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433 Cards in this Set

  • Front
  • Back
typhoid is a _______________ infection
systemic;

starts at the GI, spread to other areas
ALL enteroinvasive bact. are;
obligate intracellular pathogens
what kind of pathogen uses the zipper OR trigger mechanism of entry?
entero*invasive*
oocysts ~~
Cryptosporidosis
parentarel =
through other than the mouth
hepatitis: ALL 5 types infect:
hepatocytes
only patients already infected with Hep B can get:
Hep D
4 symptoms of hepatitis:
1. fatigue

2. nausea

3. fever

4. coke-urine
specific diagnosis of hepatitis infection requires:
serologic testing
4 serum liver markers of hepatitis =
1. ALT

2. AST

3. bilirubin

4. alkaline phosphatase
Hep A and E are shed from the liver in:
bile
A and E virions are:

(2)
1. non-enveloped

2. stable in the environment
Hep B, C, and D are NOT stable in:
the environment
"chronic" hepatitis ~~
longer than 6 months
Hepatitis A features:

(3)
1. no envelope

2. (+) RNA

3. picornavirus family
Hep A is REALLY stable against:

(2)
1. high Temp

2. low pH
***Hep A hijacks:***
**envelope from host** while inside the body
vaccine against Hep A is a:
whole virus vaccine
distinguishing features of Hep A infection:

(3)
1. transferred by fecal-oral transmission

2. relapsing hepatitis is common

3. fulminant hepatitis is not uncommon
**even after 2 weeks of infection with Hep A,**
giving a pt Hep A vaccine will prevent the disease
features of Hep C:

(2)
1. (+) RNA

2. enveloped
life cycle of Hep C: RNA into cytoplasm =>
replication assembly line => membranous web (vesicles) => replication

=> extracellular release OR spread to adjacent cell
Hep C usurps:
MANY host factors in order to replicate
***in order to spread extracellularly, Hep C takes over:***
VLDL

=> circulates within apolipoproteins
Hep C's diversity/variability of surface proteins =>
chronic infections
***___% of peope will be persistently infected with Hep C until treated***
70%
a person persistently infected with Hep C will be aymptomatic until:
he starts noticing symptoms of liver cirrhosis
Hep C is able to suppress:
the II signaling pathways that sense viral RNA
immunity against Hep C is:
questionable
Hep C infection is diagnosed by:

(2)
1. Hep C AB's

2. RNA PCR
treatment of Hep C =
Direct-Acting Antivirals

- MUST be used in *combos* to avoid R
Hep B = DNA virus that:
replicates through an RNA intermediate
**Hep B uses ____ to replicate**
RT

DNA to RNA back to DNA via RT
**Inhibition of RT will suppress Hep B, but will not:**
produce immunity, since the cccDNA is still found as a plasmid in the nucleus
___% of people with Hep B are *asymptomatic*
50%
**almost all adults infected with Hep B:**
clear the infection
**infants and immunocompromised have a high risk of:
NOT clearing a Hep B infection and thus becoming life-long carriers
co-infection of Hep B with Hep D greatly increases:
the risk of mortality
markers of Hep B infection, **acute OR chronic:**

(2)
HBsAg + = infectious

HBeAg + = highly infectious
IgM HBc AB + =
*acute* Hep B infection
HBs AB + =
full immunity
transmission of Hep B comes via:

(4)
1. mother to fetus at birth

2. b/w young children

3. sexual (common and efficient)

4. shared needle (parentenal)
treatment of Hep B:
RT >> interferon

- goal is *suppression* of the disease, to prevent cirrhosis, liver failure, and HCC
first-line oral antiviral for Hep B =
tenofavir
second-line antiviral for Hep B =
adefovir
Hep B vaccine is:
great

- first cancer vaccine, because it challenges HCC
Strongyloides is NOT:
a hookworm
When you see metronidazol, think:

(3)
1. anaerobics

2. parasites

3. bact. causes of vaginosis
most common STI in the US =
Chlamydia
except for syphilis, women tend to:
have STI's more
exposure to STI does NOT mean:
infection of STI
"natural history" of the infection =
how you got expose, then infected; what stage of the infection you're in, etc.
3 reasons why adolescent women tend to have greater rates of STI's:
1. fewer Lactobacilli => higher vaginal pH

2. thinner genital tract mucus

3. cervical ectopy
cervical ectopy =
squamo-columnar epithelium of the cervix (aka endocervix) extends down into the vagina

=> easier for pathogens to attach

- adults have just squamous epithelium there
ectopy = part of body is in:
abnormal position
first-line defense against STI pathogens =

(2)
1. genital epithelium

2. mucous
second line of defense against STI pathogens =
II

- which includes TLR's and antimicrobial peptides
third line of defense against STI pathogens =
AI
AI defense against STI pathogens includes:

(3)
1. IgA in cervix and urethra

2. IgG in vaginal/semen secretions

3. T cells (most abundant in the lower genital tract)
**risk factors for STI's**

(2)
1. multiple partners

2. ...at the SAME TIME
vaccines against STI's are:
RARE

- only 2
the only 2 vaccines against STI's =
1. HPV vaccine

2. Hep B vaccine
3 major bacterial ST pathogens =
1. Chlamydia

2. N. gonorrhea

3. Treponema pallidum (syphilis)
major protozoan that causes STI's =
Trichomonas vaginallis

(trichomoniasis)
**many STI's cause NO:
(or mild) signs/symptoms
genital herpes are often:
recurrent
some ST pathogens gain access to the body via the mucosal surfaces, but:
DON'T affect the mucosa

- others DO cause mucosal disease
***4 common features of ST pathogens:***
1. **NOT found free in the environment**

2. **humans are the ONLY reservoir**

3. commonly asymp, b/c microbes are NOT eliminated by the IS

4. no vaccines (except HPV and Hep B)
women are often:
asymptomatic with STI's
2 adverse effects of STI on a woman's reproductive health:
1. ascending infection (damage due to host response)

2. bad pregnancy outcomes
3 results of infections that STI's cause women:
1. PID

2. infertility

3. ectopic pregnancy
bad pregnancy outcomes due to STI include:

(3)
1. preterm birth

2. low birth weight

3. infections of infant during vaginal birth
asymptomatic does NOT mean:
inconsequential
synergy of STI's and HIV: STI's increase:
the risk of acquisition/transmission of HIV
how do STI's increase the risk of acquisition/transmission of HIV?

(2)
1. breaking mechanical barriers to HIV

2. increasing inflammation => brings HIV-susceptible cells to sight of HIV
active STI ~~ more likely to:
have/get HIV
microscopy ~~

(2)
1. low sensitivity

2. high specificity
culture ~~ high:
specificity
**we CANNOT culture:**
T. pallidum bact.
virus cultures take more:
time/effort/money
**not all STI's produce:**
an AB response
serology detects:
AB's in the serum

- indicative of past infection
serology is sometimes able to distinguish between:
acute and chronic infections
**syphilis infection produces 2 kinds of AB's:**
1. AB's the recognize cardiolipin on *host* membranes

2. AB's that T. pallidum antigens
AB's that recognize host cardiolipin are detected by:
**non-treponemal tests**
2 names of non-treponemal tests:
RPR, VDRL
non-treponemal tests have high sensitivity but modest specificity; =>=>
**screening tests**

- need to be confirmed by trep tests
(other conditions, including pregnancy and rheumatoid arthritis, also make:
AB's against host cardiolipin

=> have to confirm that it's syphilis)
AB's against T. pallidum antigens are detected by:
**treponemal tests**

- TPPA, TPHA
**treponemal AB's stick around; =>
treponemal tests remain positive even after treatment**

(non-trep AB's do NOT => non-trep tests are negative after treatment)
2 test approaches for syphilis:
1. old-school

2. new approach
old-school approach to test for syphilis:

(2)
1. use non-trep first

2. if positive, confirm with treponemal test
interpreting the old-school test results:

(3)
1. if non-trep is negative, pt does NOT have syphilis

2. if positive / trep-negative, pt. does NOT have syphilis

3. if pos / pos, pt. HAS syphilis
what is the new-school approach to treating syphilis?

(2)
1. use new, fast Tp

2. if pos, use non-trep
new-school approach: what does it mean if the Tp is positive, but the non-trep is negative?

(3 possible meanings)
1. pt could have had treated or untreated syphilis in the past

2. pt has early, primary syphilis

3. Tp was a false positive.
NAAT is a great:
non-invasive way of testing for STI's
syphilis: men have it more, and it's:
rising
syphilis has lethal synergy with HIV:

(4)
1. syphilis destroys epithelial barrier via genital ulcers

2. recruits HIV-susceptible cells into its lesions

3. patients with early syphilis have high HIV loads

4. risk of neurosyphilis is 3-5x greater in pts with HIV
stages of syphilis: incubation period (3 weeks) =>
primary syphilis => secondary => latent period => tertiary
neurosyphilis =
T. pallidum is IN the CNS
neurosyphilis can occur at ANY:
stage of syphilis
later forms of neurosyphilis affect:
the actual brain and SC
primary syphilis:

(3)
1. ~ painless ulcer

2. ...in anogenital region and mucous membranes
(including lips, tongue, cheeks, fingers)

3. ...that heals in a few weeks
secondary syphilis ~~
spread of spirochetes
secondary syphilis strikes a few weeks after:
the disappearance of the ulcer
secondary syphilis ~ systemic symptoms:

(4)
1. malaise

2. fever/head

3. sore throat

4. hepatitis
***indicative symptoms of secondary syphilis = ***

(2)
maculopapular rash and condyloma lata
maculopapular =
red and raised
condyloma lata =
genital warts
**secondary syphilis will resolve in:**
an immunocompetent person
latent syphilis:

(2)
1. asymp

2. either early or late
early latent syphilis ~~

(<1 year)
**infectious**
late latent syphilis ~~

(2)
1. non-infectious (except mother to child)

2. longer course of treatment
diagnosis of latent syphilis is made ONLY:
with blood test
tertiary syphilis occurs:
10-30 years after initial infection
without therapy, latent syphilis becomes some form of tertiary syphilis in:
1/3 of patients
tertiary syphilis can result in:

(3)
1. neurosyphilis

2. cv problems

3. gummatous cyphilis
gummatous syphilis =
nasty ulcers on the skin
50% of pregnancies of women infected with syphilis =>
miscarriage
40-70% of infants born to women with syphilis have:
congenital syphilis
congenital syphilis ~~
characteristic bone/eye/ear/brain damage

- including Hutchinson's incisors (moon-shaped bites)
syphilis is caused by:
Treponema pallidum
Treponema palladum:

(3)
1. spirochete

2. **outer membrane lacks LPS**

3. **very few exposed proteins**
Treponema pallidum CANNOT grow in:
culture
pathology of T. palladum:

(2)
1. spirochetes attach *anywhere* - can infect many tissues

2. active motility is essential for invasion and dissemination
no LPS of spirochetes =>
TLR4 is NOT activated
b/c very few spirochetes' proteins are not exposed on the surface, spirochetes can:
escape immediate detection
**spirochetes do NOT release:**
toxins
early syphilic lesions ~

(2)
CD4+, CD8+ cells

=> activated macrophages infiltrate the lesion
**AB's against T. palladum can opsonize and neutralize, but CANNOT:
prevent future infections of syphilis
treatment of syphilis:

(3)
1. 1 dose of penicillin cures primary OR secondary infections

2. use Z-pak if can't tolerate penicillin

3. R to Z-pak is rising
Trichomona vaginallis infects:
both males and females
Trichomona is found ONLY in:
the human genital tract

- no other reservoir
Trichomoniasis is the most common:
non-viral STI
in women, prevalence of Trichomoniasis increases with:
age
Trichomona is a:
protozoan parasite
Trichomoniasis is associated with:
HIV and other STI's
Trichomona vaginalis lacks mit. and instead has:
hydrogenosomes
treatment of of Trichomoniasis reduces:
**HIV RNA in vaginal fluid**
**Trichomoniasis has STRONG synergy with:**
HIV
clinical presentation of Trichomoniasis in women:

(3)
1. common site of infection = vagina, urethra, endocervix

2. frothy vaginal discharge, strawberry cervix

3. odor, itching, dysuria
dysuria =
painful or difficult urination
clinical presentation of Trichomoniasis in men:

(4)
1. watery discharge

2. urethritis

3. dysuria

4. though it's commonly asymp
73% of women are symptomatic with:
Trichomoniasis

- 77% of men are ASYMP
immune response to Trichomoniasis:

(2)
1. NO protection from re-infection

2. inflammation is associated with influx of neutrophils
diagnostics of Trichomoniasis:

(4)
1. wet mount microscopy -

2. culture

3. rapid antigen

4. NAAT's
wet mount microscopy requires:

(2)
1. vaginal swab/male urine sediment

2. must be performed within 15 minutes
wet mount for Trichomoniasis is NOT:
a great diagnostic
treatment of Trichomoniasis =

(2)
metronidazole,

tinidazole
metronidazole and tinidazole are activated within:
hydrogenosomes

=> toxic nitro-radicals that target parasite DNA and prot's
R of Trichomona to metronidazole:
increasing
N. gonorrhea is also called:
gonococcus / GC
gonorrhea is also called:

(2)
the clap,

the drip
gonorrhea is MOSTLY _____________ but can have a:
asymptomatic;

broad spectrum of clinical presentations
***there is no such thing as a ____________________ of gonorrhea***
chronic carrier

- if you have it, you're ALWAYS infected, b/c it's a frank pathogen
uncomplicated gonorrheal infections take of the form of ____________________ in men
urethritis
UGI's take the form of ____________________ in women

(2)
1. cervical inf's

2. urethral inf's
cervicitis ~
pus of neutrophils
UGI's can also be:

(2)
1. oropharyngeal infections (in both men and women)

2. rectal infections (esp. with MSM)
pharyngitis ~
inflamed throat
**watch out when testing throat for UGI, because the throat sometimes contains:**
N. minigicoccus as normal flora

- **identical** to N. gonorrhea in gram stain
symptoms of UGI (urethritis) in men:

(3)
1. abrupt onset

2. dysuria

3. profuse, purulent discharge
apart from male urethritis, all other UGI's are:
often asymptomatic and hard to differentiate from other STI's
gonoccocal conjuctivitis:

(2)
1. rare in adults

2. acquired by newborns during passage through infected birth canal
2 kinds of complicated gonorrheal infections (CGI's):
1. PID

2. GCI
PID stands for:
pelvic inflammatory disease
PID =

(3)
endometritis, salpingitis, pelvic peritonitis, and inflammation of other parts of the female repro system
PID features:

(2)
1. occurs within a few days of menses

2. **occurs in 10-20% of women with cervititis**
DGI stands for:
disseminated gonococcal infection
DGI occurs when:
GC enters bloodstream => skin and joints => rashes and arthritis

- rare
N. gonorrhea are GN _____________
*diplococci*
N. gonorrhea are really good at:
taking up DNA => variation/R
N. gonorrhea are R to:

(2)
1. neutrophils' ROS

2. regular bacteriocidal effects of human serum
what are the 2 pathogenic Neisseria?
1. N. gonorrhea

2. N. meningococcus
N. gonorrhea - no capsule =
rare that it would disseminate
N. gonorrhea do NOT have:
a capsule

- N. meningicocci DO
***3 virulence factors of N. gonorrhea:***
1. adherence

2. antigenic variation

3. antibiotic R
adherence of N. gonorrhea:

(2)
1. pili for initial, long-range attachment

2. opacity prot's for tighter adhesion
also on N. gonorrhea surface:
LOS

(~LPS)
the following 3 factors of N. gonorrhea can undergo antigenic variation:
1. LOS

2. opacity prot's

3. pili
N. gonorrhea antigenic variation is:

(2)
1. spontaneous

2. frequent
N. gonorrhea grows R to a drugs every:
20 years
only effective drug for N. gonorrhea on the market today =
ceftriaxone
Chlamydia spp are obligate:
**intracellular** bact
3 Chlamydia spp pathogenic to humans:
1. C. trachomatis

2. C. pneumoniae

3. C. psittaci
C. psittaci infects:
parrots

- inhaling parrots feces dust will infect humans
who gets infected more with Chlamydia?
women
trend of Chlamydia:
**rising steadily**
different strains of Chlamydia are differentiated by:
different surface proteins

=> ocular, genital, lymphogranuloma (genital warts) types
C. trachomatis genital infections are often:
completely asymp
if C. trachomatis genital infections are symptomatic, they cause (3) in men:
1. non-gonococcal urethritis

2. epididymitis

3. proctitis
if C. trachomatis genital infections are symptomatic in women, they cause:

(3)
1. cervicitis

2. urethritis

3. PID
symptoms of Chlamydia trachomatis infections are similar to:
gonorrheal infections
Chlamydial infections ~~

(2)
1. mild local infections

2. severe PID

- it's the inverse in gonorrhea
complications of C. trachomatis genital infections for both men and women =
arthritis
compared to gonorrheal discharge, Chlamydial discharge is:

(2)
more clear, watery
Chlamydial life cycle is unique:

(5 steps)
1. EB's attach to epithelium

2. convert to RB's inside the cell

3. inclusion grows as RB's multiply

4. reconverted to EB's

5. released to infect other cells
EB's =

(3)
elementary bodies

1. extracellular form of Chlamydia

2. **infectious**

3. metabolically inactive
RB's =

(3)
reticulo-bodies

1. intracellular

2. non-infectious

3. metabolically active (divide/multiply)
for energy, RB's use:
ATP from the host cell's mit
inclusion =
membrane that RB's divide and grow in

- recruits host mit to itself
Chlamydia bacteriology:

(4)
1. GN

2. has LPS and MOMP on the surface

3. small genome

4. energy parasite
MOMP of Chlamydia =
major outer memb prot
pathogenesis of Chlamydia - infected epithelail cells release:
pro-inflammatory cytokines

=> PMN's, NK's, phag, APC's

=> continual chronic inflammation

=> necrosis, scarring
diagnosis of BOTH gonorrhea and chlamydia: gold standard =
NAAT

- high sensitivity, specificity
NAAT's are still positive within:
10-14 days after treatment
bacterial vaginosis can be caused by:
LOTS of different organisms
bacterial vaginosis is *common* - it occurs most with:
the sexually active, but also with those who are not active
bacterial vaginosis =
the alteration of normal vaginal flora, which is replaced with anaerobes
what is the normal vaginal flora?
Lactobacilli spp
*BV* flora ~~
absence of Lactobacilli and presence of large numbers of GN/GV coccobacilli

- called clue cells
Lactobacilli produce the protective:
H2O2
2 pathogens associated with BV:
1. Garderella vaginalis

2. Mobiluncus spp

- NOT ALWAYS present
- could be secondary invaders instead of primary cause
signs/symptoms of BV:

(3)
1. discharge (normal or white)

2. elevated vaginal pH

3. strong odor
diagnosis of BV: any 3 of the following:

(4)
1. clue cells

2. pH >4.5

3. homogenous, adherent discharge

4. whiff test
whiff test =
add drop of KOH, should be a fishy smell
adverse consequences of BV: associated with increased risk of:

(3)
1. acquisition/transmission of HIV

2. other STI's

3. developing PID (if infected with GC/Chlamydia)
in pregnant women, BV ~~
2x inc. risk for pregnancy problems
treatment of BV =

(3)
1. metronidazole

2. clindamycin

3. try to prevent relapse (which is common)
**treatment of BV does NOT:**
*reverse* adverse pregnancy risk
VVC stands for:
vulvovaginal candidiasis
VVC =
vaginal yeast infection
VVC occurs when:
protective Lactobacilli are eliminated *by antbibiotics*

=> **Candida spp overgrow**
Candida species can be part of:
normal vaginal flora
prevalence of VVC is high in:

(3)
1. pregnant

2. uncontrolled diabetes

3. immunocompromised
80-90% of VVC is caused by:
Candida albicans
signs/symptoms of VVC =

(3)
1. *itching*

2. chunky discharge
- rare, but classic if present

3. penile erythema in partner
filamentous form of C. albicans ~~
active form of disease
VVC does NOT depend on:
organism burden

- but rather to an allergic rxn despite low burden
best diagnostic of VVC =
**wet mount**
treatment of VVC:

(2)
1. short course of anti-fungals for uncomplicated cases

2. longer-term anti-fungals for complicated VVC's
"complicated VVC's" ~~
underlying conditions, recurrence, immunocompromised
lower UTI is also called:
cystitis
cystitis =
bladder infection
symptoms of cystitis =

(5)
1. inc. freq

2. dysuria

3. strongury

4. hematuria

5. changes in smell of urine
strongury =
slow, painful urination
hematuria =
RBC's in urine
upper UTI is also called:
pyelonephritis
symptoms of pyelonephritis =

(4)
1. fever

2. rigors

3. vomiting

4. loin pain
onset of pyelonephritis is:
rapid
pyelonephritis can be prevented by:
treating cystitis
defenses against UTI's:

(5)
1. defensins (local antimicrobials)

2. Lactobacilli

3. mucin layer to block adherence

4. lysozymes

5. Tamm-Horsfall Prot
***what do Tamm-Horsful Prot's do?***
bind to UPEC that express *Type 1 pili*

=> inhibits UPEC's
susceptibility to UTI's is:
50x greater in women than in men

- shorter urethra

- pregnancy, spermacide, and normal intercourse also inc. risk for women
recurrent UTI's ~~
blockage, *greater density of UPEC r's*
**a bladder infection in men is almost ALWAYS:**
indicative of a *different* condition

(not UTI)
causes of UTI's:

(2)
1. UPEC (80%)

2. Staph saprophyticus
we're not sure if Staph saprophyticus causes:
**upper** UTI's
pathogenesis of UTI's: pathogen starts in:
intestines => urethra => bladder

=> form biofilm on inner surface of the bladder => pods that bulge out
what causes the symptoms of UTI's?
TLR4-dependent host inflammatory response
**what is the key to UPEC virulence?**
adherence
UPEC's Type 1 pili are necessary for causing:
cystitis

- bring them from intestines all the way up through bladder
what kind of pili are necessary for UPEC to cause pyelonephritis?
Pap pili

- necessary to attach to kidney epithelial cells
UPEC adherence is directly proportional to:
severity of infeciton, chance of recurrence
biofilms form ________ a catheter
inside
diagnosis of UTI's: gold standard =
*quantitative* urine culture

- measures number of colony-forming bact.

(or urine dipstick)
treatment of UTI's:

(2)
1. short course for e/o

2. proceed to long course if pt doesn't respond
**caveat with treating UTI's:**
**watch out for yeast infections following UTI antibiotics**
asymp UTI is NOT:
treated
asymptomatic UTI's are not treated, EXCEPT in the case of:

(2)
1. pregnant women

2. those about to undergo surgery
cranberry juice may:
prevent UTI's,

but hard to say if if cures them
defining property of all herpes viruses =
**latency**
**major differences between HSV and VZV = **
HSV ~~ local inf,

VZV ~~ dissemination to the LN's => skin
VZV stands for:
varicella zoster virus
features of Herpes viruses:

(3)
1. DNA

2. capsid

3. lipid membrane derived from host
Herpes viruses are classified in 3 families; HSV1, HSV2, and VZV are all:
alphaherpes viruses
**3 features of alphherpes diseases:**
1. acute infection

2. latency in distinct locations

3. reactivated inf's
acute herpes infections range from:
sub-clinical to mildly severe
both primary and reactivated inf's of Herpes virus are more severe in:
the immunocompromised
pathogenesis of herpes virus comes in 2 forms:
1. direct cell killing

2. immune-mediated disease
immune-mediated disease as a result of herpes infection comes in the the form of:

(2)
1. sepsis

2. corneal scarring
corneal scarring is a result of:
repeated attacks against reactivating herpes virus in the eye
herpes infections are NOT:
seasonal
the vast majority of primary HSV1 and VZV infections occur in:
adolescents
how is HSV (both types) transmitted?

(3)
1. saliva

2. lesions

3. sexual activity
how is VZV transmitted?
respiratory droplets
what region does HSV1 tend to infect?
the orofacial area
what region does HSV2 tend to infect?
the genital area
lots of people get infected with HSV and:
NEVER experience symptoms

- 75% of people are seropositive for HSV1
**life cycle of herpes viruses:**

(3)
1. DNA replicated in the nucleus

2. virions mature in the cytpoplasm

3. retrograde to neurons to become latent
when a herpes virus becomes latent, its DNA:
turns from linear to circular, hiding itself as an episome in the neuron nucleus
what is the site of HSV1 latency?
the Trigeminal Ganglia
what is the site of HSV2 latency?
sacral ganglia (S2-S5)
what is the site of VZV latency?

(2)
1. ALL DRG's

2. TG
herpes: primary infection =>
retrograde to neurons => latency => reactivation

=> 1. retrograde to CNS (rare) => encephalitis
2. anterograde to eye/mouth/genital (HSV) or skin(VZV)
symptoms of HSV1 infection:

(4)
1. gingivostomatitis

2. pharyngitis

3. flu-like symptoms

4. herpetic whitlow on skin
symptoms of HSV infections resolve in:
1-2 weeks
symptoms of HSV2 infection:

(1)
genital sores
reactivated HSV infections =>

(4)
1. cold sores

2. genital herpes

3. keratitis (=> corneal scarring)

4. *asymptomatic shedding*
keratitis =
inflammation of the eye
asymptomatic shedding of HSV =
a significant source of transmission
primary infection of VZV =
chicken pox

=> itching, *non-uniform lesions*
complications from primary VZV infections:

(2)
1. rare in children

2. severe in adults
quality of immunity to chicken pox after infection:
long-lasting
VZV spreads via:
coughing droplets,

since it disseminates to the lungs
reactivated VZV infection =
Shingles
shingles =
rash in *dermatomes*
common complication of shingles =
post-herpetic neuralgia
neuralgia =
pain along a nerve
host responses to herpes infection:

(4)
1. epigenetic/histone silencing of viral DNA

2. interferons => anti-viral state

3. PKR => inhibition of cell prot synth.

4. pro-inflammatory cytokines
adaptive immune response to herpes infection:

(4)
1. chemokines => T cells to site of inflammation

2. phag. by immature monocytes

3. killing by NK's via IL12

4. AB production
one way that herpes combats the host is by:
spreading cell-to-cell to evade AB's
diagnosing HSV infectoin:

(2)
1. look for CPE in affected tissue

2. ELISA
**treatment of HSV/VZV:**
1. acyclovir (ACV)

2. related nucleoside analogs

3. forcarnet
**how does ACV treat a herpes infection?**
P'n by viral thymidine kinase => enters nucleus => incorporated into viral DNA during elongation

=> missing 3' OH = can't form a phosphodiester bond => no elongation
how does foscarnet work?
it's a pyrophosphate analog that

binds directly to the herpes virus DNA Polym, inactivating it
Resistance to ACV is achieved by:
**absence of reduction of viral thymidine kinase**

=> DNA elongation proceeds
R to ACV occurs almost exclusively in:
severely immunocompromised pts
if viral thymidine kinase is reduced (rather than absent), it can be overcome by:
a higher dose of ACV
HIV falls under the ____________ family
lentivirus
lentiviruses can infect:
non-dividing cells
HIV comes in 2 forms; of the two, HIV1 is far more:
pathogenic

- very diverse/variable too
HIV features:

(4)
1. ss RNA

2. enveloped

3. nucleocapsid too

4. 2 copies of genome
***critical factors of HIV virulence:***

(2)
1. RT, integrase, protease

2. gp120, gp41
what is gp120 necessary for?
***binding of CD4 receptor***

and secondary receptor too
what is gp41 necessary for?
fusion of the HIV mlcl with the host cell
**HIV: 3 kinds of transmission:**
1. sexual

2. mother to child

3. parenteral
3 kinds of mother-to-child HIV transmissions:
1. in utero

2. peripartum (around time of birth)

3. breast feeding
3 parenteral transmission of HIV:
1. IVDU

2. needle stick

3. blood transfusion
**life cycle of HIV:**

(5)
1. entry via gp120, gp41

2. reverse transcription

3. integration of HIV DNA into human chromosome

4. protease cleavage to release

5. maturation once it's budded off
***HIV binds specifically to:***
CD4 receptors

- and then to either CCR5 or CXCR4 receptor
HIV replication/transcription ~~
TONS of mutations and recombinations

=> huge diversity
(HIV tends to enter dividing cells =>
host machinery is co-opted immediately, to replicate the virus)
***acute HIV infections: virus enters => ***
encounters susceptible cells (either dc's or CD4+'s)

=> travels to the gut (no matter route of transmission)

=> depletes CD4+/CCR5+ cells in the gut

=> spreads to other tissues (LN's, blood, CNS)
**the majority of CD4+/CCR5+ cells reside in:***
the gut
the initial AB response to HIV is:
weak and ineffective
host response to HIV =

(4)
innate defensins, II, HIV-specific AB's, T cells
latency of HIV: during an acute infection, HIV can persist in some:
CD4+ cells

=> if these cells divide, you now have more copies of HIV, in the very cells that are supposed to eliminate
why is there no cure for HIV?

(3)
1. rapid rates of mutations

2. HIV infects the cells that are responsible for eliminating it

3. latency means we can't kill it off
the rates of HIV disease progression vary widely; the average is:
10 years

- depends a lot on both viral AND host factors
**only ONE chromosome encodes all of the host response factors to HIV:**
chrom. 6
initially, HIV uses ________; then, it mutates to use ________
CCR5;

CXCR4
what 2 factors determine the potential to develop AIDS?
1. HIV load

2. CD4+ count <200
HIV is diagnosed with:
ELISA
ELISA is VERY:
sensitive AND specific for HIV
**a positive ELISA test must be confirmed with:**

(3 options)
1. Western blot

2. RNA PCR

3. DNA PCR
target testing ~~
testing a specific hiigh-risk group
signs/symptoms of acute HIV infection =

(2)
1. flu-like symptoms

2. PE flags
7 PE flags for HIV:
1. oral thrush

2. Karposi's sarcoma on the heel

3. leukoplakia

4. shingles

5. chelitis

6. seborrheic dermatitis

7. severe HSV inf
infections associated with HIV (if CD4+ >200):

(3)
1. STI's

2. TB

3. strep pneumoniae
TB is HIV patients: the lower the CD4+ count,
the LESS typical TB looks

- doesn't form granulomas

- PPD's are often false neg's

- but response to TB therapy is the same
with AIDS, secondary infections tend to be:
bugs of LOWER pathogenic potential
***most common opportunistic infection in AIDS patients = ***
PCP
PCP stands for:
pneumocystis jiroveci pneumonia

(fungus)
nearly ALL AIDS pts have:
PCP
hallmark of PCP =
SOB/desat
cryptococcus infection following AIDS =>
meningitis
3 other opportunistic infections following AIDS:
1. CMV reactivation

2. Myco TB

3. Myco avium
lots of cancers occur as a results of HIV infection; common one =
Kaporsi's sarcoma
KS is caused by:
HHV-8
AIDS-related cancers of the CNS:

93)
1. toxoplasmosis

2. primary CNS lymphoma

3. PML
PML (a leukemia) is caused by:
the JC virus
goal of HIV therapy =
suppress replication
if HIV isn't replicating, it can't:
mutate
HIV mutates at a rate of:
2000 x's a day
***HAART =
combo antiviral therapy
combos of drugs for HIV are necessary for:
survival

(except for the very few)
these days, HAART comes in the form of:
3 meds in one pill, once daily
HIV therapy DOES:
increase CD4+ cells

- initially a rapid increase, then a gradual one
5 targets of inhibition when treating HIV:
1. attachment (via gp120, gp40)

2. fusion

3. RT

4. integrase

5. protease
RT, integrase, and protease are all:
excellent targets, b/c humans don't have them
inflammatory reconstitution syndrome =
systemic, prolonged fever due to reawakened host response to pathogens
latency of HIV =
we can't cure it

- stop therapy => HIV comes out of hiding and replicates again
R IS an issue in:
HIV meds
HPV features:

(3)
1. DNA in circular episome

2. common in mammals

3. cause warts
the HPV replication cycle is closely associated with:
the differentiation state of the epithelial cell
HPV infection: microwound =>
access to basal epithelial cells

=> infection of basal cells

=> expression of viral DNA as cells differentiate

=> replication

=> release at the top (stratum corneum)
which HPV prot's are responsible for viral DNA replication?
E1/E2 heterodimer
what does HPV's E2/E2 homodimer do?
suppresses HPV's E6 and E7 expression
2 different warts that HPV causes:
1. condylomas

2. skin warts (on hands and feet)
condylomas are _______ warts; they appear in:

(2)
**mucosal** warts

==> genitals, oropharynx
HPV warts tend to resolve:
quickly
in order for HPV to infect, there MUST be a:
break in the skin
it's VERy common to have had:
HPV
in RARE cases, HPV can cause:

(2)
1. cervical cancer

2. oral squamous cell carcinoma
cervical cancer ~~

(2)
1. discharge and abnormal vaginal bleeding

2. dysplasia (enlargement) or neoplasia
cervical cancer is usually a:
squamous-cell carcinoma

- sometimes adenocarcinoma (of glands)
***first step to cancer from HPV infection =
***integration of HPV episome into host genome***
**what happens with integration of HPV episome into host genome?**
**E2/E2 gets disrupted => E6, E7 NOT suppressed
***what happens when E6 and E7 are NOT suppressed?***

(2)
1. host cells continue to divide

2. apoptosis does NOT occur
only the "high-risk" serotypes fail to suppress E6, E7; that's why:
cancer from HPV infection is rare
diagnosis of HPV =

(2)
1. genital warts

2. cervical changes from pap smear
vaccines for HPV =

(2)
1. Gardasil

2. Cervarix
treatment of HPV infection =
removal of warts
WBC’s in the stool ~~
**inflammatory diarrhea**
only Shigella dysentariae releases:
Shiga toxin
syphilis damages cells ==>
cardiolipin
lytic infection = normal inf =
virus replicates a lot, eventually lysing the cell in release
clinical symptoms of lytic infections are the result of:

(2)
1. tissue damage due to viral replication

2. immune response to infection
lytic infections tend to last:
2-14 days
**chronic infections ** =
continual infection = long lytic infections

- viruses are released from cells, but cells DON'T lyse
**chronic infections are a subset of lytic infections; main difference between the two = **
time to clear

- lytic ~ <2 weeks

- chronic ~ wks/mths/years
2 types of chronic infection:
1. focal

2. diffuse
focal chronic infection =

(3)
1. carrier cells produce virus

2. infect neighboring cells

3. die, but neighboring cells continue the cycle
diffuse chronic infection =

(2)
1. viruses replicate in infected cells that also replicate

2. cells shed viruses for their lifetime
Hep C ~~
persistent (chronic) viral infection

- eventually leads to cirrhosis
***latency =
presence of viral nucleic acids in the absence of infectious virus
**difference between chronic and latent infections:**
chronic infections produce infectious viruses;

latent infections DON'T
3 phases of latency:
1. getting in

2. maintenance (staying in)

3. reactivation (getting out)
establishment of latency (getting in) ~~
virus stops expressing proteins
**while BOTH RNA and DNA viruses can become latent, the viral genome in *either case* is maintained as:**
DNA
provirus =
latent DNA *integrated* into host genome

e.g. HIV
episomal latency =
latent viral DNA is maintained extra-chromosomally

- e.g. herpes
latently-infected cells tend to:

(2)
1. proliferate less

2. have less metabolic demand
latency last for:
months to years

- long
reactivation of latent virus occurs in response to:
1. stimuli for host cell to diff/prolif

2. cell stress that would cause cell death - get out of there
diagnosis of latent viral infection has to be via:
PCR of the viral genome

- searching for antigen or infectious virus is either misleading or pointless
latent infections CAN cause diseases, in the form of:

(2)
1. cancer

2. lympho-proliferative disorders (too many WBC's)
latent EBV =>
cancer
latent herpes =>
KS
latent viruses are transmissible via:
transplants

- latently-infected cells get transferred to recipient
best example of a latent virus that reactivates after a transplant:
HCMV

- delayed onset is worse than onset within a year
a cure for latent viruses should focus on those patients in whom:
the latency keeps springing up into active infection

- leave the others alone
one method of treating HIV latency =
forcing it to reactive,

=> hit it with antivirals to prevent integration/replication

=> progressive rounds of treatment to eliminate latent reservoir
leading disease due to nosocomial infection =
pneumonia
placement of catheter outside of the OR =>
increased risk of nosocomial infection
HAP =
hospital-acquired pneumonia
VAP =
ventilator-associated pneumonia
HCAP =
health care-associated pneumonia

- contracted in the outpatient/home-care setting
ranking of most risk for MDR and m/m:
HAP/VAP > HCAP > CAP
aspiration = huge risk for:
nosocomial penumonia
VAP prevention bundle:

(4)
1. 30-45 degress

2. consider extubating ASAP

3. prevent peptic ulcer disease/ reflux

4. prevent DVT
bloodstream infections: major risk =
use of intravascular devices

e.g. central line
3 major organisms that exhibit R in hospitals:
1. Staph aureus

2. VRE

3. C. diff
Staph aureus ~~

(3)
BSI's, pneumonia, surgical infections
Staph aureus is implicated in:
nearly every nosocomial infection
risk factors for developing Staph aureus R:

(3)
1. ab use

2. prolonged stay

3. proximity to patients with MRSA
Staph aureus are actually:
normal flora of the nasopharynx
both Staph aureus and VRE are transmitted via:
hands/surfaces
VRE =
vancomycin-R enterococci
VRE aren't:
normal flora
C. diff =
normal flora of GI tract
to which bact. does Toxin A and Toxin B belong to?
Clostridium difficile