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25 Cards in this Set

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gene therapy: What is it ?
Identification, isolation and repair of naturally occurring genetic mutations in
human alleles ...
Where did the idea arise ?
Proposed as a possibility shortly after the discovery of genes (Science Fiction)
Why bother ?
Unlike treatment options, gene therapy has the potential to cure a
disease by repairing the source of the problem...
Note: Gene therapy research is well-funded by governments and largely
ignored by pharmaceutical corporations
Has it worked ?
Gene Therapy has been successfully applied in (very) limited clinical settings
(ie. hemophilia, diabetes)
In principle, any disease can be targeted for gene therapy.
In practice, we need to know the following:
Does the disease arise from a mutation in one (or a few) genes?
(5)* Will a normal gene solve the problem (dominant negative mutations)?
(6)* Can we deliver a normal gene to the affected tissue?
At present, diseases that result from a point mutation in a single gene that affect
easily accessible tissues (ie. epidermus, blood) are the best candidates for gene
therapy
Hereditary Diseases are generally divided into ______ and _______
single gene; polygenetic
Distinguish Dominant from Recessive in terms of mutation and disease
- Dominant mutations only require a single mutant allele to cause a phenotype
- Recessive mutations require mutations in both alleles for a phenotype
individuals with a single mutant allele (carriers) are healthy but may pass the
disease to their progeny
Describe Linkage pattern in terms of mutation and disease
a) Autosomal (non-sex linked) – typically follow normal Mendelian inheritance
pattern
b) X-linked – fathers always pass to daughters; never pass to sons: mothers
may pass mutation to sons and daughters (50%)
c) Y-linked – fathers always pass to sons
d) Mitochondrial – maternal inheritance; always passed from mother to
progeny
give an example of an Autosomal Dominant disease
Huntington's Disease (neurological disorder)
give an example of an Autosomal Recessive disease
Cystic Fibrosis (breathing and digestion), Tay-
Sachs (impaired ganglioside degradation), Sickle Cell Anemia
(hemeglobin polymerization)
give an example of an X-linked Dominant disease
Aicardi Syndrome (brain development)
give an example of an X-linked Recessive disease
Muscular Dystrophy (muscle wasting and more),
Color Blindness, Hemophilia A
give an example of a Y-linked disease
male infertility
give an example of a Mitochondrial single gene disease
Leber's Hereditary Optical Neuropathy (loss of central
vision)
Why are Polygenetic Diseases a poor choice for gene therapy?
Hereditary Diseases associated with multiple genes, lifestyle and
environmental factors
Poor choice for gene therapy as require knowledge of all genes involved
- Environmental and lifestyle factors make identification of genetic mutations
difficult
- Inheritance patterns are complex and non-Mendelian (tend to run in families
but largely unpredictable)
Examples include
autism, hypertension, obesity, cleft palate
some forms of cancer, diabetes and heart diseases
Identification of mutant gene(s) is largely dependent upon________?
determining
inheritance patterns:
Still need to verify mutation gives rise to disease
Techniques: homologous recombination, gene silencing, deletion
Problem: must use model systems – tissue cultures and animal models
Large eucaryotic genes are still non-trivial to clone (due to processing)... why?
Involves generating many copies of gene (PCR) and transferring gene to an
organism that rapidly replicates (eg. bacteria, virus, yeast, insect)
Name and describe 3 means of Detecting Gene Expression??
(1) Western Blot – use of specific antibodies to detect presence of
gene product in a given tissue type
Requires purified protein sample to raise antibodies
(2) Transcriptomics – use of complimentary mRNA array (gene chip)
to detect presence of specific gene transcription
Requires complete set of complimentary mRNA
(3) Proteomics – separation of cellular protein followed by protein
Mass Spectroscopy based identification or fingerprinting
Requires complete set of protein sequence information
in terms of gene expression, there are 3 types categorized by their distribution... what are they?
(1) Housekeeping – genes expressed in many or all tissue types
Associated with essential cellular functions (transcription, translation,
replication, cellular metabolism)
(2) Tissue Specific – genes expressed in a single or few tissue types
Associated with differences between tissue types
(3) Developmental – genes temporally expressed at specific times during
life cycle
Tissue differentiation, sexual maturity
Note: Tissue specific and developmental gene may be secreted
_______ expressed in a single tissue type are the best _________ targets
Secreted genes;gene
therapy
A repaired gene is often but not always sufficient to repair function... what are 3 reasons for this?
(1) Dominant negative mutations
Mutant gene product may interfere with normal gene product function
eg. both mutant and normal protein can bind to target but only the normal
protein can stimulate target to function
(2) Disrupted regulation
Presence of multiple gene copies (mutant and normal) may prevent the
production of sufficient quantities of normal gene product
(3) Unwanted activity
Mutant gene products may produce unwanted metabolites that are ultimately
responsible for disease
Gene delivery is the Key to successful gene therapy
Successful gene delivery involves:
(1) Targeting: repaired gene must specifically enter the correct cells
(2) Activation: repaired gene needs to enter nucleus and be successfully
transcribed in response to regulatory cues
(3) Integration: for long term protection, the repaired gene may need to
integrate into the genome and be replicated
(4) No side effects: the introduction of any foreign biological material runs
the risk of being toxic, damaging the cells or stimulating an immune
response
There are 3 approaches to gene delivery (delivery vectors) - briefly describe them
Ex vivo – Tissue is removed, repaired gene is delivered and tissue is returned
Pros – highly specific, can test for activity and integration
Cons – cannot introduce repaired gene into all cells of a given tissue;
Only useful for secreted gene products – generally successful
In vivo – Viral vectors
Pros – Good at targeting specific cell types and integrating into DNA; can be
modified so they do not replicate and destroy cell
Cons – Size limitations, Side effects (Immune response)
In vivo – Non-viral vectors (closed, circular DNA)
Pros – No size limits, no immune response
Cons – Less specific, less efficient integration
Can be used for all types of gene therapy
What are some new approaches in gene therapy?
Repairing Genes
Splicesome Mediated RNA trans-splicing
Introduce gene that produces RNA designed to
(1) block normal splicing reaction to mutant exon
(2) promote splicing to repaired exon
Inactivate Mutant Genes (dominant negative fix)
Antisense RNA – Introduce gene that produces RNA complementary to mutant gene
mRNA
Forms an RNA duplex that cannot be translated
Triple Helix – Introduce DNA that specifically binds to major groove of mutant gene and
prevents transcription
Ribozymes – Introduce gene that produces catalytic RNA targeting mutant gene mRNA
How is gene therapy like today's science fiction?
Gene therapy was viewed as Science Fiction 40 years ago when the
genes were shown to be basic units of heredity
Gene therapy is now a reality and there are many research programs aimed
at making gene therapy approaches widely applicable (still years to go ...)
So what can we look forward to (be afraid of?) in another 40
years ....
Application of Gene Therapy approaches to germline
“Designer” progeny – currently being proposed as means to prevent
genetic diseases; short step to incorporating “beneficial” genes
associated with increased lifespan, resistance, etc
Cellular Repair
Primarily targeting age related accumulation of mutations