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28 Cards in this Set

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  • Back

Permeability of inner membrane

Only to H20, CO2, and O2. Not NADH. Shuttles required

Mal-Asp shuttle

Uses NADH only.


Oxaloacetate becomes aspart and ak, which go to cyt. Asp. becomes oxaloacetate, then malate at cost of, and then it goes back in. Then malate becomes oxaloacetate, which releases NADH into mitochondria.

Glycerol Phosphate shuttle

Dhap converts into Gap, which costs NADH. Then GAP converts to DHAP, done by G3P. The dehydrogenase complex for this has FAD inside, and it becomes FADH to during this conversion.

Other molecules transported:

ADP-ATP translocators send ATP out to get ADP into the matrix.


Phosphate transported in via the PO4/H gradient



Cofactors and Prosthetic groups

NADH, FADH2, Coenzyme Q, Iron Sulfur, Cytochromes (Heme)

NADH as cofactor

Water soluble, carries 2 electrons

FADH2

Water soluble, carries 1-2 electrons

Coenzyme Q

Free lipid soluble, carries 1 to 2, incomplete reduction can lead to free radicals

Iron-Sulfur

Protein bound carrier. Carries 1 electron. Sulfur binds, iron stabilizes.

Cytochromes

Protein bound electron carriers, contain heme, which is large porphyrin ring. 1 Electron transferred, present in inner mit. membrane.


Four types: B, C1, C, AA3

Redox Potential

When half molecules are reduced, half oxidized. Electrons pass freely from low redox to high redox.

Complex 1

(NADH-Coenzyme Q oxidoreductase)


FMN takes electrons from NADH, transfers to Fe-S, gives them to CoQ.


Protons move from matrix to IMS.



Complex 2

(Succinate-CoQ oxidoreductase)


No proton transfer occurs here, part of TCA. Electrons come from succinate bound to FADH2, go to FeS clusters, given to Coenzyme Q.

Complex 3

Contains cytochrome b, c1, and one fes protein. Pumps hydrogen from the matrix to the intermembrane space, moving an electron from the Q to the Cytochrome c.

Q pool

Q pool explains how a cytochrome has two electrons but moves one at a time. One will be transferred out with two hydrogens, but one will cycle into the Q pool, and then be released with two protons in the next cycle.

Complex 4

(Cytochrome oxidase)


Contains cytochromes a and a3. Electrons move from cytochome c into copper ions, to a and a3, then another copper ion, and finally into oxygen, causing water to be produced.

Oxidative Phosphorylation

The energy released during each electron transfer is used to pump out proteins from matrix into ims. Complexes 1 3 and 4 will move H from membrane to space, while 5 will move them from space out. Note 2 does not do this at all.

Complex 5

Drives phosphorylation of ADP to ATP. 2.5 ATP per NADH and 1.5 ATP per FADH2. Made up of the rotor and the peripheral membrane. The peripheral membrane is water soluble, and what makes the ATP.

Rotary engine and ADP/ATP

Has three sites: L, T, and O.


When rotated to L, ADP and Pi enter and are ready for synthesis. With energy,

Site-specific inhibitors for Complex 1

Rotenone and Amytal

Site-specific inhibitors for complex 3

Antimycin A

Site-specific inhibitors for complex 4

Carbon monoxide, Cyanide, and Sodium Azide

Phosphorylation inhibitors

Oligomycin, blocks Fo (the rotor)

Uncouplers

DNP, FCCP will both uncouple the proton gradient.

DNP uncouplers effect

Increases the permeability of the inner mitochondrial membrane to H. ETC will work harder because of the decrease in PMF. This is why DNP was a diet pill.

Brown Adipose Tissue

Newborn mammals that lack fur such as humans contain brown fat in neck and upper back. Generates heat by uncoupling via a protein called thermogenin.

Disadvantage of Aerobic Metabolism

Produces reactive oxygen species


Superoxides, Hydrogen peroxide, and Hydroxyl radical.

Antioxidant mechanisms

Biological enzymes that help neutralize free radicals.


Superoxide dismutase, catalase, and glutathione peroxidase