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14 Cards in this Set

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Somatic Diversification Theory
Ig repertoire is generated from limited number of gene segments.
Where does somatic recombination of DNA occur?
B cells
How was somatic recombination discovered?
Southern Blot comparing non-lymphoid and B cells

Add PIcture...
Light Chain
has one V(L) and one J(L) segment.
Heavy Chain
Has one V(H), one D(H), and one J(H)
Enzymes involved in recombination
Enzyme complex = VDJ recombinase

RAG1 = recombination activation genes
RAG2 = code for the lymphocyte-specific components.
Knockout Mouse Technique
1. A mutant version of the preselected target gene is constructed in the lab.
2. Knockout is achieved by swapping the functional copy of the gene for the mutated version in mouse ES cells.
3. Mice then are derived from these ES cells carrying the same mutation in every cell.
4. An additional round of breeding is required to produce mice that are homozygous for the mutation.
AB diversity is generated by 4 main processes
Before Ag exposure (is random)
1. Combinatorial Diversity (VDJ choices) = multiple inherited gene segments are used in different combinations.
2. Junctional diversity (imprecise joining) = Variable addition and subtraction of n.t. at junctions between gene segments contributes to diversity in the 3rd hypervariable region.
3. H and L combination

After AG exposure
4. Somatic hypermutation = Accounts for further diversity
TCR Gene Rearrangement
1. Combinatorial Diversity
2. Junctional Diversity
3. H and L Combination

NOTE: unlike Ab gene rearrangement, there is no somatic hypermutation. Each individual controls their TCRs.
Structural Variation in Ig Constant Regions
The pathogen drives the "switch" of cassettes that are the constant regions.
Why is it beneficial to have multiple copies of V, D, and J gene segments?
creates diversity
Why is it not a good idea to have T cells that can somatically hypermutate their TCRs?
This is the main way we prevent auto-immune issues.
Which antibodies are co-expressed?
IgM and IgD can be expressed simultaneously on the cell surface.
Ab functional specialization
Controlled by the constant regions.

- C' activation
- Allows binding to different Fc receptors.