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132 Cards in this Set

  • Front
  • Back
unique feature of eukaryotic cells
compartmentalized cytoplasm
significance of membranes in eukaryotic cells (3)
1. barrier between the cell and the external environment

2. subdivide cell into compartments

3. allow each type of organelle to maintain novel ionic and enzymatic interior environments
three things membranes are composed of
1. lipids
2. proteins
3. carbohydrates
Can membranes be visualized in a light microscope? Why or why not?
No.
1. Too thin (~7nm)
2. do not stain with H&E
Can membranes be seen in an electron microscope?
Yes, when stained with osmium tetroxide.
Membrane lipids have _________ tails and __________ heads.

This makes them _________.
uncharged, hydrophobic

polar, hydrophilic

amphipathic
Because of their amphiphatic nature, membrane lipids form a lipid bilayer _____________.
spontaneously
The key to the organization of the membrane is the presence of the hydro______ center which acts as an ___________ to membrane proteins that can move within the lipid bilayer.
phobic

anchor
The membrane is highly permeable for ____________ that cross the membrane by simple diffusion.
small, uncharged molecules
2 different classifications of membrane protein structure
integral and peripheral
integral proteins
Membrane proteins which have a hydrophobic region which is embedded into the hydrophobic core of the membrane
transmembrane proteins
integral membrane proteins that extend all the way through the membrane
peripheral proteins
not embedded within the lipid bilayer. (attach to integral proteins or hydrophilic heads of the membrane lipids)
3 functional classifications of membrane proteins
1. transport proteins
2. receptors
3. structural proteins
transport proteins
allow charged and polar molecules to enter cell and bypass impassible lipid bilayer
3 types of transport proteins
1. channel proteins
2. carrier proteins
3. pumps
channel proteins
form ores in the membrane which are either open or closed to certain molecules
carrier proteins
drag other molecules through the membrane by hiding them in cleft in the protein
pumps
use ATP energy to pump ions through the membrane
receptor proteins
bind to specific molecules in the extracellular matrix, resulting in conformational change that serves as a signal that allows the cell to adapt to its environment
structural/anchoring proteins
attach cell to its surroundings

use cytoplasmic domains to like to elements of the cytoskeleton

use extracellular domains to link to extracellular proteins
carbohydrates
oligosaccharides attached to extracellular domains of membrane proteins and lipids (glycoproteins & glycolipids)
glycocalyx
fuzzy coating visualized in electron microscope due to large amount of carbohydrates attached to proteins and lipids on the external surface of cells.
ribosome
RNA/protein particles

bring together mRNA and tRNA to synthesize a polypeptide

large and small subunit
size of a ribosome
15-25 nm
3 types of ribosomes in eukaryotic cells
1. free ribosomes
2. mitchondrial ribosomes
3. RER ribosomes
free ribosomes
majority of cellular proteins synthesized here
RER ribosomes (4)
proteins in
1. Golgi apparatus
2. lysosomes
3. secretory granules
4. plasma membrane
mitochondrial ribosomes
20% of mitochondrial proteins
(the rest synthesized on free ribosomes)
polysomes
string of ribosomes connected to single mRNA molecule
glycogen
storage form of polysaccharides
endoplasmic reticulum
series of membrane-formed anastomosin tubules and cisternae
smooth ER
no ribosomes, more tubular appearance
functions of the smooth ER (4)
1. lipid and steroid metabolism (membrane synthesis and recycling)
2. detoxification (well developed in liver cells, enzymes break down toxins)
3.glycogen metabolism
4.sarcoplasmic retculum (storage and transport of Ca 2+ in muscles, regulate contraction)
rough ER
ribosomes bound to surface, formed mostly of cisternae
roles of the RER
principle cite of synthesis of proteins destined for export out of the cell, into Golgi apparatus , lysosomes, and plasma membrane
4 targets of RER protein synthesis
1. out of the cell
2. Golgi apparatus
3. lysosomes
4. plasma membrane
structure of Golgi apparatus
series of stacked, flattened, membrane limited of POLARIZED cisternae and tubular extensions
cis Golgi
cisternae which receive vesicles from the RER
medial Golgi
middle cisternae
trans Golgi
cisternaefrom which the mature proteins are transported
function of Golgi apparatus (3)
postranslational
1. modification
2. sorting
3. packaging

of proteins
modification of proteins in the Golgi
adding/removing sugar residues, sulfate, phosphate groups
location of protein modification in the Golgi
early stages- cis Golgi
intermediate steps-medial Golgi
final modifications- trans Golgi
location of sorting and packaging of proteins in the Golgi
trans Golgi
3 main destinations of proteins from Golgi
1.secretory vesicles
2.lysosomes
3.constitutive pathway
secretory vesicles
vesicles which undergo maturartion process in which secretory proteins are retained within the vesicle.

mature secretory vesicles eventually fuse with the plasma membrane to release the secretory product into the extracellular space
lysosomes
spherical organelles of variable size produced by the Golgi, characterized by low pH and presnence of hydrolytic enzymes

digest senescent organelles and material take up from outside the cell
hydrolytic enzymes found in lysosomes
proteases, lipases, glucosidases
mannose-6-phosphate
principle sorting signal which direct proteins from the trans Golgi network to the lysosome
I-cell disease
mutation of enzymes that signal lysosome maturation causing lysosomal proteins to be secreted into the intercellular space
3 types of lysosomes
1.primary lysosomes
2.secondary lysosomes.phagosome
3.lupofuscin granules
primary lysosome
lysosomes which have not yet received substrates for digestion
secondary lysosomes
(phagosomes)
fusion of primary lysosome with target
lupofuscin granules
(residual bodies)
senescent, non-functioning lysosomes with indigestible material
constitutive pathway
small vesicles which are transported directly to the plasma membrane because they are not destined for lysosomes or secretory granules
examples of proteins in consitutive pathway
integral membrane proteins, continuosly secreted proteins
peroxisomes
0.5 µm, small membrane bound organelles containing catalase and other oxidative enzymes used to oxidize a wide range of organic substances such as very long fatty acids to convert ethanol to acetaldehyde.
catalase
oxidative enzyme, breaks down long chain FAs.

degrades toxic hydrogen peroxide, a byproduct of oxidation
Lysosomes and peroxisomes have ________ precursors.
different
adrenoleukodystrophy
inherited X-linked disorder
accumulation of lipid in brain/adrenals
progressivebrain damage, failure of adrenal glands, death
Zellweger syndrome
congential disease
mtations in proteins responsible for transport of peroxisomal enzymes from cytoplasm --> nonfunctioning peroxisomes

improper formation of myelin sheath, affect brain development, die before 6 mo age
mitochondria
produce ATP through oxidation of pyruvate and FAs
present in virtually all cells, esp. where large amounts of energy are used
cells which do not contain mitochondria
red blood cells and terminal keratinocytes
evidence of symbiosis theory of mitochondria
1. contain seperate genome
2. posses dual membrane
3.increase number by division
mitochondrial matrix
space enclosed within inner mitochondrial membrane
Mitochondria are able to....
migrate from one area of the cell to another to supply energy where needed.
outer mitochondrial membrane
contacts the cytoplasm on outer side
contacts intermembrane space on inner side
contains pores/anion channels which allow passage of small molecules, proteins, ions, etc
inner mitochondrial membrane
thinner than outer membrane
highly folded into cristae
contains many enzymes involved in energy production
composition of intermembrane space
pH and ionic composition similar to cytoplasm
protein composition is unique, enzumes that use ATP are generated here
cytochrome C located here
cytochrome C
initaites apoptosis
mitochondrial matrix
enclosed in inner mitochondrial membrane
contains soluble enzymes for Krebs cycle, DNA/RNA transcription/translation

mitochondrial DNA, ribosmes and RNAs

electron dense granules
electron dense granules
store Ca 2+, reflect role in metabolism of ions
Approximately ______ of the proteins involved in oxidative phosphorylation are encoded by mitochondrial DNA.
1/5

(Therefore mitochondrial myopathies [ex. lactic acidosis, cardiomyopathy] can have nuclear OR mitochondrial origin.)
nucleus
5-10 µm
large membrane bound
contains genome
chromatin
DNA bound to histones
nuclear envelope
consists of two membranes, perinuclear space between them, nuclear lamina and nuclear pores
outer nuclear membrane
closely resembles the membrane of the RER, continous with chambers of the RER
ribosomes attached to cityplasmic surface
perinuclear space
continous with lumen of RERE. can transport proteins fro RER to nucleus.
inner nuclear membrane
distinct ability to bind chromatin and lamins, supporetd by rigid network of intermediate filaments
lamin
provides stability, intermediate filaments, form dense meshwork beneath nucleus

***DISASSEMBLE during mitosis, reassemble after mitosis
nuclear lamina
thin, protein-dense layer, represents skeleon of nucleus formed by lamins
nuclear pores
70-80 nm openings through nuclear envelope, allow communication between cytoplasm and nucleus via <9nm particles

complex structure with protein spokes projecting into lumen of the more to the central plug
nucleosomes
smallest unit of chromatin, consists of 8 histones (2 each of H2A, H2B, H3, H4) and 166 DNA base pairs
beads on a string
nucleosomes joined by 48 bp DNA segment link

fiber = 11 nm = basic level of DNA packaging
intermediate level of DNA packaging
30 nm fiber
euchromatin
loosely packed, lightly stained, transcriptionally active DNA found in metabolically active cells such as neurons
heterochromatin
densely packed, dark staining, transcriptionally inactive DNA found in metabolically inactive cells
3 main locations of heterochromatin
1. periphery of nucleus, marginal heterochromatin is attached to the nuclear membrane
2.karyosomes
3. in association with nucleolus
karyosome
discrete body of chromatin irregular in shape and size, found throughout nucleus
chromosomes
condensed and organized chromatin found in dividing cells
centromere
place where two chromatids of a chromosomes are joined together
kinetochore
place where each chromosome becomes attached to the microtubles of the mitotic spindle

formed on the centromere
nucleolus
small area within nucleus in which ribosomal RNA is processed and assembled into ribosomal subunits
3 morphologically distinct regions of nucleolus
1.fibrillar centers
2. dense fibrillar component (pars fibrosa)
3. granular component (pars granulosa)
fibrillar centers
contain DNA loops with rRNA genes and transcription factors
dense fibrillar component
(pars fibrosa)
contains riboslmal genes thate rae being translated and large amounts of RNA
granular component
(pars granulosa)
site for ribosome assembly, made of densely packed custers of pre-ribsomal particles/partially assembled subunits
3 functions of cytoskeleton
1. determines shape of cells
2. provides structural support for organelles
3.plays a major role in cell motility (esp. in mitosis and cytokinesis)
3 major types of cytoskeleton filaments
1.actin filaments
2.microtubules
3. intermediate filaments
actin filaments
thin (6 nm), + and - ends, mostly found in periphery
3 roles of actin filaments
1.cell movement
2.cell shape
3. organelle transport
2 forms of actin
1. G-actin
2. F-actin
G-actin
soluble monomeric globular protein, can polymerize into F-actin, polymerization occurs head to tail
F-actin
double-stranded helical filament
has head to tail polarity
grows faster on one end
direction allows for motor protein to travel
spontaneous assembly at + end, dissassembly at - end gives effect of movement
Actin filaments are also known as
thin filaments
2 functions of actin/thin filaments
1. cortex formation
2. myosin interaction
cytoplasmic cortex
actin filaments form a thin sheath beneath the cytoplasm
5 functions of the cytoplasmic cortex
crosslined actin filaments
1. resist cell deformation
2.transmit forces
3. restrict movement of organelles
4. reinforce plasma membrane
3. restrict lateral motion of integral membrane proteins
myosin
interacts with actin to generate force and movement. (motor associated with thin filaments)
microtubules
cytoskeletal elements present in all cells (except erythrocytes)
3 functions of microtubules
1.organelle and vesicle movement (sometimes over long distances, ie. neuron)

more transport = more microtubules

2.mitotic spindle and chromosome movement
3.beating of cilia and flagella (proteins manipulate microtubules --> movement)
structure of microtubules
stiff, non-branching,cylindrical polymers, made of a-tubulin and ß-tubulin, polymerized side to side and head to tail ---> plus and minus end ---> can have transport
Plus end of microtubules associated with
cell periphery
Minus end of microtubules associated with
centriole/ microtubule-organizing center
2 types of microtubule motor proteins
1. dyneins
2. kinesins
function of microtubule motor proteins
use ATP energy to generate force that moves the motor and materials attached to it along the microtubule
Dyneins (involved in beating of cilia and flagella) move toward the ______ end of the microtubule.
minus
Kinesins move toward the ______ end of the microtubule.
plus
4 higher order structures of microtubules
1.cilia
2.flagella
3.centrioles
4.microtubule-organizing centers
axoneme (structure)
core of cilia and flagella, composed of 9 doublets and a central pair of microtubles
axoneme (function)
generates force for the movement of cilia and glagella (dynein arm grabs from one doublet to the other)
centriole (basal body)
found at the base of each cilium or glagellum, composed of microtubles arranged into 9 triplets WITHOUT THE CENTRAL PAIR
microtubule-organizing center (MTOC)
consists of two centrioles, virtually all cellular microtubules arise from the MTOC, most human cells contain MTOC
(not neurons and red blood cells which ar e incapable of division)
function of intermediate filaments
strong bu flexible polymers that provide mechanical support for cells
Why don't intermediate filaments have motor proteins associated with them?
They do not have polarity.
Lamins
(Nucleus)
form a meshwork of filamens on the inner side of the nuclear envelope, where they form the nuclear lamina and provide structural support for the nucleus
keratins
(epithelial cells)
vimentin
(connective tissue)
desmin
(muscle cells)
glial fibrillary acidic protein (GFAP)
(support cells of glial cells)
4 functions of intermediate filaments:
form bndles between the plasma membrane and nucleus to
1.spread tensile forces
2.maintain cell architecture
3.act as a cocoon when cell is damaged
4.anchor ion channel proteins