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35 Cards in this Set

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gram positive bacteria

thick peptidoglycan layer that takes up stain


cocci- staph, strept, enterococcus


rods- bacillus, clostridium, corynebacterium

gram negative bacteria

thin peptidoglycan layer, has an outer membrane


lipopolysaccharide on the outer membrane


most are rods; only gram neg cocci are in human ds


E.coli, salmonella, capylobacter (enterics!- cytochrome oxidase negative, facultative anaerobes)

endotoxins

LPS- gram negative only!


3 parts


lipid A- causes enodtoxic shock


cores- short chain LPS


0 side chain- long chain LPS (length and variability can determine virulence)


exotoxins

proteins- both gram negative and gram positive


have specific and targeted actions- make them good candidates for vaccines


toxoid- inactivated exotoxin used in some vaccines


antitoxin- premade antibody to exotoxin that can be used in treatment


capsule

polysccharide or polypeptide surrounding a bacterial cell


on gram positive or gram negative bacteria


virulence factor! it inhibits phagocytosis- easy for the capsule to slip away from the macrophages

spores

very resistant dormant bacterial state; withstands high temp, drying, chemicals, pressure


has a peptidoglycan and cysteine rich protein layer; makes its strong, but will not take up stain!


almost all are gram positive- bacillus, clostridium

acquisition of virulence factors

random mutations


conjugation- transfer of DNA via sexual pili


transformation- bacteria pick up naked DNA from the environment


transduction- DNA from virus

biofilms

multi-layered bacterial community embedded in a polysaccharide matrix


ability to adhere to surfaces such as catheters, implants, bone, foreign body


they aren't very resistant but they are hard to treat- when abx on, they die but they can grow again when abx stops


3 consequences of the innate immune activation

1. pathogens can be engulfed and killed by tissue macrophages


2. tissue macrophages can make cytokines and chemokines to signal neutrophils, monocytes, lymphocytes


3. DCs leave the tissue and go to LN for t and b cell activation

types of dendritic cells

conventional- engulf organism, process it and activate T cells. CCR7 chemokine directs it to the LN. have MHC II and B7 expressed on the surface to activate T cells


plasmacytoid- cell population not very good at phagocytosis. produce type 1 interferon

t cell activation

1. TCR on t cell binds to MHC complex on DC


2. CD28 on t cell binds to B7 on DC


3. third step not necessary- cytokines allow differentitation

b cell activation

1. Binds native antigen


2. CD40L / CD40 on t helper cells

how do pathogen specific T and B cells find each other

B and t cells express chemokines and receptors


T cells express CCR7- localizes it to the T cell zone


B cells have simlar cytokine that allow it to localize to B cell follicle


T cells then upregulate chemokine rec that directs it to the B cell zone (b cells do the same thing when activated)


they line up on the edge of the b cell follicle and deliver signals to each other

smallest and largest viruses

smallest- DNA circovirus (18nm)


biggest- small pox (300nm)

RNA viruses

All are single stranded except for reovirus, BIRNA

DNA viruses

All are double stranded except for circovirus, parvovirus

morphology- naked virus

Genome in the middle- DNA or RNA


Surrounded by capsid (hexagon) protects the genome


Proteins on the outside- receptor binding proteins- allows the virus to bind to the host and determines host specificity

virus symmetry

icosehedral- cubic symmetry


20 faces, 12 points- most stable


helical- built like a helix


rabies, membrane on the outside


complex symmetry- poxviruses

components of fungi cells

cell wall- very different from bacterial cell walls; contains chitin, beta glucan- target of antifungal drugs like glucan synthase inhibitor


cell membrane- contains ergosterol

mechanisms of antifungals

glucan synthase inhibibtor- targets cell wall


amphotercin B- binds to ergosterol in the membrane and makes cations leak, killing the cell


azole drugs- targets the synthesis of ergosterole, doesn't kill as rapidly

mold vs. yeast

mold- filamentous fungus that forms hyphae, which can branch


yeast- single cell fungus that reproduces by budding

fungal terminology

mycelium- a mat of hyphae


conidia- reproductive unit, spores


fruiting structure- repro strucutre generally only seen in culture, it makes the conidia


arthroconidia- condidia that form as the result of fragmentation of hyphae


dermatophyte- causes ringworm


anamorph- asexual repro stage


telomorph- sexual repro stage

habitat for fungus

survive on dead or decaying material


usually don't need a host to propagate themselves


exceptions- dermatophytes need to be on host to propogate itself


candida albicans- usually only found on mucus membranes in animals

fungal morphology

hyphal- septate vs. nonseptate


septate- have dividers between the cells, non-septate are one long cell with many nuclei

aspergillus

segmented, branhcing gram stain positive


can cause respiratory problems in birds

cryptococcus

is a yeast (much larger than bactertia)- colonies can look like bacteria, first do a gram stain!


nasal or systemic disease in dogs, cats, huiman


infection from the environment, produces abundant capsule which can be observed with india ink stain (looks like a blue haze)


examples of dimorphic fungi

coccidioides immitis/posadasii


valley fever- causes systemic disease


factors predisposing to fungal infection

immuno-compromise- diabetes mellitus, hyperadrenocorticism


break in host's defenses- break in skin, URI


prolonged abx use- disrupts normal bacterial flora, may influence innate immunity

Pulsed field gel electrophoresis

tells us if two samples have the same DNA, used in forensics, determining outbreaks such as e.coli in food

real time PCR

has a higher sensitivity

conventional PCR

j

sequence analysis

j

MALDI-TOF

j

morphology- enveloped virus

h

replication of viruses

er