impermeable to much of the cell contents.


- Not completely impermeable


- Insoluble in water


- Permeable to water.

What does the cellular membrane consist of of?

Phospholipids, glycolipids, and membrane proteins.

What are the types of sterols in Animals & Plants

Cholesterol in Animals


Phytosterols in Plants

Amphipathic

Have both hydrophobic and hydrophilic regions

Phospholipid Structure

- A polar Head: Negatively charged phosphate group linked to a positively charger group.


- Two nonpolar hydrocarbon tails.

What are the 4 macromolecules?

- Proteins


- Nucleic Acids


- Polysaccharides


- Lipids

Macromolecule

Any very large organic molecule, usually made up of smaller molecules (monomers) joined together into a polymer. The main biological macromolecules are proteins nucleus acids & polysaccharides.

Macromolecule

Any very large organic molecule, usually made up of smaller molecules (monomers) joined together into a polymer. The main biological macromolecules are proteins nucleus acids & polysaccharides.

Steps to Producing Macromolecules

- Monomer activation


- Monomer Condesnation


- Polymerization

The Principle of self-assembly states

Information needed to specify the folding of macromolecules and their interactions to form complex structures is inherent in the polyerms themselves

Spontaneous Refolding of Ribonuclease following desaturation.

- Denaturation


- Renaturation

Denaturation

First, the folded polypeptide was exposed to denaturing condtions (heating) that disrupted noncovalent interactions between its amino acid $ groups, resulting in a ribonuclease molecule with no fixed shape and no enzymatic activity.

Renaturation

Renaturing conditions (cooling) allowed renewed interactions between the amino acid R groups. The polypeptide returned spontaneously to its native conformation, regaining enzymatic activity.

Chaperones

Assist with the assembly process of proteins, assisted self assembly

What factors aid in macromolecules assembly?

Non-covalent bonds and interactions play important roles in macromolecule assembly.


- H Bonds, Ionic BOnds, Van see Waals interaction, Hydrophobic interactions.

What factors aid in macromolecules assembly?

Non-covalent bonds and interactions play important roles in macromolecule assembly.


- H Bonds, Ionic BOnds, Van see Waals interaction, Hydrophobic interactions.

What are the advantages of hierarchy’s assembly?

- Chemical simplicity and efficiency


- Quality control at multiple levels.