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20 Cards in this Set
- Front
- Back
restriction enzymes
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DNA cutting ezymes; cuts phosphodiester bond that joins adjacent nucleotides
bind to, recognize, cut DNA w/ specific sequences of bases, usualy 4 or 6 nucleotides |
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plasmid DNA
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circular form of DNA
primarily found in bacteria; extrachromosomal b/c present in bacerial cytoplasm and bacterial chromosome; self replicating |
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Cohen and Boyer
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cut plasmid and joined together fragments from each using DNA ligase to creat new, hybrid
boyer: cutting and sticking cohen: insertion and replication of plasmid DNA |
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ligation
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=sticking DNA together
sticky ends b/c can form base pairing H bonds, seals ends 1. 2 pieces of DNA w/ complimentary ends 2. H bonds form b/w complimentary bases 3. ends are sealed by ligase |
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how to get piece of DNA into a cell
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-electroporation
-chemical treatments -lipid based systems -microinjection -particle bombardment -viruses |
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vector
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carrier for foreign/target DNA
pieces of DNA that can accept,carry, replicate other pieces of DNA |
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restriction mapping
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cloned DNA separated and visualized showing sites taht are cut by specific restriction enzymes
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gel electrophoresis
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separationg of cloned fragmens on gel according to size
migrates from - to + smaller pieces move faster (toward + end), travel furthest |
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southern blot test
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1. gel electrophoresis: separate fragments by size (see which fragments contain novel gene)
2.treat with alkaline solution to denature DNA, transfer fragments to nitrocellulose (blotting) 3.hybridize base pairs using piece of labeled DNA as probe |
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probe
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single stranded fragments of DNA or RNA w/ complementary ccode for specific sequence of bases
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RFLP
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cuting DNA with number of restriction enzymes and getting fragments of DNA which vary in size from individual to individual
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VNTRs
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cutting DNA at specific sites, so fragments collected are various sizes as result of individual's number of repeats in specific introns. can use PCR to amplify amount of DNA in sample
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DNA fingerprints
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extract DNA, cut using restriction enzymes, separate fragments by size on a gel, transfer to nitrocellulose (southern blot), hybridize using a specific radioactive VNTR
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PCR
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=making lots of copies of a piece of DNA
1.separate strand of target by denaturing (heating) 2.add 2 specific primers that recognize/hybridize with either end of target and go in converging directions 3.again heat to denature the 4 strands 4.lower temp to allow primers to anneal (hybridize) to all 4 strands 5.raise temp again to synthesize polymerase |
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francis collins
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human genome project
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craig venter
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celera
used public info to push public effort of human genome project criticized by many, watson |
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what mRNA tells us
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what genes being expressed at what levels
level tells us which proteins being produced and functioning |
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cDNA
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complementary DNA
stable, can be measured quantitatively |
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proteome
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=all the protein contained w/in a cell or organism
reflect state of a biological system |
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bovine heart proteins
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separate proteins according to size and acidity
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