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68 Cards in this Set

  • Front
  • Back
Principles of Geology
The book that Charles Lyell wrote that gave the ideas for Darwin
uniformity of law
assume that the laws of physics and chemistry have not changed throughout the earth's history
uniformity of process
geological processes are the same throughout time
gradualism
geological changes occur in small increments and accumulate through times to produce large changes
nondirectionalism
dynamic steady state
Uniformitarianisms 4 precepts
uniformity of law
uniformity of process
gradualism
nondirectionalism
Alvarez's theory of impact crisis
A big meteor hit the world and modified the environment all of a sudden. Mass extinction
Huxley
Darwin's arguer
hypothetical deductionism
try to find mistakes in a theory and correct them to bring closer to truth
potentially falsifiable
to determine if a theory is good, determine how many parts have possible disproofs
Evolution as such
the biological world is neither constant, nor forever cycling.
It is directionally changing
What evolves?
A population, not an organism
Common descent
all plants and animals have descended from 1 form
Evolutionary lineages
a series of ancestor descendant populations through time
The 4 possible events of lineage
persist without change
persist with change
branch, or bifurcate
go extinct
Divergence of character
seperate lineages that accumulate differences from common ancestors and each other
Phylogeny
structure of evolutionary history taking form of braching tree of evolutionary lineages
Ernst Haeckel's idea
Ontogeny recapitulates phylogeny
Ontogeny
development of organism from egg to adult to end of life
Ontogeny recapitulates phylogeny
development repeats adult stages of ancestral forms. (Gills in mammals)
Notochord
defining characteristic of chordates
required for early induction of nervous system. a mutation is lethal
ampioxous
small group that uses notochord as support structure as adult
Terminal addition
Henkel says that major features of anatomy newly acquired in adulthood are passed genetically - not true
condensation
Henkel said as new features are added, older features are condensed into shorter developmental forms - not true
Caenogenesis
evolution of new characters restricted to pre-adult stages
heterochrony
evolutionary change in developmental rates and timing.
heterotropy
evolutionary change of physical location of developmental processes
HOMOLOGY
Owen - the same organ in different organisms under every variety of form and function
Phylogeny from homology
-nested hierarchy of groups within groups. compare monkeys
monphylytic group
a group of 2 or more species/lineages that include the most recent common ancestor (MRCA) of all members of the group and ALL of its descendants
Clade
monophylitic group
Synapomorphy
shared derived character (ancestor lacks it)
In group
the group currently being studied
outgroup
a close relative to the ingroup but outside the study group
Steps to test for similarities in homologous DNA strands
1. PCR
2. Alignment
3. Which sites show variation with ingroup
4. Compare outgroup to ingroup. If ingroup shares something with outgroup, the remaining is derived, and the other is ancestral. If 2 have the same, closer than other
Parsimony
Our best hypothesis is the one with the least number of evolutionary changes
Homoplasy
character similarity that does not represent common ancestry
parallelism
same evolutionary change occurs on two different lines. The lineages diverge from the ancestor but not from eachother.
reversal
evolutionary return to a character formerly changed or lost
convergence
origin of superficially similar features by dissimilar evolutionary processes
Maximum Likelihood
a model of DNA evolution that puts weight on slowly evolving parts as opposed to rapid. Weight is placed on least likely DNA substitutions
Distance Matrix Methods
Model meant for setting preliminary methods. See if there is a structure to data. Analyze a matrix of distances. Not so accurate but quick.
endosymbiosis
where one organisms is taken up by another for overall symbiosis. Origins of mitochondria and plant chloroplasts. Most euks have mitochondria
Multiplication of Species/allopatric speciation
Another of Darwin's ideas. The geographic splitting of a population followed by evolutionary divergence of the seperate parts.
Biological Species Concept
A reproduction of community of populations reproductively isolated from others that adopts a specific niche in nature.
niche
set of resources actually or potentially used by a population
reproductive barriers
anything that inhibits interspecies fertility
Examples of reproductive barriers: Prezygotic
Temperal - seasonal mating
ecological - favor particular habitats
behavioral-courtship rituals
mechanical-genital structure
gametic - change in chemical composition of fertilization
Examples of reproductive barriers: Post zygotic
hybrid inviability - devlopment fails after zygote forms
hybrid sterility - viable individual produced but cannot create fertile gametes
hybrid breakdown - when bred from hybrid, other phenotypes seen
reinforcement
whether selection on hybrids with post zygotic isolation leads to prezygotic isolation
Problems with Biological species concept
1) only applies to sexual forms (controversiol)
2) no temporal dimension - does not speak to those who see species as lineages through time
3) not a single unit of evolution. Some can breed even if different phenotypes
4)not practically testable
Phylogenic species concept
-lineage of ancestor-descendant populations DIAGNOSABLY distinct from other such lineages
sources of allopatry
vicariance
founder event
vicariance
subdividing a formerly continuous habitat
-founder event
a rare dispersal across a pre-existing barrier.
Natural selection
variation produced by random with respect to an organism's needs
Progressive adaptation
constant improving of life forms over time.
Algorithmic nature of selection requirements natural selection
need a population
heredity
variation
association fo variation with ability to reproduce
Adaptation
a trait that evolved bynatural selection for a particular role
exaptation
trait adopted by natural selection for a role incidental to the traits origin
Abstraction and simplification
identify what is essential and remove distracting elements
Why is there no single best model?
balance between reality generality and high precision
3 main abstractions and simplifications of DNA properties
1) DNA can replicate
2)DNA can mutate and recombine
3) DNA encodes information that interacts with the environment to influence phenotypes
identity by descent
replication without mutation
coalescence
go back far enough to find common ancestral form of DNA. That point.
Gene tree
all copies of homologous DNA trace to common ancestral molecule (not population lineages)
haplotypes
a set of identical haploid genomes for a specified unit of measurement
Darwin according to myer
1)Evolution as such
2) gradualism
3) natural selection
4) common descent
5) multiplication of species