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20 Cards in this Set
- Front
- Back
genome mutation vs chromosome mutation
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genome - aneuploidy, chromosome missegregation
chromosome - translocation deletion insertion, much less frequent then genome mutations |
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two ways gene mutations can arise
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errors in normal dna processing
and mutagens - increase rate of mutation by as much as 1000 fold, usually the mutation is not fixed unlike replication errors |
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Neurofibromatosis
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mutation in NF1 gene, nonsense mutation
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RNA splicing mutation
2 kinds |
Mutations at splice donor or acceptor sites,
mutations that create an alt donor/acceptor site |
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Taysachs - what kind of mutation causes this?
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RNA splicing mutation
mutation at the splice site causing no splicing |
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Tay sachs - what gene is effected?
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hexosaminidase A gene, splice site doesnt work, 4 bp insertion, frameshift
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name a disease of
Nonhomologous recombination |
gene deletions in growth hormone family causing a deficiency,
deletion of an alpha globin gene in alpha thalassemia |
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name a disease of chromosome translocation
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the philadelphia chromosome, leukemia
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frequency of genome mutation
chromosome mutation Gene mutation |
genome - 10^-2 per cell division
chromosome - 6 X 10^-4 per cell division Gene mutation - 10^-10 base pair mutation per cell division 10^-6 locus mutations per generation |
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what is a cryptic site?
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mutations that create alternative donor or acceptor sites
cryptic splice acceptors (lengthened) and cryptic splice donors(shortened) |
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for each list whether the mutation is in a coding region or a noncoding region, and how many repeats are needed for mutation
huntingtons kennedy fragile X myotonic dystropy |
Huntingtons - coding CAG, 37-100 for mutation
KEnnedy disease - coding CAG 40-55 for mutation Fragile X - 5'UTR CGG, 200-1000 Myotonic dystrophy - 3'UTR CTG, 50-4000 |
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when you have change of function, what three things can happen to the proteins
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increase expression
increase ability of protein or enzyme increase half life |
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see page 393
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kj
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large deletion
how does it change a S blot, a N blot the prot and function |
SB - see a change + or -
NB - generally decrease mRNA b/c less stable no protein unless the deletion was an intron no function |
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pt mutations or small deletions
SB NB prot funxn |
SB - no change, unless changes the restriction enz site
NB - no change |
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mutation in promoter/enhancer
sb nb prot function |
sb - no change
nb - changes nb, decreased mRNA, still likely to be the same size prot - decrease funxn, decrease |
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CAP site
POLY A site |
same as promoter mutation
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loss of splice site
sb nb prot funx |
sb - no change
nb - change, bigger prot - most likely see a truncation due to stop codon, degraded funxn - decrease |
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splice site, cryptic site
sb nb |
sb no change
nb normal/larger or shorter decrease prot decrease funxn |
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can you have a missense mutation in an intron?
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no, splicing, no introns in protein
missense nonsense silent and frameshift can only be seen in coding regions (not UTR's either) |